NO13G01820, NO13G01820 (gene) Nannochloropsis oceanica

Overview
NameNO13G01820
Unique NameNO13G01820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1909
Alignment locationchr13:533709..535617 -

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Properties
Property NameValue
DescriptionCytochrome c1 heme protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:533709..535617 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0020037heme binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036909Cyt_c-like_dom_sf
IPR021157Cyt_c1_TM_anchor_C
IPR009056Cyt_c-like_dom
IPR002326Cyt_c1
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Homology
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_008873913.1 (hypothetical protein H310_09589 [Aphanomyces invadans] >ETV97704.1 hypothetical protein H310_09589 [Aphanomyces invadans])

HSP 1 Score: 354.8 bits (909), Expect = 2.600e-94
Identity = 170/267 (63.67%), Postives = 206/267 (77.15%), Query Frame = 0 
Query:   14 VVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            V  PA+K+      G    G +V  GVA CS D +P++ YG+ H+G L S+DY AVRRG+QVY+EVCA+CH+++  +FR+LVGVTH+E+E K +A   DV+DGPN EGEMFERPGKLSD +P PYAN EAA AANNGA PPDLSLI KAR  G DY+FALLTGY+D PEGK + +GL YNPYF GGAIAM +QL+DG++ YEDGTPAT SQM+KDV++FLAWAAEPEHD RKK G+QW   L AA  LTG+YKR RW+ LKT K  Y
Sbjct:    6 VQSPALKKA-AAAAGTAAIGGSVFTGVAACSDDSIPALHYGFEHNGPLTSFDYAAVRRGYQVYKEVCATCHSIDKIHFRHLVGVTHTEDEAKALAADVDVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYVDAPEGKELGNGLYYNPYFGGGAIAMEKQLEDGKVTYEDGTPATASQMAKDVSIFLAWAAEPEHDERKKMGMQWCLGLFAAALLTGYYKRLRWAPLKTRKISY 271
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: CCA21671.1 (cytochrome c1 putative [Albugo laibachii Nc14])

HSP 1 Score: 353.2 bits (905), Expect = 7.400e-94
Identity = 173/266 (65.04%), Postives = 212/266 (79.70%), Query Frame = 0 
Query:   15 VPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            +P A++ G     GALV+G +V  GV  C+ D +   DYG++H G L+S+DY +VRRG+QVYREVCASCH+LE   FRNL+GVTH+EE++K IA   DV DGPN +GEMF+RPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR GGVDY+FALLTGY++PP+GK +LSGL YNPYF GGAIAM RQLQDGQ++Y+DGTPATTSQM+KDVAVFLAWAAEPEHD RKK G++ + A+ A   LTG+YKR +W+ LK+ K  Y
Sbjct:    4 IPHALRRGVQIGAGALVSG-SVLTGVTECNDDALSVPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLIGVTHTEEQLKAIAADIDVRDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVEPPKGKELLSGLYYNPYFSGGAIAMERQLQDGQIDYDDGTPATTSQMAKDVAVFLAWAAEPEHDERKKQGMKVLLAMGALALLTGYYKRLKWAPLKSRKISY 268
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_024581378.1 (ubiquinol-cytochrome c reductase cytochrome c1 subunit [Plasmopara halstedii] >CEG45009.1 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Plasmopara halstedii])

HSP 1 Score: 350.9 bits (899), Expect = 3.700e-93
Identity = 174/270 (64.44%), Postives = 206/270 (76.30%), Query Frame = 0 
Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H   L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEEVK IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSLI K+R  GVDY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYED T  TTSQM+KDV+VFLAWA+EPEHD RKK G+Q   ALL   ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKMGAGALLGG-----SVVTGVTALSSDQIEALHYGFDHQSPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEEVKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLIVKSRHAGVDYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDKTLCTTSQMAKDVSVFLAWASEPEHDVRKKQGMQTTIALLTLCALTGYYKRLKWAPLKTRKITY 268
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: KUF96642.1 (hypothetical protein AM588_10006310 [Phytophthora nicotianae])

HSP 1 Score: 348.6 bits (893), Expect = 1.800e-92
Identity = 166/236 (70.34%), Postives = 192/236 (81.36%), Query Frame = 0 
Query:   45 ADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            A  + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:   11 AAKIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 246
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_009836561.1 (hypothetical protein H257_11360 [Aphanomyces astaci] >ETV74048.1 hypothetical protein H257_11360 [Aphanomyces astaci])

