NO13G02150, NO13G02150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02150 vs. NCBI_GenBank
Match: EWM21878.1 (40s ribosomal protein s6 [Nannochloropsis gaditana]) HSP 1 Score: 355.1 bits (910), Expect = 2.100e-94 Identity = 180/214 (84.11%), Postives = 189/214 (88.32%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIFQ 269 MKLNIANP TGQQHVVEIDDEKRLRAFYDRRISQEVDG HIGDEFKGY+F+ISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLV+VKRGEE V GLTDS VPRRLGPKRAN IRKLFNLSK+ DVT + + R FENKKGKTV K+P IQRL+TPL LQ KR+RL AKKA AEYHRIFQ Sbjct: 1 MKLNIANPQTGQQHVVEIDDEKRLRAFYDRRISQEVDGEHIGDEFKGYVFKISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVLVKRGEEDVVGLTDSAVPRRLGPKRANNIRKLFNLSKDADVTTYPVERKFENKKGKTVVKKPKIQRLITPLRLQHKRRRLEAKKAATTKAKAEAAEYHRIFQ 214
BLAST of NO13G02150 vs. NCBI_GenBank
Match: GAX95349.1 (40S ribosomal protein S6 [Pythium insidiosum]) HSP 1 Score: 293.9 bits (751), Expect = 5.600e-76 Identity = 152/212 (71.70%), Postives = 170/212 (80.19%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRI 267 MKLNIANP TG Q V+++DDE +LRAFYD+R+SQEV+G +GDEFKG++FRISGGNDKQGFPMKQGVLT+ RVRLLL KG SCYR RRKGERKRKSVRG IVGPDLSVLNLVVVK+GE V GLTD QVPRRLGPKRA+ IRKLFNLSKEDDV K+ I R FE+K GK K P IQRLVTP TL KR+ AK+A AEY R+ Sbjct: 1 MKLNIANPHTGAQKVLDVDDEHKLRAFYDKRMSQEVEGDVLGDEFKGFVFRISGGNDKQGFPMKQGVLTNGRVRLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKQGEGEVPGLTDVQVPRRLGPKRASNIRKLFNLSKEDDVRKYVIRRKFESKTGKKNDKAPKIQRLVTPRTLHHKREIATAKQAQREKVKREAAEYSRL 212
BLAST of NO13G02150 vs. NCBI_GenBank
Match: OQR81510.1 (40S ribosomal protein S6 [Thraustotheca clavata]) HSP 1 Score: 292.7 bits (748), Expect = 1.300e-75 Identity = 149/213 (69.95%), Postives = 168/213 (78.87%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIF 268 MKLNIANP TG Q V+E DDE +LRAFY++R+SQEV+G H+GDEFKG++FRISGGNDKQGFPMKQGVLT+ R RLLL KG SCYR RRKGERKRKSVRG IVGPDLSVLNLVVVK G+ V GLTD +PRRLGPKRA+ IRKLFNLSKEDDVTK+ I R F++K GK K P IQRLVTP TL KRQ + K A AEY R++ Sbjct: 1 MKLNIANPHTGMQKVIECDDELKLRAFYEKRMSQEVEGDHLGDEFKGFVFRISGGNDKQGFPMKQGVLTNGRARLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGDNDVPGLTDGHIPRRLGPKRASNIRKLFNLSKEDDVTKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKRQIASRKLAQREKVKRDAAEYSRLY 213
BLAST of NO13G02150 vs. NCBI_GenBank
Match: OQR85174.1 (40S ribosomal protein S6 [Achlya hypogyna]) HSP 1 Score: 288.9 bits (738), Expect = 1.800e-74 Identity = 146/213 (68.54%), Postives = 167/213 (78.40%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIF 268 MKLNIANP TG Q V+E DDE +LRAFY++R++QEVDG H+G+EFKG++FRISGGNDKQGFPMKQGVLT+ R RLLL KG SCYR RRKGERKRKSVRG IVGPDLSVLNLVV+K G+ V GLTD +PRRLGPKRA+ IRKLFNL+KEDDV K+ I R F++K GK K P IQRLVTP TL KRQ A K A AEY R++ Sbjct: 1 MKLNIANPHTGMQKVIECDDELKLRAFYEKRMAQEVDGEHLGEEFKGFVFRISGGNDKQGFPMKQGVLTNGRARLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVLKAGDNEVPGLTDGHIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKRQIAARKLAQREKVKSDAAEYSRLY 213
BLAST of NO13G02150 vs. NCBI_GenBank
