NO13G02310, NO13G02310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02310 vs. NCBI_GenBank
Match: EWM21890.1 (werner syndrome exonuclease [Nannochloropsis gaditana]) HSP 1 Score: 369.4 bits (947), Expect = 1.800e-98 Identity = 182/291 (62.54%), Postives = 225/291 (77.32%), Query Frame = 0 Query: 79 LQSADTDVPIAEYLEGGQLSIDSIP---TRMVEIPCPFSHSGPRQYETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIYQEFYRRGLLDRGMLKEMMETWLISSEDDNRKRARSLALESDVLRRLYTRLQGESPSKSR 367 L S + P+AEY+EGG LS S TRM+E+ CPFS+ R ETVKVAVIQ TT ANYWC RL H +RKE GP GG GA+GLD+EW+P+F+ Q A R+A+LQLSGPGLCL+IQLQ+L H+PRQL ++L DPTL KVGVSV++DLA+LR DWG+ S +VDVGRVGGR+F PFR +S+Q + +LWGI LPK +IRLGNWE PELS++QVEYAALDAMAGRAIYQ F+RRGLLD+ L+E+M W +SS++ + KRARSLALESD+LR LY R G P++ R Sbjct: 58 LHSVQIEEPVAEYMEGGPLSRQSDSCNLTRMIEMTCPFSYG--RGRETVKVAVIQGTTAANYWCDRLCHRVRKELGPGGGDGAIGLDVEWRPSFKPNQPARRSAILQLSGPGLCLIIQLQRLSHIPRQLGRLLRDPTLPKVGVSVEEDLARLREDWGLSSRCFVDVGRVGGRVFPEGAPFRIISLQKLMGALWGICLPKPQSIRLGNWETPELSSRQVEYAALDAMAGRAIYQAFHRRGLLDKVTLEELMLKWSLSSDEKDLKRARSLALESDLLRHLYVRFTGLQPTRPR 346
BLAST of NO13G02310 vs. NCBI_GenBank
Match: OSX79183.1 (hypothetical protein BU14_0085s0034 [Porphyra umbilicalis]) HSP 1 Score: 117.9 bits (294), Expect = 9.500e-23 Identity = 65/168 (38.69%), Postives = 105/168 (62.50%), Query Frame = 0 Query: 148 KESGPDGGGGAVGLDLEWKPTFRAR-QAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIYQEFYRRG 315 ++ G + G +G+D EW T + + +S+ +LQLS LVI L +LR VP QLR +LA+P++ KVG +V D AKL RD+G+ + Y+++GR+ + P ++S+ + +L DL K +++R+ +WEH ELS ++V+YAALDA AG A+Y++ G Sbjct: 618 RDLGLENGPVVIGMDAEWTVTAGPKGRTSSKLQLLQLSSRSETLVIHLSRLRSVPHQLRSLLANPSVFKVGKNVGGDAAKLLRDYGVKTERYLELGRLASKRQL--VPSGSISLVALTRALLRRDLNKDESLRMSSWEH-ELSPEKVQYAALDAYAGLALYEKIQEMG 782
BLAST of NO13G02310 vs. NCBI_GenBank
Match: PHT98721.1 (hypothetical protein BC332_32380 [Capsicum chinense]) HSP 1 Score: 115.5 bits (288), Expect = 4.700e-22 Identity = 62/185 (33.51%), Postives = 102/185 (55.14%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T+ V AN W S++ L K +G VGLD+EW+P F + + +++A LQL +CL++QL L +P+ L+ LA+P + VGV V +D+ KL+ ++G V S D+ V + + ++++A+ + G+ +PK + I + NWE +LS QVEYA +DA A I Sbjct: 24 QTIVTTVTNKAAVANEWASKM---LTKYAGKQ---TVVGLDIEWRPNF-SPYSNNKSATLQLCIDYMCLIVQLLHLDQIPQTLKNFLANPNFIFVGVEVGEDILKLKNEYGFVCSNKADIRDVANNKW--PGRYSLPGLKDLASDICGLSVPKPEHISMSNWEAMDLSISQVEYACIDAYASYKI 199