HSP 1 Score: 340.1 bits (871), Expect = 6.500e-90
Identity = 166/267 (62.17%), Postives = 200/267 (74.91%), Query Frame = 0 
Query:   14 VVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            V  PA+K+      G    G +V  GV   S D +P++ YG+ H G L S+DY AVRRG+QVY+EVCA+CH+++  +FR+LVGVTH+E E K +A   DV DGPN +GE FERPGKLSD +P PYAN EAA AANNGA PPDLSLI KAR  G DY+FALLTGY++ PEGK + +GL YNPYF GGAIAM +QL+DG++ YEDGTPAT SQM+KDV+VFLAWAAEPEHD RKK G+QW   L AA  LTG+YKR RW+ LKT K  Y
Sbjct:    6 VQSPALKKA-AAAAGTAAIGGSVFTGVTAFSDDSIPALHYGFEHDGPLTSFDYAAVRRGYQVYKEVCATCHSVDKIHFRHLVGVTHTEAEAKALAADIDVEDGPNDQGESFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYVEAPEGKELGNGLYYNPYFGGGAIAMEKQLEDGKVTYEDGTPATASQMAKDVSVFLAWAAEPEHDERKKMGLQWCLGLFAAAVLTGYYKRLRWAPLKTRKISY 271
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: OQR86900.1 (cytochrome c1, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 335.1 bits (858), Expect = 2.100e-88
Identity = 157/248 (63.31%), Postives = 189/248 (76.21%), Query Frame = 0 
Query:   33 GTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            G +V  GV   S D +PS  YG+ H G L S+DY +VRRG+QVY+EVC++CH+L+  +FR+LVGVTH+EE+ KKIA   +V+DGPN EGEMF+RPGKLSD  P PYAN EAA AANNGA PPDLSL+ KAR  G DYIF+L+TGY+  PEG  + +GL+YNPYF GG IAMA+ L DGQ+EYEDGTPAT SQM+KDVA FL+WAAEPEHD RKK G+QW   L      TG+YKR RW+ LKT K  Y
Sbjct:   19 GASVMTGVTAMSDDCIPSPHYGFEHQGPLTSFDYASVRRGYQVYKEVCSTCHSLDKIHFRHLVGVTHTEEQAKKIAADIEVVDGPNDEGEMFDRPGKLSDPFPKPYANDEAAAAANNGAVPPDLSLMAKARHAGADYIFSLMTGYVPAPEGNEVGAGLHYNPYFSGGMIAMAQPLNDGQVEYEDGTPATVSQMAKDVACFLSWAAEPEHDERKKMGMQWCFGLFVTALFTGYYKRMRWAPLKTRKITY 266
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_009035606.1 (hypothetical protein AURANDRAFT_23904 [Aureococcus anophagefferens] >EGB09546.1 hypothetical protein AURANDRAFT_23904 [Aureococcus anophagefferens])