Match: XP_012199259.1 (40S ribosomal protein S6 [Saprolegnia parasitica CBS 223.65] >KDO30078.1 40S ribosomal protein S6 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 288.5 bits (737), Expect = 2.400e-74 Identity = 146/213 (68.54%), Postives = 167/213 (78.40%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIF 268 MKLNIANP TG Q V+E DDE +LRAFY++R++QEVDG H+G+EFKG++FRISGGNDKQGFPMKQGVLT+ R RLLL KG +CYR RRKGERKRKSVRG IVGPDLSVLNLVVVK G+ V GLTD +PRRLGPKRA+ IRKLFNLSKEDDV K+ I R F++K GK K P IQRLVTP TL KRQ A K + AEY R++ Sbjct: 1 MKLNIANPHTGMQKVIECDDELKLRAFYEKRMAQEVDGEHLGEEFKGFVFRISGGNDKQGFPMKQGVLTNGRARLLLSKGKTCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGDNDVPGLTDGHIPRRLGPKRASNIRKLFNLSKEDDVRKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKRQIAARKLSQREKVKSDAAEYSRLY 213
BLAST of NO13G02150 vs. NCBI_GenBank
Match: XP_009041386.1 (hypothetical protein AURANDRAFT_55398 [Aureococcus anophagefferens] >EGB03964.1 hypothetical protein AURANDRAFT_55398 [Aureococcus anophagefferens]) HSP 1 Score: 288.1 bits (736), Expect = 3.100e-74 Identity = 148/212 (69.81%), Postives = 168/212 (79.25%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRI 267 MKLNIA PSTG Q +EIDDEK+LRA YDRRISQEVDG +G+EF GY+FRI+GGNDKQGFPMKQGVL + RVRLLLR G SCYR RR GERKRKSVRG IVG DL+VLNLVVVK+G+ + GLTD+ V RLGPKRANKIRKLF L+K+DDV K+ I+R FENKKGK+VTK P IQRL+TPL LQRKR R K A EY+R+ Sbjct: 1 MKLNIACPSTGAQKFLEIDDEKKLRALYDRRISQEVDGEALGEEFAGYVFRITGGNDKQGFPMKQGVLCNHRVRLLLRAGASCYRQRRAGERKRKSVRGCIVGADLAVLNLVVVKQGDADIEGLTDTPVAVRLGPKRANKIRKLFALTKDDDVRKYVIARKFENKKGKSVTKAPKIQRLITPLCLQRKRDRKRVKMAAITKAKAEAVEYNRV 212
BLAST of NO13G02150 vs. NCBI_GenBank
Match: XP_008873377.1 (hypothetical protein H310_09164 [Aphanomyces invadans] >ETV97816.1 hypothetical protein H310_09164 [Aphanomyces invadans]) HSP 1 Score: 287.3 bits (734), Expect = 5.300e-74 Identity = 147/213 (69.01%), Postives = 167/213 (78.40%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIF 268 MKLNIANP TG Q V+EIDDE +LRAFY++R++QEVDG H+G+EFKG++F+ISGGNDKQGFPMKQGVLT+ R RLLL KG SCYR RRKGERKRKSVRG IVGPDLSVLNLVVVK G+ VAGLTD +PRRLGPKRA+ IRKLFNL+KEDDV K+ I R F++K GK K P IQRLVTP TL K Q A A AEY RI+ Sbjct: 1 MKLNIANPHTGTQKVLEIDDEHKLRAFYEKRMTQEVDGEHLGEEFKGFVFKISGGNDKQGFPMKQGVLTNGRARLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKTGDNEVAGLTDGHIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKAQIAAKIVAQREKVKRDAAEYSRIY 213
BLAST of NO13G02150 vs. NCBI_GenBank
Match: ETI52627.1 (hypothetical protein F443_04343 [Phytophthora parasitica P1569] >ETI52628.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK92507.1 hypothetical protein L915_04197 [Phytophthora parasitica] >ETK92508.1 hypothetical protein, variant [Phytophthora parasitica] >ETL45916.1 hypothetical protein L916_04151 [Phytophthora parasitica] >ETL45917.1 hypothetical protein, variant [Phytophthora parasitica] >ETL99077.1 hypothetical protein L917_04051 [Phytophthora parasitica] >ETL99078.1 hypothetical protein, variant [Phytophthora parasitica] >ETM52231.1 hypothetical protein L914_04163 [Phytophthora parasitica] >ETM52232.1 hypothetical protein, variant [Phytophthora parasitica] >ETO76893.1 hypothetical protein F444_07782 [Phytophthora parasitica P1976] >ETO76894.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP22489.1 hypothetical protein F441_04288 [Phytophthora parasitica CJ01A1] >ETP22490.