NO13G01760, NO13G01760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01760 vs. NCBI_GenBank
Match: CBN74492.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 341.3 bits (874), Expect = 3.900e-90 Identity = 173/383 (45.17%), Postives = 251/383 (65.54%), Query Frame = 0 Query: 2 LDLPCRFAVVDVLDVLGTNRMNIT-KNIEKWNLDEEGRRRFFQGRNREEREILHDDHH--AELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLC-KDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRL------NVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLR 375 LDLPC + VD LDVLG+NR+NIT K ++KW+LD +G ++ F GRNR++R+I+ D A L+ L ++G HA LT ++FD ++ ++FTFV+F+APWC WCQRL PT E AE +E I V VDC T LC K V AFPTL+LFN L PDY+ DRTV A ++Y+ + + + RK +PE + PGCM++GH++VNRVPGNFHIEA SK+H + +TNLSH+V+H+SFG T++ + + + + LDG ++V + YH+A HHY++VVG++Y + K YQ++ + +M Y ++VPEA+FSY ISPM+V+V+ R WY+F T + I+GGTF++VGL+D+ + R R Sbjct: 478 LDLPCEYLSVDALDVLGSNRVNITGKEVQKWHLDPQGVKQAFHGRNRQQRDIVQFDEGVVASLQDLHEDGVHAAVLTEENFDTWLLEHDFTFVAFHAPWCGWCQRLMPTLEVLAEVLEESQRGITVGTVDCTTQQNLCTKRFPVRAFPTLKLFNEEKLLKPDYSGDRTVEAFSTYLYSKADGKPMKHQRKGRKGFPEVGLHDDKWPGCMVTGHIMVNRVPGNFHIEAASKSHTFHGATTNLSHIVHHMSFGNDPPRRTQTKINRLTEDLRQNAPLDGNVYVANAYHQAPHHYLRVVGSMYHLSPM--KTPWHGYQIVANSQMMLYDEEEVPEARFSYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSMVGLVDAAVFRASR 858
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_002295232.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87536.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 337.4 bits (864), Expect = 5.700e-89 Identity = 173/386 (44.82%), Postives = 246/386 (63.73%), Query Frame = 0 Query: 1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQ--NGE-HAIPLTADSFDEY-MQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVE--HPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG-----PLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRP 376 + DL C +A VD+ D LGTN+ NITK+I KWNLD++G+R+ F GRN E+R + H++H L+ L GE HA+ L +S E+ + N + FYAPWC+WCQRL PTWE FA V E I + V KVDCVTH QLCKDQ+V AFPTLR F + PDY DRTV AL Y RR+ N D E+ E HPGC++SGHL+VNRVPG F IEARS H L++ TNL+H V+ L+FG P + VL + ++ +N + + + E+H+A HH++K++ T + + + + YQ+L ++ ++ Y +VPE +FS+++SPM+V V + GR+WYE+ TSL I+GGT+T +GL+++TL R+ +P Sbjct: 108 LYDLHCDYASVDIWDTLGTNQQNITKDIVKWNLDDQGQRKKFAGRNAEQRAVTHEEHDETLQDLADALGGELHAVALDPESIVEFHKRHNGQAIIDFYAPWCIWCQRLEPTWEKFARQVSDERINLGVGKVDCVTHAQLCKDQRVMAFPTLRWFENGKAVMPDYRGDRTVDALVDYAKRRVG-----SNEGSNDEEFEEDHHPGCLISGHLMVNRVPGRFQIEARSVNHELHSAMTNLTHRVHDLTFGALSGPPGHMLHVLPFFDTVPEKYKHTNPMQDKYYPTYEFHQAFHHHLKIIST--HIDYLFSRSTVL-YQILEQSQLVFYEEVNVPEIQFSFDLSPMSVNVSKEGRKWYEYVTSLCAIIGGTYTTLGLINATLLRIFKP 485