HSP 1 Score: 332.8 bits (852), Expect = 1.000e-87
Identity = 164/251 (65.34%), Postives = 194/251 (77.29%), Query Frame = 0 
Query:   32 AGTAV-AGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGV-THSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            A TAV AG V++C+ DH+ S +  W+HHG LA++D  +VRRGFQVY+EVCA+CH++E   FRNLV     SE EVK +AE  +++DGPN EGEMFERPGKLSD +PGPYAN+EAARAANNGA PPDLSLI KAR GG DYIF+LL+GY D PEGK +L GL YNPYF GGAI M   L D Q+E+ DGTPAT SQM+KDVAVFL+WAAEPEHD RKKAG +W+ AL  A  + G+ KRFRWS LK  K  Y
Sbjct:   14 AATAVFAGSVSLCNEDHIGSQELHWSHHGALAAFDACSVRRGFQVYKEVCATCHSVERLAFRNLVEYGAWSEAEVKAMAEEIEIVDGPNDEGEMFERPGKLSDPMPGPYANEEAARAANNGALPPDLSLIVKARHGGADYIFSLLSGYCDAPEGKVMLPGLYYNPYFAGGAIGMPAPLMDEQVEFPDGTPATVSQMAKDVAVFLSWAAEPEHDDRKKAGFRWLVALSLAAVVAGWTKRFRWSILKARKISY 264
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_012205190.1 (hypothetical protein SPRG_10841 [Saprolegnia parasitica CBS 223.65] >KDO24053.1 hypothetical protein SPRG_10841 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 332.4 bits (851), Expect = 1.400e-87
Identity = 157/256 (61.33%), Postives = 191/256 (74.61%), Query Frame = 0 
Query:   25 KVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            K  GA +   +V  GV   S D +PS  YG+ H G L S+DY +VRRG+QVY+EVC++CH+L+  +FR+LVGVTH+E+  KK+A   +V+DGPN EGEMF+RPGKLSD  P PYAN EAA AANNGA PPDLSL+ KAR  G DYIF+L+TGY+  PEG  + +GL+YNPYF GG IAMA+ L DGQ+EYEDGTPAT SQM+KDVA FL+WAAEPEHD RKK G+QW   L      TG+YKR RW+ LKT K  Y
Sbjct:   15 KAAGASLVAASVMTGVTSFSDDCIPSPHYGFEHQGPLTSFDYASVRRGYQVYKEVCSTCHSLDKIHFRHLVGVTHTEDHAKKLAADIEVVDGPNDEGEMFDRPGKLSDPFPKPYANDEAAAAANNGAVPPDLSLMVKARHAGADYIFSLMTGYVPAPEGNEVGAGLHYNPYFSGGMIAMAQPLNDGQVEYEDGTPATVSQMAKDVACFLSWAAEPEHDERKKMGMQWCFGLFVTALFTGYYKRMRWAPLKTRKITY 270
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_002997257.1 (cytochrome c1, mitochondrial precursor [Phytophthora infestans T30-4] >EEY69490.1 cytochrome c1, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 331.6 bits (849), Expect = 2.300e-87
Identity = 165/270 (61.11%), Postives = 201/270 (74.44%), Query Frame = 0 
Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K+IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ K+R  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIA +   +  +L    GTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKEIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKSRHAGADYLFALLTGYVDPPEGMELLPGLYYNPYFGGGAIAWSVSCRMARLSTRIGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQVTVALLALCALTGYYKRLKWAPLKTRKITY 268
[Close]
BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_008608557.1 (ubiquinol-cytochrome c reductase cytochrome c1 subunit [Saprolegnia diclina VS20] >EQC38230.1 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Saprolegnia diclina VS20])

