NO13G01790, NO13G01790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01790 vs. NCBI_GenBank
Match: EWM21826.1 (mitochondrial inner membrane protease atp23 [Nannochloropsis gaditana]) HSP 1 Score: 382.5 bits (981), Expect = 9.300e-103 Identity = 174/195 (89.23%), Postives = 189/195 (96.92%), Query Frame = 0 Query: 34 ASKYAIRLFGPKDDHSICKIYIEKAKKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 AS+YAIRLFGPKDDHSICK+Y EKAKKTPRV+ELVGAI+DLGC ID+DTMV+CR+C+IAATGGFIANHQGLKEG+Y+P++VVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNW+SCYHYACTEIRASTLSGECDF+EEFDRGNFGMRAQHQECVRRRAELSM V ESCK +AKEVIEKVF RCYQDTAPYDKIP Sbjct: 32 ASRYAIRLFGPKDDHSICKLYTEKAKKTPRVRELVGAISDLGCTIDIDTMVECRQCNIAATGGFIANHQGLKEGEYRPRIVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWQSCYHYACTEIRASTLSGECDFIEEFDRGNFGMRAQHQECVRRRAELSMQVAESCKDRAKEVIEKVFKRCYQDTAPYDKIP 226
BLAST of NO13G01790 vs. NCBI_GenBank
Match: XP_009514877.1 (hypothetical protein PHYSODRAFT_539065 [Phytophthora sojae] >EGZ27602.1 hypothetical protein PHYSODRAFT_539065 [Phytophthora sojae]) HSP 1 Score: 164.9 bits (416), Expect = 3.000e-37 Identity = 82/184 (44.57%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 48 HSICKIYIEKA-KKTPRVQELVGAITDLGCPID--LDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 H C+ EKA K RV+ LV A+ +GC ++ + VDC GGF + +G KP VV+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ N++CKGKA E I+KVF CY+D +PY +IP Sbjct: 22 HQKCEDMREKALTKCSRVKFLVNAMEKMGCSLEPGFFSSVDCEG---KINGGFHLDDEG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRNNFNVSKQHQLCTRRRAKLSIEQNDTCKGKADECIDKVFDSCYRDWSPYREIP 196
BLAST of NO13G01790 vs. NCBI_GenBank
Match: XP_002997689.1 (mitochondrial inner membrane protease ATP23 [Phytophthora infestans T30-4] >EEY67990.1 mitochondrial inner membrane protease ATP23 [Phytophthora infestans T30-4]) HSP 1 Score: 163.3 bits (412), Expect = 8.800e-37 Identity = 80/185 (43.24%), Postives = 118/185 (63.78%), Query Frame = 0 Query: 45 KDDHSICKIYIEKA-KKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 ++ H C+ EKA K RV+ LV A+ +GC ++ KC GGF + +G KP VV+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ N +CKG+A E I+KVF CY+D +PY +IP Sbjct: 19 EERHQKCEDMREKALTKCSRVKFLVDAMEKIGCSLE-PVFFSSVKCEGKINGGFHLDDEG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNGACKGRADECIDKVFDSCYRDWSPYREIP 196
BLAST of NO13G01790 vs. NCBI_GenBank
Match: POM63881.1 (Mitochondrial inner membrane protease ATP23 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 162.9 bits (411), Expect = 1.200e-36 Identity = 82/187 (43.85%), Postives = 120/187 (64.17%), Query Frame = 0 Query: 45 KDDHSICKIYIEKA-KKTPRVQELVGAITDLGCPID--LDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 ++ H C+ EKA K RV+ LV A+ +GC + + VDC GGF + +G KP VV+C++++ ++ +TLAHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ NE+CKG+A E I+KVF CY+D +P+ +IP Sbjct: 18 EERHQKCEDMREKALNKCSRVKFLVDAMDKMGCSLQPGFFSSVDCEG---KINGGFHLDDEG------KPGVVLCQNHIPDQEWMDRTLAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNEACKGRADECIDKVFDACYRDWSPFREIP 195
BLAST of NO13G01790 vs. NCBI_GenBank
Match: ETP41794.1 (hypothetical protein F442_11208 [Phytophthora parasitica P10297]) HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36 Identity = 80/182 (43.96%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 48 HSICKIYIEKA-KKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 H C+ EKA K RV+ LV A+ +GC ++ +C GGF + G KP VV+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ N++CKG+A E IEKVF CY+D +PY +IP Sbjct: 22 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRADECIEKVFDSCYRDWSPYREIP 196
BLAST of NO13G01790 vs. NCBI_GenBank
Match: XP_012201098.1 (hypothetical protein SPRG_06329 [Saprolegnia parasitica CBS 223.65] >KDO28278.1 hypothetical protein SPRG_06329 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 162.2 bits (409), Expect = 2.000e-36 Identity = 76/170 (44.71%), Postives = 109/170 (64.12%), Query Frame = 0 Query: 60 KTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNW-RSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 K +VQ LV + +GC ID T + C+ GGF N G P VV+C++++ ++ +T+AHEL+HA+D CRA +NW R C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+ N C+GK ++ +EKVF CY+DT P+ ++P Sbjct: 35 KCSKVQFLVEIMDRMGCKIDPKTFFKSQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTVAHELIHAFDHCRANINWERDCDQHACSEIRAAALSGDCDWKFEVMRGHFSIPKQHQECVRRRAVLSLQYNPMCQGKEEKCVEKVFETCYKDTLPFPEMP 198
