NO13G01770, NO13G01770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01770 vs. NCBI_GenBank
Match: EWM21825.1 (rab7 family gtpase [Nannochloropsis gaditana]) HSP 1 Score: 397.9 bits (1021), Expect = 2.000e-107 Identity = 187/209 (89.47%), Postives = 198/209 (94.74%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKGPKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYD+TNPKSF+NLEHWRTDFLHNASPPDPDNFPF+VLGNKAD+E++RKV K KA+ WTKSKGPK +PYFETSAKDATRVE AFLEAAQLAL +VSQEKDDYFPDTINL+QP RR AE + CC Sbjct: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDMTNPKSFDNLEHWRTDFLHNASPPDPDNFPFIVLGNKADMEADRKVPKHKALTWTKSKGPKPLPYFETSAKDATRVEAAFLEAAQLALEQVSQEKDDYFPDTINLSQPATRRSAEPAGCC 209
BLAST of NO13G01770 vs. NCBI_GenBank
Match: CBN76190.1 (Rab7, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 286.2 bits (731), Expect = 8.300e-74 Identity = 138/213 (64.79%), Postives = 165/213 (77.46%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKGPKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDD-YFPDTINLAQ---PMPRRGAESSACC 210 MA R++ L K IILGDSGVGKT LMNQYV KRF YKATIGADFLTKD +IDDKLVTLQIWDTAGQE+FQSLG AFYRGA+ C+LVYDITNPKSFE L+ WR +FLH A+P DPDNFPF+++GNK D ESER+V++Q+A+ W KSKG I Y ETSAK+A +VEGAFLE Q+AL +Q+ + Y P+ I L+Q P + + S CC Sbjct: 1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQIWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQAAPMDPDNFPFVLIGNKVDRESERRVSRQRALQWCKSKGSTPISYIETSAKEAVKVEGAFLEVVQMALINSAQQPPEIYVPEPITLSQAQTPYQSQSSVDSMCC 213
BLAST of NO13G01770 vs. NCBI_GenBank
Match: XP_009041664.1 (hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens] >EGB03662.1 hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]) HSP 1 Score: 286.2 bits (731), Expect = 8.300e-74 Identity = 143/207 (69.08%), Postives = 166/207 (80.19%), Query Frame = 0 Query: 3 HRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMI-DDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKGPKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSAC 209 HRKKVL K IILGDSGVGKT LMNQYV KRF +YKATIGADFLTK+VMI DDKLVTLQIWDTAGQE+FQSLG AFYRGAD C+LVYDIT PKSF+NL+ WR +FL ASPPD +NFPF+VLGNK D E++R+V+K KA +W KSK + YFETSAK+A +VE AF EAAQLAL++ + E D+ P+TINL P A+SS C Sbjct: 2 HRKKVLLKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKEVMIDDDKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIVLGNKVDRENDRRVSKAKAHSWCKSKSSAPLQYFETSAKEAVQVEAAFQEAAQLALSQENTEA-DFLPETINLGVPSAGGVAKSSCC 207
BLAST of NO13G01770 vs. NCBI_GenBank
Match: ETI40100.1 (hypothetical protein F443_14406 [Phytophthora parasitica P1569] >ETK80201.1 hypothetical protein L915_14048 [Phytophthora parasitica] >ETL33625.1 hypothetical protein L916_13944 [Phytophthora parasitica] >ETM40073.1 hypothetical protein L914_13864 [Phytophthora parasitica] >ETO68808.1 hypothetical protein F444_14405 [Phytophthora parasitica P1976] >ETP09920.1 hypothetical protein F441_14284 [Phytophthora parasitica CJ01A1] >ETP37996.1 hypothetical protein F442_14249 [Phytophthora parasitica P10297]) HSP 1 Score: 276.6 bits (706), Expect = 6.600e-71 Identity = 139/210 (66.19%), Postives = 163/210 (77.62%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKG-PKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ESER+V KQ+A W +SK + I +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESERRVQKQRAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTASKR--ESSSCC 207
BLAST of NO13G01770 vs. NCBI_GenBank
Match: XP_009515216.1 (hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae] >EGZ27941.1 hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae]) HSP 1 Score: 275.4 bits (703), Expect = 1.500e-70 Identity = 138/210 (65.71%), Postives = 163/210 (77.62%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKG-PKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ESER+V K+K+ W +SK + I +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESERRVRKEKSQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTSSKR--ESSSCC 207
BLAST of NO13G01770 vs. NCBI_GenBank