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_016581901.1 (PREDICTED: Werner Syndrome-like exonuclease [Capsicum annuum] >PHT63068.1 hypothetical protein T459_33088 [Capsicum annuum]) HSP 1 Score: 114.8 bits (286), Expect = 8.000e-22 Identity = 62/185 (33.51%), Postives = 102/185 (55.14%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T+ V AN W S++ L K +G VGLD+EW+P F + + +++A LQL +CL++QL L +P+ L+ LA+P + VGV V +D+ KL+ ++G V S D+ V + + ++++A+ + G+ +PK + I + NWE +LS QVEYA +DA A I Sbjct: 24 QTIVTTVTNKAAVANEWASKM---LTKYAGKQ---TVVGLDIEWRPNF-SPYSNNKSATLQLCIDYMCLIVQLLHLDQIPQTLKNFLANPNFIFVGVEVGEDILKLKNEYGFVCSNKADIRDVAKNKW--PGRYSLPGLKDLASDICGLSVPKPEHISMSNWEAMDLSISQVEYACIDAYASYKI 199
BLAST of NO13G02310 vs. NCBI_GenBank
Match: PFX33179.1 (40S ribosomal protein S13 [Stylophora pistillata]) HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21 Identity = 67/197 (34.01%), Postives = 104/197 (52.79%), Query Frame = 0 Query: 114 SHSGPRQYETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQ---AASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIY 308 +H+ P E V+V QD A W K + D AVGLD+EWKP F++ + S+ AVLQLS G CLV+ L ++ P+ L+ +L++ +LKVG + D+ KL RD G+ G +D ++ + + + + ++ +A G DL K ++ + NWE L+ +Q+ YAALDA G IY Sbjct: 318 THTLPYPAEGVEVQYTQDPIEAEAWL--------KNNIIDCSAQAVGLDIEWKPQFKSTKDGGVESKPAVLQLSVEGSCLVLHLCHMKSKPKLLKNVLSNKMILKVGSGILQDVTKLNRDTGLSCKGLMDTQKMAKSIGIPVS--QKLGLKALAKHFLGFDLEKPKSVSMSNWERRPLTLEQIHYAALDAWIGLKIY 504
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_022804760.1 (uncharacterized protein LOC111341976 [Stylophora pistillata]) HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21 Identity = 67/197 (34.01%), Postives = 104/197 (52.79%), Query Frame = 0 Query: 114 SHSGPRQYETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQ---AASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIY 308 +H+ P E V+V QD A W K + D AVGLD+EWKP F++ + S+ AVLQLS G CLV+ L ++ P+ L+ +L++ +LKVG + D+ KL RD G+ G +D ++ + + + + ++ +A G DL K ++ + NWE L+ +Q+ YAALDA G IY Sbjct: 318 THTLPYPAEGVEVQYTQDPIEAEAWL--------KNNIIDCSAQAVGLDIEWKPQFKSTKDGGVESKPAVLQLSVEGSCLVLHLCHMKSKPKLLKNVLSNKMILKVGSGILQDVTKLNRDTGLSCKGLMDTQKMAKSIGIPVS--QKLGLKALAKHFLGFDLEKPKSVSMSNWERRPLTLEQIHYAALDAWIGLKIY 504
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_015162977.1 (PREDICTED: Werner Syndrome-like exonuclease [Solanum tuberosum]) HSP 1 Score: 112.5 bits (280), Expect = 4.000e-21 Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T++ V AN W + + L K SG VGLD EWKP F + +++A LQL CL++QL L +P+ L++ LA+P VGV V +D+ KL+ +G+V S VD+ V + F ++++A + G+ +PK + + NWE ELS QVEYA +DA A I Sbjct: 23 QTIETTVTNKAFVANEWATSM---LSKYSGKQ---TVVGLDNEWKPNF-SPYTNNKSATLQLCIDNTCLIVQLFYLDEIPQTLKKFLANPNFTFVGVEVGEDILKLKNQYGLVCSSQVDIRDVAKNKW--PGRFSRPGLKDLANEICGLYMPKPKHVSMSNWEARELSVSQVEYACIDAYASYKI 198