BLAST of NO13G01790 vs. NCBI_GenBank
Match: XP_008605560.1 (hypothetical protein SDRG_01788 [Saprolegnia diclina VS20] >EQC40716.1 hypothetical protein SDRG_01788 [Saprolegnia diclina VS20]) HSP 1 Score: 161.4 bits (407), Expect = 3.400e-36 Identity = 76/170 (44.71%), Postives = 108/170 (63.53%), Query Frame = 0 Query: 60 KTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNW-RSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 K +VQ LV + +GC ID T + C+ GGF N G P VV+C++++ ++ +T+AHEL+HA+D CRA +NW R C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+ N C+GK + +EKVF CY+DT P+ ++P Sbjct: 35 KCSKVQFLVEIMDRMGCKIDPKTFFKSQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTVAHELIHAFDHCRANINWERDCDQHACSEIRAAALSGDCDWKFEVMRGHFSIPKQHQECVRRRAVLSLQYNPMCQGKEDKCVEKVFETCYKDTLPFPEMP 198
BLAST of NO13G01790 vs. NCBI_GenBank
Match: XP_008907301.1 (hypothetical protein PPTG_13411 [Phytophthora parasitica INRA-310] >ETI43903.1 hypothetical protein F443_11301 [Phytophthora parasitica P1569] >ETK83951.1 hypothetical protein L915_11012 [Phytophthora parasitica] >ETL90527.1 hypothetical protein L917_10816 [Phytophthora parasitica] >ETM43796.1 hypothetical protein L914_10850 [Phytophthora parasitica] >ETN07544.1 hypothetical protein PPTG_13411 [Phytophthora parasitica INRA-310] >ETO72558.1 hypothetical protein F444_11367 [Phytophthora parasitica P1976] >ETP13727.1 hypothetical protein F441_11221 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 161.4 bits (407), Expect = 3.400e-36 Identity = 79/182 (43.41%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 48 HSICKIYIEKA-KKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 H C+ EKA K RV+ LV A+ +GC ++ +C GGF + G KP VV+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ N++CKG+A E I+KVF CY+D +PY +IP Sbjct: 22 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRADECIDKVFDSCYRDWSPYREIP 196
BLAST of NO13G01790 vs. NCBI_GenBank
Match: KUF81664.1 (Mitochondrial inner membrane protease ATP23 [Phytophthora nicotianae]) HSP 1 Score: 161.4 bits (407), Expect = 3.400e-36 Identity = 79/182 (43.41%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 48 HSICKIYIEKA-KKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNWRSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 H C+ EKA K RV+ LV A+ +GC ++ +C GGF + G KP VV+C++++ ++ +T+AHEL+HA+D CR K++W C H+AC+EIRA+ LSG+C++ EF R NF + QHQ C RRRA+LS+ N++CKG+A E I+KVF CY+D +PY +IP Sbjct: 194 HQECEDMREKALTKCSRVKFLVDAMEKMGCSLE-PGFFSSVECEGKINGGFHLDDDG------KPGVVLCQNHIPDQEWMDRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRADECIDKVFDSCYRDWSPYREIP 368
BLAST of NO13G01790 vs. NCBI_GenBank
Match: OQR99734.1 (mitochondrial inner membrane protease ATP23 [Achlya hypogyna]) HSP 1 Score: 159.1 bits (401), Expect = 1.700e-35 Identity = 74/171 (43.27%), Postives = 110/171 (64.33%), Query Frame = 0 Query: 59 KKTPRVQELVGAITDLGCPIDLDTMVDCRKCSIAATGGFIANHQGLKEGDYKPKVVVCEDNLLGSHYVAQTLAHELVHAYDQCRAKVNW-RSCYHYACTEIRASTLSGECDFVEEFDRGNFGMRAQHQECVRRRAELSMMVNESCKGKAKEVIEKVFARCYQDTAPYDKIP 229 +K +VQ LV + +GC I+ T + C+ GGF N G P VV+C++++ ++ +T+AHEL+HA+D CRAK++W R C +AC+EIRA+ LSG+CD+ E RG+F + QHQECVRRRA LS+ N C+GK + ++KVF CY+DT P+ ++P Sbjct: 34 QKCSKVQFLVEIMDRMGCKINPQTFFKAQHCNGNINGGFSLNEDG------SPSVVLCQNHIQDQEWMDRTMAHELIHAFDHCRAKIDWERDCDQHACSEIRAAALSGDCDWKYEVLRGHFSIPKQHQECVRRRAILSLQFNPMCEGKEAKCVDKVFDTCYKDTLPFPEMP 198 The following BLAST results are available for this feature:
BLAST of NO13G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01790 ID=NO13G01790|Name=NO13G01790|organism=Nannochloropsis oceanica|type=gene|length=5914bpback to top protein sequence of NO13G01790.1 >NO13G01790.1-protein ID=NO13G01790.1-protein|Name=NO13G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bpback to top Synonyms
Publications
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