HSP 1 Score: 330.9 bits (847), Expect = 3.900e-87
Identity = 156/253 (61.66%), Postives = 190/253 (75.10%), Query Frame = 0 
Query:   28 GALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            GA +   +V  GV   S D +PS  YG+ H G L S+DY +VRRG+QVY+EVC++CH+L+  +FR+LVGVTH+E+  KK+A   +V+DGPN EGEMF+RPGKLSD  P PYAN EAA AANNGA PPDLSL+ KAR  G DYIF+L+TGY+  PEG  + +GL+YNPYF GG IAMA+ L DGQ+EYEDGTPAT SQM+KDVA FL+WAAEPEHD RKK G+QW   L      TG+YKR RW+ LKT K  Y
Sbjct:   21 GASLVAASVMTGVTSFSDDCIPSPHYGFEHQGPLTSFDYASVRRGYQVYKEVCSTCHSLDKIHFRHLVGVTHTEDHAKKLAADIEVVDGPNDEGEMFDRPGKLSDPFPKPYANDEAAAAANNGAVPPDLSLMVKARHAGADYIFSLMTGYVPAPEGNDVGAGLHYNPYFSGGMIAMAQPLNDGQVEYEDGTPATVSQMAKDVACFLSWAAEPEHDERKKMGMQWCFGLFVTALFTGYYKRMRWAPLKTRKITY 273
The following BLAST results are available for this feature:
BLAST of NO13G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008873913.12.600e-9463.67hypothetical protein H310_09589 [Aphanomyces invad... [more]
CCA21671.17.400e-9465.04cytochrome c1 putative [Albugo laibachii Nc14][more]
XP_024581378.13.700e-9364.44ubiquinol-cytochrome c reductase cytochrome c1 sub... [more]
KUF96642.11.800e-9270.34hypothetical protein AM588_10006310 [Phytophthora ... [more]
XP_009836561.16.500e-9062.17hypothetical protein H257_11360 [Aphanomyces astac... [more]
OQR86900.12.100e-8863.31cytochrome c1, mitochondrial precursor [Achlya hyp... [more]
XP_009035606.11.000e-8765.34hypothetical protein AURANDRAFT_23904 [Aureococcus... [more]
XP_012205190.11.400e-8761.33hypothetical protein SPRG_10841 [Saprolegnia paras... [more]
XP_002997257.12.300e-8761.11cytochrome c1, mitochondrial precursor [Phytophtho... [more]
XP_008608557.13.900e-8761.66ubiquinol-cytochrome c reductase cytochrome c1 sub... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001728NSK001728Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01820.1NO13G01820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596446gene_6823Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100051g28gene8602Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01820.1NO13G01820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01820 ID=NO13G01820|Name=NO13G01820|organism=Nannochloropsis oceanica|type=gene|length=1909bp
ACTACAGCCTTTGGGTAACCCCTCCAAGAGGATGTTTTCTCGCGCGAAAG
TGGCCTTTAGGCGGGCCGCGGTCGTCCCGCCCGCCGTCAAGgtatgttgt
tgggagggaggaatcgaggcggatgactacagggttctagtatcgcaccg
cggcaaataggattgaggcttcgcattcgataccgcgtgctcatgcttga
cctcttctacacacacgcacgttacaatgcctcctaacgacccatagGAG
GGTAAGGGCAAGGTGATCGGTGCCCTGGTAGCAGGCACGGCAGTGGCAGG
CGGGGTCGCCGTGTGCAGTGCGGACCACGTCCCTTCGATTGATTACGGAT
GGAACCACCACGGTCTCCTGGCGTCGTATGACTACCCTGCgtaagttctg
cagctaagagtgtcatgcttgcccggagggtactttggggcgtcgagagt
ggcgtgacgtgcacggggttcttttctctgaggccttttttttcccgtgt
ggcaggctgcaccgcatcggaggatgtggaggaagtggagccatcggtct
tgcctcgtttgaatctttctcgagatctactgttgtgacgcacatttttt
tcgactcctactttccttttctggttcaccaaaaattcaccttttttccc
tccctcttcccctccctcccttcctcgacacctcacctgcagCGTACGCC
GCGGCTTCCAAGTCTACCGCGAAGTCTGCGCATCTTGCCACGCCCTCGAG
CACACCTACTTTCGCAATCTGGTAGGGGTGACCCATTCCGAGGAGGAGGT
GAAGAAGATTGCTGAGGCGTATGATGTCATCGATGGCCCTAACGCCGAGG
GAGAGATGTTTGAGCGCCCTGGAAAGgtacatccttccctcccttcctcc
cttcgtgttcacttggattttccttcccttttccataatatcttgagtcg
tatatctctttctaacgtgacacttgccccctcccccctcccccctccct
acctccctccctccctgcctccctgtgccttccttcagTTGTCCGACAAG
ATTCCGGGCCCCTACGCCAACAAGGAAGCTGCCCGCGCTGCGAACAATGG
AGCGTACCCTCCCGACCTCTCCCTCATCACCAAGGCGCGTGGTGGTGGGG
TTGACTACATTTTTGCGTTGCTGACTGGGTACATCGACCCCCCCGAGGGA
AAGGCGATCCTTAGCGGGCTTAACTACAACCCGTACTTCCCTGGAGGAGC
CATCGCGATGGCAAGGCAGCTTCAAGACGGGCAGTTGGAGTACGAGGACG
GGACGCCCGCCACAACCTCGCAGATGTCGAAGGACGTGGCTGTCTTCCTG
GCTTGGGCTGCAGAGCCTGAACATGACTACAGGAAGAAGGCGGGTGTGCA
GTGGATTGGGGCGTTGCTAGCTGCTTTAGCCTTGACGGGTTTCTACAAGC
GGTTCAGGTGGTCGACGCTGAAGACGGCCAAGTTCCATTATGTGGCGTAA
GGGAGGGACGTAGGGAGGAAGGGGTGTGGTGGGTGGCGCAGCATTGGTTG
GGGTCTTGATCGGGTTTATGAGGTCTCGGGGCTCGACGGTTCAGGCGGCT
AAGTTTCGTCAAGGAGGGACCTTCTACCTGTTAGCTCTGCCCGGTGGATG
CATGTATGGTTGCCGATGCCCGATGGGTCTGTGTGTGGTTCAATGAGAGA
GAGAGGCCGTATATAATAGAGGGAGAGAGAAGATGGAAACCAAGACTTAA
GGGATTGAAGGAGGGAGGGCGCCAAAGATGATAAACGAATGGGAGTAAAC
GCCCGCATTTTAATAGATACCAGCGGGAGTAAATACGAAGAAGGGAGACA
AATCGATGGAGGAGTCCCCGGCCGCAAGCAAAAACACTCAAAAAAAGAAG
TCGGAAACA
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protein sequence of NO13G01820.1

>NO13G01820.1-protein ID=NO13G01820.1-protein|Name=NO13G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MFSRAKVAFRRAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPS
IDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHS
EEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNG
AYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGA
IAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQ
WIGALLAALALTGFYKRFRWSTLKTAKFHYVA*
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Synonyms
Publications