NO13G02090, NO13G02090 (gene) Nannochloropsis oceanica

Overview
NameNO13G02090
Unique NameNO13G02090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2986
Alignment locationchr13:592118..595103 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:592118..595103 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02090.1NO13G02090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02090.1NO13G02090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02090 ID=NO13G02090|Name=NO13G02090|organism=Nannochloropsis oceanica|type=gene|length=2986bp
CGCGTTTTCCCGGCCCACGTAGCATTTCTTTCTTTCATCTGGAGAACAAA
TTGTGGAAGAAGACCGGTTCTACAAATTTGCTAGGATGACTTGGTGGCGT
CAGTCCATAGGCGTTGTGCATCTGACCCTGGAGTGCTGGAGCAGGGGAAC
CAGGGGAATGGTAATAGTAGAGGGTTGATAACACGACGACGATGAAGGGG
AGTAAGAGGAGCAGCCAACCAGGACAACCAAGGGTACGGTCGAGAGCACC
TGACTCAGCAAGTCTTACCCATTTGACAGTCAAATTACCACATGGGTGCG
CAAGACTGTCACGAAATGCAACTTGGCCAGGGACATGGTAGTGGTCAATG
ACGGGGCCGAGGCTGGGGGCGTGGGATCCACCGGCGTGGTACGCCCGTTA
TCGGGCTGCTTGGACTTTGGGGCCGTTCCCCATGATGAAAGACTGTCGGC
GTGTAAGATATGGACGTGGCTGAGGGCAGGGCCTAAGACGGCTTGACCAT
CAAGGGGAGGTCAACTTCGAGGCAGAGCGAGCGCGTATTGGACATTGTCC
TGGCTACATATTGAAACTCAATAACAACAACGCGGGGCCCACCTCTACGC
AGAAAAGCGCGTTGCAGTCACAGGGAGCAAGATGCTCAGCCAGATCCACC
CGCAGGAACCCATCGAATCTATGGCGGAGCTCATCGCATGTCTCGAAAGC
AATTGAAGACCGTCTATCCCATCGTCTTGCACGCAGTTAACCGGAAATAT
GTGATCATCAGCGTGCAGCTCTAAAGGCGAAGTATTTCTTCTCAAGCTTC
CGCATCTCTACAAATTGAATAGGAGGTTTATCGGCTCAGCCAAGCAGCTG
CAGACAAGGATTGAATGCTCGAGGCTGAGACTCGAACCTCCTCAGGGCCC
GAAGTCGACTTCTCCCGTATGGGTGGCGTCCAGGTCCTCCTCATCAATTG
TGCCGTCGCCCATAAATCAGGCCACCTTGTCCCCATAGAAATAAAAATCC
TACCTTAAATTGTCCACCCTCACATCCTTGACAGCAAATGTGCGCAACAA
CAACGCGTCGACGCATGGCGATGGCAACCTCCTCCTCTGGAGGGATGTTT
AACGTGCCATGGCGTCGCTGTTCTGTTATCGCTTGTGAGAGGATGCCGCG
AAGGACCAGTGTCCCAATTCCTTTAAGGGCTTTTCATCATCCGCCGGCCC
TGGGAGACAGGACAAGCGTGTACCAAGTCCCCGTGGAGATCCAGCAATTA
TAACGCAGTTTTTATGCAATTCTCTAGTACAAATAATCAATAATTGCTCC
CCCTTCCTCCGTGAGCACAGCACCCACCTAGAACAGTCTGATCTCTTCCC
AACACCAGCACGAATATCCTCCTCATCCCACGCAAGCAAAATGGCACGAA
TAATCTATGCGGCATCGAGTAGTGCAGCCTGCTGCTGACCGCTTAGCGCA
AAGCTCTGGCCCCCATGTTTGGCTCACCTCCTCCCCGCTCCCCATCGTAC
ACGATACAGCTTCTTCGCTCTTCCAAGCCTCCCGGTACCGAACGCCATGC
