NO13G01820, NO13G01820 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G01820
Unique Name	NO13G01820
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1909
Alignment location	chr13:533709..535617 -

Link to JBrowse

Properties


Property Name	Value
Description	Cytochrome c1 heme protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:533709..535617 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron transfer activity
GO:0020037	heme binding
GO:0005488	binding
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036909	Cyt_c-like_dom_sf
IPR021157	Cyt_c1_TM_anchor_C
IPR009056	Cyt_c-like_dom
IPR002326	Cyt_c1

Vocabulary: **Biological Process**
Term	Definition
GO:0006091	generation of precursor metabolites and energy

Homology

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: EWM21849.1 (cytochrome c1 heme protein [Nannochloropsis gaditana])

HSP 1 Score: 544.3 bits (1401), Expect = 2.300e-151
Identity = 262/282 (92.91%), Postives = 272/282 (96.45%), Query Frame = 0

Query:    1 MFSRAKVAFRRAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHYVA 283
            MFSRA  AF+R   +PP+ ++GKGK++GALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTH+EEEVKKIAE+YDV+DGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKAR GGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVA FLAWAAEPEHDYRKKAGVQWIGALL ALALTGFYKRFRWS LKTAKFHYVA
Sbjct:   22 MFSRAAAAFKRVRFIPPSAQDGKGKLMGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVATFLAWAAEPEHDYRKKAGVQWIGALLVALALTGFYKRFRWSPLKTAKFHYVA 303

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: GAY02770.1 (DNA-directed RNA polymerase I and III subunit RPAC1, putative [Pythium insidiosum])

HSP 1 Score: 368.6 bits (945), Expect = 1.700e-98
Identity = 176/264 (66.67%), Postives = 212/264 (80.30%), Query Frame = 0

Query:   17 PAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            P + +   KV    + G +V  GVA CS D + +++YG++H G L+S+DY +VRRG+QVY+EVCA+CH++E   FRNL+GVTH+EEE+KK+A   DV+DGPN EGEMFERPGKLSD +P PYAN EAA AANNGA PPDLSLI KAR GG DY+FALLTGY+DPPEGK +L GL YNPYF GGAIAM RQL+DGQ+EYEDGTPATTSQM+KDV+VFLAWAAEPEHD RKK G+Q I AL A + LTG+YKR +W+ LKT K  Y
Sbjct:    5 PQLMQKAAKVGAGALLGGSVLTGVAACSGDQIDALNYGFDHQGPLSSFDYASVRRGYQVYKEVCATCHSVERICFRNLIGVTHTEEELKKMAAEIDVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARPGGADYLFALLTGYVDPPEGKELLPGLYYNPYFGGGAIAMERQLRDGQIEYEDGTPATTSQMAKDVSVFLAWAAEPEHDERKKMGMQTILALSAMVLLTGYYKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: OWZ09121.1 (Cytochrome c1 [Phytophthora megakarya])

HSP 1 Score: 360.5 bits (924), Expect = 4.700e-96
Identity = 177/270 (65.56%), Postives = 211/270 (78.15%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+E+EVK++A   DVIDGPN EGEMFERPGKLSD +P PYAN EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   AL+A  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEDEVKEMAADIDVIDGPNDEGEMFERPGKLSDPLPRPYANDEAAAAANNGAIPPDLSLMVKARHAGADYLFALLTGYVDPPEGTELLDGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALVALCALTGYYKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_008915725.1 (hypothetical protein PPTG_19125 [Phytophthora parasitica INRA-310] >ETI55260.1 hypothetical protein F443_02054 [Phytophthora parasitica P1569] >ETK93166.1 hypothetical protein L915_03610 [Phytophthora parasitica] >ETL99721.1 hypothetical protein L917_03474 [Phytophthora parasitica] >ETM54763.1 hypothetical protein L914_01951 [Phytophthora parasitica] >ETM98984.1 hypothetical protein PPTG_19125 [Phytophthora parasitica INRA-310] >ETO83994.1 hypothetical protein F444_02065 [Phytophthora parasitica P1976] >ETP25064.1 hypothetical protein F441_02020 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 359.4 bits (921), Expect = 1.000e-95
Identity = 177/270 (65.56%), Postives = 209/270 (77.41%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: ETL46583.1 (hypothetical protein L916_03555 [Phytophthora parasitica])

HSP 1 Score: 359.0 bits (920), Expect = 1.400e-95
Identity = 177/270 (65.56%), Postives = 209/270 (77.41%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALRYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: POM64248.1 (Cytochrome c1, mitochondrial precursor [Phytophthora palmivora var. palmivora])

HSP 1 Score: 359.0 bits (920), Expect = 1.400e-95
Identity = 176/270 (65.19%), Postives = 210/270 (77.78%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K++A   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKEMAADVDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMVKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: CCI47620.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 358.2 bits (918), Expect = 2.300e-95
Identity = 177/266 (66.54%), Postives = 212/266 (79.70%), Query Frame = 0

