NO13G02300, NO13G02300 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02300 vs. NCBI_GenBank
Match: XP_005854628.1 (nudix hydrolase [Nannochloropsis gaditana CCMP526] >XP_005856326.1 nudix hydrolase [Nannochloropsis gaditana CCMP526] >EKU20029.1 nudix hydrolase [Nannochloropsis gaditana CCMP526] >EKU21732.1 nudix hydrolase [Nannochloropsis gaditana CCMP526] >EWM21893.1 nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 3.000e-75 Identity = 142/221 (64.25%), Postives = 175/221 (79.19%), Query Frame = 0
Query: 23 SRGLKSAACLCLAASYSFSPVWLHLPATS---SSALRMSTGGSFCYRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLDNISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSKGTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEAWPRLIVCESGGKTVVKERGSAKVLCVLPDAKSVELVRSATPFS 241
SR L SAACLC A SF + P++S S+A+ M+ G FCY+YPRPSVTVDTL+FC + +K+LL++RGN+PFKG WALPGGFVD+DEGLD AAAREL+EET LD+ISFAQVG++G PGRDPRGHT+TVAY AFLLSS+G +AGDDA A FF FG LPPLAFDH+ II+E W RL+VC+ G TVVKERG+ +VLC LP A + ++VRS+ PF+
Sbjct: 9 SRTLISAACLCFTAPSSF----VLRPSSSRPASTAVGMAAQG-FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT 224
BLAST of NO13G02300 vs. NCBI_GenBank
Match: CBN75488.1 (ADP-ribose pyrophosphatase [Ectocarpus siliculosus]) HSP 1 Score: 179.1 bits (453), Expect = 1.600e-41 Identity = 95/192 (49.48%), Postives = 124/192 (64.58%), Query Frame = 0
Query: 41 SPVWLHLPATSS-SALRMSTGGS------FCYRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLDNISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSK--GTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEAWP--RLIVCESGGKTVVKERGSAKVL 222
+P LPA +S SA GG F Y++PRP+VTVD LI+ + +LLIKR NDPFKG WALPGGFVD++EGLD AA REL+EETG+ N + Q G++GDPGRDPRGHT+TVA+ A+ S +AGDDA+ A FFP +LP +AFDH +I ++W R GG V+++ S + L
Sbjct: 69 TPTASTLPAMASLSASAAGRGGDTAPDLPFRYQWPRPAVTVDCLIYALDEGKPWILLIKRKNDPFKGGWALPGGFVDQNEGLDAAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTITVAFMAWAPSKAACSARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQAL 260
BLAST of NO13G02300 vs. NCBI_GenBank
Match: GAX84232.1 (hypothetical protein CEUSTIGMA_g11655.t1 [Chlamydomonas eustigma]) HSP 1 Score: 167.5 bits (423), Expect = 4.900e-38 Identity = 94/177 (53.11%), Postives = 118/177 (66.67%), Query Frame = 0
Query: 55 LRMSTGGSFCYRYPRPSVTVDTLIFCAENNDV--KLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLD--NISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSK-GTKAGDDASAAAFFPFGQLP-PLAFDHRTIIQEAWPRLI-----VCESGGKTVVKERGSAKV 221
L +S S YRYPRPS+TVDT+I + +LLLIKR NDPFK WALPGGFVD++EGLD AAAREL+EET +D + QVGSFGDPGRDPRG TVTVAYAA + + G KA DDA+ A ++ LP PLAFDH+ I+ EA+ + + GG ++ + SAK+
Sbjct: 24 LHISRAMSHTYRYPRPSITVDTIIISEPQPSIPPQLLLIKRKNDPFKDCWALPGGFVDENEGLDAAAARELQEETSVDPSTVDLIQVGSFGDPGRDPRGWTVTVAYAAIVPDTNLGVKAADDAADAQWYDLKNLPLPLAFDHQMILCEAFKTMAQRFKEAEDKGGLKLMLKDASAKL 200