GTGTTTTCAGTCGTCGCATACTTCTATCGGCCACGGTGGCCATGGTTGCT
GCTTCGAGTGCCAATGCCCAAGGCCCTTTCCTTCGGTCCATTTTTGGGAA
TAATAAAGAACCCATCAAACAAGAGCCTGCTTCACCAGCCGAGGCCAATG
CCCCTGCCCAGCCGGAAGCGGTGCCCATGGATCCGACAGGTGTCGTGATA
TTTGCTGCTACTGTCGTTGATCCCCTAGCTCTCCCGGAGGCGCCGATCGC
CCCTTTGGCCAAGGCGCCAGTTGAGCCCATCGCCCCCGAAGTCCTTGCAC
CTGCCGCGCTCAAAGCACCCAGGGTTGAGACTCCGACCGCTGCTGTTGAC
TCTGTTGCTCCCGTGACGCCTGTGGTTGATCCTGTCGCTCCCGTGACACC
TGTGGTTGATCCTGTCGCTCCCGTGACACCTGTGGTTGATCCTGTCGCTC
CCGTGACGCCTGTGGTTGATCCTGTCGCTCCCGTAACGCCTGTGGTTGAT
CCTGTCGCTCCCGTGACACCTGTGGTTGATCCTGTCGCTCCCGTGACACC
TGTGGTTGATCCTGTCGCTCCCGTGACACCTGTGGTTGATCCTGTCGCTC
CCGTGACACCTGTGGTTGATCCTGTCGCTCCCGTAACGCCTGTGGTTGAT
CCTGTCGCTCCGGTGACGCCTGTGGTTGATCCTGTCGCTCCGGTGACGCC
TGTGGTTGATCCTGTCGCTCCCGTGACACCTGTGGTTGATCCTGTCGCTC
CCGTGACGCCTGTGGTTGATCCTGTCGCTCCCGTGACACCTGTGGTTGAT
CCTGTCGCTCCCGTGACACCTGTGGTTGATCCTGTCGCTCCCGTGACACC
TGTGGTTGATCCTGTCGCTCCGGTGACGCCTGTGGTTGATCCTGTCGCTC
CCGTGACACCTGTGGTTGACCCAGGGCAGCCGGCCGTGCAACGCAAGAAG
AAGACCCTCAAGGAGATTTTTGGGTTTTAGTGCGAGCATTAGGAGGCGGA
GTCGGGGGGGGAAAATTGGGGAGGGAGAAAGCTCGAATGTCGTGTGGCAA
AAAAGTACAATAGGGAAAGGAGCTTGATGTGACCCTGGGGCATGACAGCA
AACAACATGGAATATATTGAAAGGAACGAGAGAAGCAATAGTTCAACAGT
AAGTATAAGAATGCACATACATACGACCCGCTAGAAACACTTGATTATCG
AAACGCACACACAGAGGATGTGAAAATAGCATTGGAGTGCAAGAAAAAGG
AGAGGATCTCTGGAGATTGTATGTGCGTGGGTGTATCGATGTGCTATGGG
ATGGACGGCGTATTGAAGGACAGTTAGGGGACGGCTTCACCTCAACCACA
GTTGATTCGTGCAAGCTTATAGAGAGCGAATTTAATATGCACGAACACAC
ATAGCATGAGCCTAAGTCAACACTACACTGTCTGGT
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protein sequence of NO13G02090.1

>NO13G02090.1-protein ID=NO13G02090.1-protein|Name=NO13G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MRVFSRRILLSATVAMVAASSANAQGPFLRSIFGNNKEPIKQEPASPAEA
NAPAQPEAVPMDPTGVVIFAATVVDPLALPEAPIAPLAKAPVEPIAPEVL
APAALKAPRVETPTAAVDSVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPV
APVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPV
APVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPV
APVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPVAPVTPVVDPV
APVTPVVDPGQPAVQRKKKTLKEIFGF*
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Synonyms
Publications