BLAST of NO13G02310 vs. NCBI_GenBank
Match: OMO64017.1 (hypothetical protein CCACVL1_22100 [Corchorus capsularis]) HSP 1 Score: 111.7 bits (278), Expect = 6.800e-21 Identity = 62/185 (33.51%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 + ++ V + + + W S + + G VGLD EW+P +R Q ++ A+LQL CL+IQL L H+PR LR L DP + VGV V D AKLR ++G+V S DV + + N R ++++A+++ G+ +PK + + NW+ L+ Q+EYA +DA A I Sbjct: 21 KNIETTVTDEASVVDAWISNIRSMYH------GQQLIVGLDSEWRPNYRKYQ-NNKTAILQLCIETRCLIIQLFYLEHIPRSLRSFLGDPNVTFVGVEVASDAAKLRNEYGLVCSRTADVRELAMN-SWPSNFSRNPGLKDLASTVVGLSMPKQKRVTMSNWQSRVLNPLQIEYACIDAYASYRI 197
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_020191031.1 (Werner Syndrome-like exonuclease [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 111.3 bits (277), Expect = 8.900e-21 Identity = 64/187 (34.22%), Postives = 95/187 (50.80%), Query Frame = 0 Query: 115 HSGPRQYETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDV-GRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDA 301 H+ P + V DT A+ W R +R + P G G VGLD EWKP + + S+ A+LQL CLV+Q+ VP +R +L DP + VG+ V +D AKL D+G+V + VD+ GR L R + ++ A + G+ + K + + NWE +L QV+YA +DA Sbjct: 6 HTVPFGSALINTTVTSDTNAADEWVRR----VRAANDPAGRGLIVGLDCEWKPNY-SSWTTSKVAILQLCVGTSCLVLQMFYANRVPAAIRSLLGDPAVRCVGIGVGEDAAKLADDYGLVCAAPVDLEGRCNEYLGIGGLGRRRLGLKGYAREVLGMTMEKPRHVTMSNWERRQLEVAQVQYACIDA 187
BLAST of NO13G02310 vs. NCBI_GenBank
Match: ORX45280.1 (ribonuclease H-like protein [Hesseltinella vesiculosa]) HSP 1 Score: 110.5 bits (275), Expect = 1.500e-20 Identity = 63/184 (34.24%), Postives = 99/184 (53.80%), Query Frame = 0 Query: 160 GLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPF-----RTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIYQEFYRRGLLDRGMLKEMMETWLISSEDDNRK 339 GLD+EW+PTF + A++Q+ L+IQ+ Q++ P +L + L TL K GV++ D KL RD+G+ ++G VD+G++ ++ D P R S+ N+ A G LPK +RL NW P L+ Q+ YAA DA A A+YQ L + LK+ + +++ D +K Sbjct: 169 GLDMEWQPTFVKNAKQKKTALIQICNDHKVLLIQIGQMKEFPEELLRFLQSRTLYKTGVNITGDGNKLLRDFGICTNGLVDLGKMASKM---DTPSLHRIGRFRSLDNLTALFLGKRLPKDKGVRLSNWNAPFLNKYQIHYAANDAYASYALYQ------ALSKVTLKQKLPLSVVNIADHAQK 343 The following BLAST results are available for this feature:
BLAST of NO13G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02310 ID=NO13G02310|Name=NO13G02310|organism=Nannochloropsis oceanica|type=gene|length=2578bpback to top protein sequence of NO13G02310.1 >NO13G02310.1-protein ID=NO13G02310.1-protein|Name=NO13G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top Synonyms
Publications
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