BLAST of NO13G02300 vs. NCBI_GenBank
Match: PNH10108.1 (ADP-ribose pyrophosphatase [Tetrabaena socialis]) HSP 1 Score: 163.7 bits (413), Expect = 7.100e-37 Identity = 83/139 (59.71%), Postives = 102/139 (73.38%), Query Frame = 0
Query: 65 YRYPRPSVTVDTLIFCAENNDV---KLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLD--NISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSK-GTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEA 198
Y+YPRP+VTVDT+I A +V ++LLIKR N PFK WALPGGFVD+ EGLD AA RELKEET +D +++ QVG+FGDPGRDPRG TVTVAYAA + S+ G KA DDA A +F LP LAFDH+ +++ A
Sbjct: 34 YKYPRPAVTVDTVIVAARPGNVAPAQMLLIKRKNPPFKDCWALPGGFVDEGEGLDAAAGRELKEETSVDPSSVALTQVGAFGDPGRDPRGWTVTVAYAALVPSTNMGVKAADDAKEARWFDVANLPQLAFDHKLVVRSA 172
BLAST of NO13G02300 vs. NCBI_GenBank
Match: XP_002950432.1 (hypothetical protein VOLCADRAFT_74606 [Volvox carteri f. nagariensis] >EFJ48633.1 hypothetical protein VOLCADRAFT_74606 [Volvox carteri f. nagariensis]) HSP 1 Score: 162.2 bits (409), Expect = 2.100e-36 Identity = 82/142 (57.75%), Postives = 104/142 (73.24%), Query Frame = 0
Query: 61 GSFCYRYPRPSVTVDTLIFCAENNDV--KLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLD--NISFAQVGSFGDPGRDPRGHTVTVAYAAFL-LSSKGTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEA 198
GSF Y+YPRP+VTVDT+I + + +LLLIKR N P+K +WALPGGFVD+ EGLD AA REL+EET +D ++ QVG+FGDPGRDPRG TVTVAYAA + ++ G KA DDA A +F LP LAFDH+ +++ A
Sbjct: 28 GSFTYQYPRPAVTVDTIIVSRPRDGIPPQLLLIKRKNPPYKDSWALPGGFVDEGEGLDAAAGRELQEETSVDPATVTLTQVGAFGDPGRDPRGWTVTVAYAALVPTTNLGVKAADDAKDARWFDVTMLPLLAFDHKLVVRTA 169
BLAST of NO13G02300 vs. NCBI_GenBank
Match: WP_088655053.1 (NUDIX hydrolase [Geofilum rhodophaeum]) HSP 1 Score: 162.2 bits (409), Expect = 2.100e-36 Identity = 81/139 (58.27%), Postives = 93/139 (66.91%), Query Frame = 0
Query: 63 FCYRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLDNISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSKGTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEAWPRL 202
+ Y YPRPSVT D ++ D +LLI+R DP+KG WALPGGFVD+DE L+ AA REL EETGL+ S QVG+FG PGRDPRGHTVTVAYA S +AGDDA A +F LP LAFDH II A RL
Sbjct: 2 YSYAYPRPSVTADVVLLAGSGEDFFILLIQRAADPYKGCWALPGGFVDQDEDLEAAARRELLEETGLEVDSLVQVGAFGKPGRDPRGHTVTVAYATVWPSVVEARAGDDAREAQWFSLRALPELAFDHDAIIAAALERL 140
BLAST of NO13G02300 vs. NCBI_GenBank
Match: WP_079557272.1 (NUDIX hydrolase [Alkalitalea saponilacus] >SKB92021.1 8-oxo-dGTP diphosphatase [Alkalitalea saponilacus] >ASB50152.1 NUDIX hydrolase [Alkalitalea saponilacus]) HSP 1 Score: 160.2 bits (404), Expect = 7.900e-36 Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 0
Query: 65 YRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLDNISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSKGTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEA 198