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP50371.1 hypothetical protein F442_04309 [Phytophthora parasitica P10297] >ETP50372.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF80409.1 40S ribosomal protein S6 [Phytophthora nicotianae] >KUF97378.1 hypothetical protein AM588_10011696 [Phytophthora nicotianae] >KUG00444.1 40S ribosomal protein S6 [Phytophthora nicotianae]) HSP 1 Score: 287.0 bits (733), Expect = 6.900e-74 Identity = 149/212 (70.28%), Postives = 166/212 (78.30%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRI 267 MKLNIANP TG Q V+E+DDE +LRAFYD+RISQEV+G +GDEFKG+IFR+SGGNDKQGFPMKQGVL++ R RLLL KG SCYR RRKGERKRKSVRG IVGPDLSVLNLVVVK GE V GLTD Q+PRRLGPKRA+ IRKLFNL+KEDDV K+ I R FE+K GK K P IQRLVTP TL KRQ K AEY+R+ Sbjct: 1 MKLNIANPLTGAQKVLEVDDEHKLRAFYDKRISQEVEGDVLGDEFKGFIFRVSGGNDKQGFPMKQGVLSNGRARLLLSKGKSCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGEADVPGLTDVQIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFESKTGKKNDKAPKIQRLVTPRTLHHKRQIALKKVQQREKVQREAAEYNRL 212
BLAST of NO13G02150 vs. NCBI_GenBank
Match: CBJ34010.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 285.8 bits (730), Expect = 1.500e-73 Identity = 144/193 (74.61%), Postives = 164/193 (84.97%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLA 248 MKLNIA+P TG Q +EIDDEK+LRA YD+RISQEV+G +GDEF GY+FRISGGNDKQGFPMKQGVL+ RVRLLL KG+SCYR RR+GERKRKSVRG IV DL+VLNLVV K+GE+ + GLTD+ VPRRLGPKRAN IRKLFNL K+DDV K+ I+R FE KKGKTVTKRP IQRL+TP+ LQRKR R A Sbjct: 1 MKLNIASPGTGSQMFIEIDDEKKLRALYDKRISQEVEGEALGDEFAGYMFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGEQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKDDDVRKYVIARKFE-KKGKTVTKRPHIQRLITPIRLQRKRARAA 192
BLAST of NO13G02150 vs. NCBI_GenBank
Match: XP_008610660.1 (40S ribosomal protein S6 [Saprolegnia diclina VS20] >EQC35898.1 40S ribosomal protein S6 [Saprolegnia diclina VS20]) HSP 1 Score: 285.8 bits (730), Expect = 1.500e-73 Identity = 144/213 (67.61%), Postives = 167/213 (78.40%), Query Frame = 0 Query: 55 MKLNIANPSTGQQHVVEIDDEKRLRAFYDRRISQEVDGVHIGDEFKGYIFRISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVVVKRGEEHVAGLTDSQVPRRLGPKRANKIRKLFNLSKEDDVTKFAISRTFENKKGKTVTKRPSIQRLVTPLTLQRKRQRLAAKKAXXXXXXXXXAEYHRIF 268 MKLNIANP TG Q V+E DDE +LRAFY++R++QEV+G H+G+EFKG++FRISGGNDKQGFPMKQGVLT+ R RLLL KG +CYR RRKGERKRKSVRG IVGPDLSVLNLVVVK G+ V GLTD +PRRLGPKRA+ IRKLFNL+KEDDV K+ I R F++K GK K P IQRLVTP TL KRQ A K + AEY R++ Sbjct: 1 MKLNIANPHTGMQKVIECDDELKLRAFYEKRMAQEVEGEHLGEEFKGFVFRISGGNDKQGFPMKQGVLTNGRARLLLSKGKTCYRPRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGDNDVPGLTDGHIPRRLGPKRASNIRKLFNLTKEDDVRKYVIRRKFDSKTGKKNDKAPKIQRLVTPRTLHHKRQIAARKLSQREKVKSDAAEYSRLY 213 The following BLAST results are available for this feature:
BLAST of NO13G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02150 ID=NO13G02150|Name=NO13G02150|organism=Nannochloropsis oceanica|type=gene|length=2939bpback to top protein sequence of NO13G02150.1 >NO13G02150.1-protein ID=NO13G02150.1-protein|Name=NO13G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=297bpback to top Synonyms
Publications
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