Match: ETI40101.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK80202.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL33626.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM40074.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO68809.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP09921.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP37997.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 274.2 bits (700), Expect = 3.300e-70 Identity = 138/209 (66.03%), Postives = 162/209 (77.51%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKGPKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ESER+V KQ+A W +SK + +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESERRVQKQRAQEWCRSKNVQ--QHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTASKR--ESSSCC 204
BLAST of NO13G01770 vs. NCBI_GenBank
Match: XP_008910039.1 (hypothetical protein PPTG_14474 [Phytophthora parasitica INRA-310] >ETL86912.1 hypothetical protein L917_13737 [Phytophthora parasitica] >ETN04645.1 hypothetical protein PPTG_14474 [Phytophthora parasitica INRA-310]) HSP 1 Score: 273.9 bits (699), Expect = 4.300e-70 Identity = 138/210 (65.71%), Postives = 162/210 (77.14%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKG-PKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ES R+V KQ+A W +SK + I +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESGRRVQKQRAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTASKR--ESSSCC 207
BLAST of NO13G01770 vs. NCBI_GenBank
Match: OWZ17234.1 (Rab7 family GTPase [Phytophthora megakarya]) HSP 1 Score: 273.9 bits (699), Expect = 4.300e-70 Identity = 137/210 (65.24%), Postives = 163/210 (77.62%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKG-PKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D E++R+V K+KA W +SK + I +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKEADRRVHKEKAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTTSKR--ESSSCC 207
BLAST of NO13G01770 vs. NCBI_GenBank
Match: XP_002906235.1 (Rab7 family GTPase, putative [Phytophthora infestans T30-4] >EEY65636.1 Rab7 family GTPase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 272.7 bits (696), Expect = 9.500e-70 Identity = 137/210 (65.24%), Postives = 163/210 (77.62%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKG-PKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ESER+V KQ+A W +SK + I +FETSAK+AT VE AF A AL + ++D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESERRVQKQRAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSALQK--GQEDIYVPETIDLSGTSSKR--ESSSCC 206
BLAST of NO13G01770 vs. NCBI_GenBank
Match: XP_008910040.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETL86913.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN04646.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 271.6 bits (693), Expect = 2.100e-69 Identity = 137/209 (65.55%), Postives = 161/209 (77.03%), Query Frame = 0 Query: 1 MAHRKKVLFKYIILGDSGVGKTCLMNQYVQKRFDKTYKATIGADFLTKDVMIDDKLVTLQIWDTAGQEKFQSLGQAFYRGADVCMLVYDITNPKSFENLEHWRTDFLHNASPPDPDNFPFLVLGNKADLESERKVTKQKAMAWTKSKGPKAIPYFETSAKDATRVEGAFLEAAQLALARVSQEKDDYFPDTINLAQPMPRRGAESSACC 210 M+HRKKVL K IILGDSGVGKT LMNQYV ++F YKATIGADFLTK++M+DDKLVT+QIWDTAGQE+FQSLG AFYRGAD C+LVYDITNPKSFE L+ WR +FL A P DPD FPF+VLGNK D ES R+V KQ+A W +SK + +FETSAK+AT VE AF A AL + QE D Y P+TI+L+ +R ESS+CC Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQIWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPFIVLGNKVDKESGRRVQKQRAQEWCRSKNVQ--QHFETSAKEATSVEEAFQTIASSALQK-GQEDDIYVPETIDLSGTASKR--ESSSCC 204 The following BLAST results are available for this feature:
BLAST of NO13G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01770 ID=NO13G01770|Name=NO13G01770|organism=Nannochloropsis oceanica|type=gene|length=2268bpback to top protein sequence of NO13G01770.1 >NO13G01770.1-protein ID=NO13G01770.1-protein|Name=NO13G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top Synonyms
Publications
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