Query:   15 VPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            +P A++ G     GALV+G +V  GV  C+ D +   DYG++H G L+S+DY +VRRG+QVYREVCASCH+LE   FRNLVGVTH+EE+VK +A   DV DGPN +GEMF+RPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR GGVDY+FALLTGY+DPPEGK +LSGL YNPYF GGAIAM RQLQDGQ++YEDGTPATTSQM+KDVAVFLAWAAEPEHD RKK G++ + A+ A   LTG+YKR +W+ LK+ K  Y
Sbjct:    4 LPHAIRRGVQIGAGALVSG-SVLTGVTECNDDALSIPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLVGVTHTEEQVKALAADVDVEDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVDPPEGKELLSGLYYNPYFSGGAIAMERQLQDGQIDYEDGTPATTSQMAKDVAVFLAWAAEPEHDERKKQGMKVLLAMGALALLTGYYKRLKWAPLKSRKISY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: ETP53067.1 (hypothetical protein F442_02007 [Phytophthora parasitica P10297])

HSP 1 Score: 357.5 bits (916), Expect = 3.900e-95
Identity = 176/270 (65.19%), Postives = 209/270 (77.41%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG++KR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYHKRLKWAPLKTRKITY 268

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: KUF88411.1 (Cytochrome c1 [Phytophthora nicotianae])

HSP 1 Score: 357.5 bits (916), Expect = 3.900e-95
Identity = 174/253 (68.77%), Postives = 203/253 (80.24%), Query Frame = 0

Query:   28 GALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            GAL+ G +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+EEE+K IA   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:   44 GALLGG-SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEEELKAIAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMAKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 295

[Close]

BLAST of NO13G01820 vs. NCBI_GenBank
Match: XP_009539528.1 (hypothetical protein PHYSODRAFT_356216 [Phytophthora sojae] >EGZ05019.1 hypothetical protein PHYSODRAFT_356216 [Phytophthora sojae])

HSP 1 Score: 356.7 bits (914), Expect = 6.700e-95
Identity = 175/270 (64.81%), Postives = 209/270 (77.41%), Query Frame = 0

Query:   11 RAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHSEEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQWIGALLAALALTGFYKRFRWSTLKTAKFHY 281
            RA ++  A K G G ++G      +V  GV   S+D + ++ YG++H G L+S+DY +VRRG+QVYREVCASCH+L+   FRNLVGVTH+E E+K++A   DV+DGPN EGEMFERPGKLSD +P PY N EAA AANNGA PPDLSL+ KAR  G DY+FALLTGY+DPPEG  +L GL YNPYF GGAIAM RQLQDGQ+EYEDGTP TTSQM+KDV+VFLAWAAEPEHD RKK G+Q   ALLA  ALTG+YKR +W+ LKT K  Y
Sbjct:    4 RAKLLQRAAKVGAGALLGG-----SVLTGVTAFSSDQIEALHYGFDHQGPLSSFDYASVRRGYQVYREVCASCHSLDRICFRNLVGVTHTEAELKEMAADIDVVDGPNDEGEMFERPGKLSDPLPRPYPNDEAAAAANNGAIPPDLSLMVKARHAGADYLFALLTGYVDPPEGTELLPGLYYNPYFGGGAIAMERQLQDGQIEYEDGTPCTTSQMAKDVSVFLAWAAEPEHDVRKKQGMQTTIALLALCALTGYYKRLKWAPLKTRKITY 268

The following BLAST results are available for this feature:

BLAST of NO13G01820 vs. NCBI_GenBank

BLAST of NO13G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM21849.1	2.300e-151	92.91	cytochrome c1 heme protein [Nannochloropsis gadita...	[more]
GAY02770.1	1.700e-98	66.67	DNA-directed RNA polymerase I and III subunit RPAC...	[more]
OWZ09121.1	4.700e-96	65.56	Cytochrome c1 [Phytophthora megakarya]	[more]
XP_008915725.1	1.000e-95	65.56	hypothetical protein PPTG_19125 [Phytophthora para...	[more]
ETL46583.1	1.400e-95	65.56	hypothetical protein L916_03555 [Phytophthora para...	[more]
POM64248.1	1.400e-95	65.19	Cytochrome c1, mitochondrial precursor [Phytophtho...	[more]
CCI47620.1	2.300e-95	66.54	unnamed protein product [Albugo candida]	[more]
ETP53067.1	3.900e-95	65.19	hypothetical protein F442_02007 [Phytophthora para...	[more]
KUF88411.1	3.900e-95	68.77	Cytochrome c1 [Phytophthora nicotianae]	[more]
XP_009539528.1	6.700e-95	64.81	hypothetical protein PHYSODRAFT_356216 [Phytophtho...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL134	nonsL134	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL131	nonsL131	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR026	ncniR026	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR070	ngnoR070	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR069	ngnoR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001728	NSK001728	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO13G01820.1	NO13G01820.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|596446	gene_6823	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100051g28	gene8602	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO13G01820.1	NO13G01820.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO13G01820 ID=NO13G01820|Name=NO13G01820|organism=Nannochloropsis oceanica|type=gene|length=1909bp
ACTACAGCCTTTGGGTAACCCCTCCAAGAGGATGTTTTCTCGCGCGAAAG
TGGCCTTTAGGCGGGCCGCGGTCGTCCCGCCCGCCGTCAAGgtatgttgt
tgggagggaggaatcgaggcggatgactacagggttctagtatcgcaccg
cggcaaataggattgaggcttcgcattcgataccgcgtgctcatgcttga
cctcttctacacacacgcacgttacaatgcctcctaacgacccatagGAG
GGTAAGGGCAAGGTGATCGGTGCCCTGGTAGCAGGCACGGCAGTGGCAGG
CGGGGTCGCCGTGTGCAGTGCGGACCACGTCCCTTCGATTGATTACGGAT
GGAACCACCACGGTCTCCTGGCGTCGTATGACTACCCTGCgtaagttctg
cagctaagagtgtcatgcttgcccggagggtactttggggcgtcgagagt
ggcgtgacgtgcacggggttcttttctctgaggccttttttttcccgtgt
ggcaggctgcaccgcatcggaggatgtggaggaagtggagccatcggtct
tgcctcgtttgaatctttctcgagatctactgttgtgacgcacatttttt
tcgactcctactttccttttctggttcaccaaaaattcaccttttttccc
tccctcttcccctccctcccttcctcgacacctcacctgcagCGTACGCC
GCGGCTTCCAAGTCTACCGCGAAGTCTGCGCATCTTGCCACGCCCTCGAG
CACACCTACTTTCGCAATCTGGTAGGGGTGACCCATTCCGAGGAGGAGGT
GAAGAAGATTGCTGAGGCGTATGATGTCATCGATGGCCCTAACGCCGAGG
GAGAGATGTTTGAGCGCCCTGGAAAGgtacatccttccctcccttcctcc
cttcgtgttcacttggattttccttcccttttccataatatcttgagtcg
tatatctctttctaacgtgacacttgccccctcccccctcccccctccct
acctccctccctccctgcctccctgtgccttccttcagTTGTCCGACAAG
ATTCCGGGCCCCTACGCCAACAAGGAAGCTGCCCGCGCTGCGAACAATGG
AGCGTACCCTCCCGACCTCTCCCTCATCACCAAGGCGCGTGGTGGTGGGG
TTGACTACATTTTTGCGTTGCTGACTGGGTACATCGACCCCCCCGAGGGA
AAGGCGATCCTTAGCGGGCTTAACTACAACCCGTACTTCCCTGGAGGAGC
CATCGCGATGGCAAGGCAGCTTCAAGACGGGCAGTTGGAGTACGAGGACG
GGACGCCCGCCACAACCTCGCAGATGTCGAAGGACGTGGCTGTCTTCCTG
GCTTGGGCTGCAGAGCCTGAACATGACTACAGGAAGAAGGCGGGTGTGCA
GTGGATTGGGGCGTTGCTAGCTGCTTTAGCCTTGACGGGTTTCTACAAGC
GGTTCAGGTGGTCGACGCTGAAGACGGCCAAGTTCCATTATGTGGCGTAA
GGGAGGGACGTAGGGAGGAAGGGGTGTGGTGGGTGGCGCAGCATTGGTTG
GGGTCTTGATCGGGTTTATGAGGTCTCGGGGCTCGACGGTTCAGGCGGCT
AAGTTTCGTCAAGGAGGGACCTTCTACCTGTTAGCTCTGCCCGGTGGATG
CATGTATGGTTGCCGATGCCCGATGGGTCTGTGTGTGGTTCAATGAGAGA
GAGAGGCCGTATATAATAGAGGGAGAGAGAAGATGGAAACCAAGACTTAA
GGGATTGAAGGAGGGAGGGCGCCAAAGATGATAAACGAATGGGAGTAAAC
GCCCGCATTTTAATAGATACCAGCGGGAGTAAATACGAAGAAGGGAGACA
AATCGATGGAGGAGTCCCCGGCCGCAAGCAAAAACACTCAAAAAAAGAAG
TCGGAAACA

protein sequence of NO13G01820.1

>NO13G01820.1-protein ID=NO13G01820.1-protein|Name=NO13G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MFSRAKVAFRRAAVVPPAVKEGKGKVIGALVAGTAVAGGVAVCSADHVPS
IDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHS
EEEVKKIAEAYDVIDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNG
AYPPDLSLITKARGGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGA
IAMARQLQDGQLEYEDGTPATTSQMSKDVAVFLAWAAEPEHDYRKKAGVQ
WIGALLAALALTGFYKRFRWSTLKTAKFHYVA*

Synonyms

Publications