Y YPRPSVT D ++F + KLLLIKR +PFKG WALPGGFVD++E L D A REL+EETGL + Q+G++G P RDPRGHT+TVAY A AGDDA AA+F +LP LAFDH IIQ+A
Sbjct: 4 YNYPRPSVTCDIVVFSVGIDQSKLLLIKRKFEPFKGLWALPGGFVDENEDLTDTALRELEEETGLSGVKVKQIGAYGKPNRDPRGHTITVAYLALTDVELELNAGDDAHDAAWFKIDELPELAFDHADIIQDA 136
BLAST of NO13G02300 vs. NCBI_GenBank
Match: PSC69087.1 (nudix hydrolase [Micractinium conductrix]) HSP 1 Score: 159.8 bits (403), Expect = 1.000e-35 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 0
Query: 59 TGGSFCYRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLD--NISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSK-GTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEA 198
+G CY YPRP++TVD +I A+ +LLLI+R ++PF G+WALPGGFVD EGL+ AAAREL+EET +D + QVG+FG+PGRDPRG T+TVA+AA + S++ G KA DDA AA +FP +LP LAFDH+ +++ A
Sbjct: 2 SGQQHCYPYPRPALTVDAII-VAQTAPPQLLLIQRKHNPFAGSWALPGGFVDSGEGLEAAAARELQEETSVDPSTVLLTQVGAFGEPGRDPRGWTITVAFAALVPSTQLGVKAADDAQAAEWFPADRLPALAFDHKLVVRTA 142
BLAST of NO13G02300 vs. NCBI_GenBank
Match: PRW32938.1 (NUDIX hydrolase [Chlorella sorokiniana]) HSP 1 Score: 157.9 bits (398), Expect = 3.900e-35 Identity = 83/164 (50.61%), Postives = 113/164 (68.90%), Query Frame = 0
Query: 61 GSFCYRYPRPSVTVDTLIFCA--ENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLD--NISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSK-GTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEAWPRLIVCESGGKTVVKERGSAK 220
G Y++PRPS+TVD +I A + KLLLI+R +DPF G WALPGGFVD++E LD AAAREL+EETG++ ++ QVG+FGDPGRDPRG V+VAYAA + +++ G +A DDA AA ++ QLP LAFDH+ I++ A L G+ V++R +
Sbjct: 4 GGHTYKWPRPSLTVDAVIVAAPESGSSAKLLLIQRKHDPFAGAWALPGGFVDENEPLDQAAARELQEETGVNPVDVLLTQVGAFGDPGRDPRGWCVSVAYAALVPTTELGVQAADDAEAAHWYDMQQLPKLAFDHKLIVRTALRHL-----AGQEAVQQRAGLR 162
BLAST of NO13G02300 vs. NCBI_GenBank
Match: WP_044118012.1 (NUDIX hydrolase [Alkaliflexus imshenetskii]) HSP 1 Score: 155.6 bits (392), Expect = 1.900e-34 Identity = 69/133 (51.88%), Postives = 89/133 (66.92%), Query Frame = 0
Query: 65 YRYPRPSVTVDTLIFCAENNDVKLLLIKRGNDPFKGTWALPGGFVDKDEGLDDAAARELKEETGLDNISFAQVGSFGDPGRDPRGHTVTVAYAAFLLSSKGTKAGDDASAAAFFPFGQLPPLAFDHRTIIQEA 198
Y YPRPSVT D ++ +LLI+R ++P K WALPGGFVD++E L D A REL EETG++ + Q+G+FG PGRDPRGHT+T+A+ + AGDDA A +FP +LPPLAFDH II+ A
Sbjct: 5 YEYPRPSVTADVVLLAGSEGSQSILLIQRAHEPHKDMWALPGGFVDENEDLPDTAVRELFEETGIERVGLKQIGAFGKPGRDPRGHTITIAFLGIIPDRVLAVAGDDAKHAEWFPINELPPLAFDHHEIIEVA 137 The following BLAST results are available for this feature:
BLAST of NO13G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02300 ID=NO13G02300|Name=NO13G02300|organism=Nannochloropsis oceanica|type=gene|length=795bpback to top protein sequence of NO13G02300.1 >NO13G02300.1-protein ID=NO13G02300.1-protein|Name=NO13G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top Synonyms
Publications
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