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_009040624.1 (hypothetical protein AURANDRAFT_55105 [Aureococcus anophagefferens] >EGB04710.1 hypothetical protein AURANDRAFT_55105 [Aureococcus anophagefferens]) HSP 1 Score: 325.5 bits (833), Expect = 2.200e-85 Identity = 159/325 (48.92%), Postives = 217/325 (66.77%), Query Frame = 0 Query: 72 IPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVE------------AESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDR----EYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGK-EDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRPSTKL 380 +PL +F+ ++ N + FV+F+APWC+WCQRL PTWEA AE VE + SI + V KVDCV + LC Q++ AFPTLR F A DY DRTVAA+ ++ +++ +E+ ++W R + E EHPGCM+SGH+LVNRVPGNFHIEARS HNLNA TNLSHVVNHLSFG ++ ++ K+ +F + LDG +FV +YH+ HHHY KVV T +EV K ++ YQML ++ +M Y DVPEAKFSY++SPMAV+V GRRWY+F TS+ I+GGTFTVVG++D+ L+++++ +L Sbjct: 1 MPLDETNFESFLSENPYVFVNFFAPWCIWCQRLEPTWEAMAEEVERLNREVEQVDERSTSIDVDVVKVDCVANRNLCGTQRIQAFPTLRFFKDAQQYGIDYKQDRTVAAMVDFLKQKVELEKTMEDWHPRRKQRMLEIKEHPGCMVSGHVLVNRVPGNFHIEARSIHHNLNAAMTNLSHVVNHLSFGTPLAKDMQRKVSKY-PQFQSVHPLDGGIFVSRDYHQVHHHYSKVVSTHFEVGGMMTKSREIVGYQMLAQSQIMHYNEMDVPEAKFSYDLSPMAVLVSSKGRRWYDFVTSVCAIIGGTFTVVGIVDAVLYKIIKGGKQL 324
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_009040032.1 (hypothetical protein AURANDRAFT_31008, partial [Aureococcus anophagefferens] >EGB05387.1 hypothetical protein AURANDRAFT_31008, partial [Aureococcus anophagefferens]) HSP 1 Score: 324.3 bits (830), Expect = 5.000e-85 Identity = 165/375 (44.00%), Postives = 229/375 (61.07%), Query Frame = 0 Query: 4 LPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPL-PPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREY-----VEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRL 373 L C +A VD+ D +G N+ N+T+NIEKW LDE+G +R +QGRNR +I HD HH +E + NG H + AD ++ + +E+ FV FYAPWC++CQ L TWEA AE +E + + VA VDCV + C D KV FPTLR ++ + +Y DRTVAAL +VTR+L E + +PE + +HPGC++SG LLVNRVPGNFH+ A S+ H+LN + TNLSH V+HLSFG D +L +++LDG + D+YH A+ H+V +V T Y + W ++ +Q L ++ YA PEA+FSY+ISPMAV+V +WY+F TSL I+GGTF + L + T RL Sbjct: 71 LHCDYASVDLWDKIGRNQANVTQNIEKWQLDEDGVKRMYQGRNRRAFDIDHDVHHPPIEEMHANGVHVWHVNADEWEGLHEHHEYVFVDFYAPWCLYCQSLRSTWEALAEELEKRDLGVAVAAVDCVDNEAFCHDMKVQTFPTLRFYHHGEQVNEGEYRFDRTVAALTDFVTRKLESENIYRQYPEARVAHAANWNTDHPGCLVSGFLLVNRVPGNFHVMAHSRHHSLNTLRTNLSHTVHHLSFGVPLTDAQHRKLATIDVRHARTDTLDGEDYYHDDYHYAYQHFVHIVPTKYNLGVFW-RDRFAAFQTLHSHHLLKYAEHVPPEARFSYDISPMAVVVDTVRVKWYDFLTSLLAIVGGTFALFKLANDTAARL 444
BLAST of NO13G01760 vs. NCBI_GenBank
Match: EJK46164.1 (hypothetical protein THAOC_35181 [Thalassiosira oceanica]) HSP 1 Score: 305.8 bits (782), Expect = 1.800e-79 Identity = 160/379 (42.22%), Postives = 225/379 (59.37%), Query Frame = 0 Query: 7 RFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVL--LQNGE-HAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLY--QDEVLTR---LEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRLLRPST 378 R DV D LGTN+ NITK++ K+++D G + F GRNRE+ ++ H H LE + GE H+I LT + + + + FV ++APWCVWCQRLAPTWE FAE V + + VAKVDCV H QLCKD+++ AFPTLR + + PDY DRTV AL Y TRRL ++ D HPGC +SGHL+VNRVPGN H+EA+S H +N+ TNL+H V+HLSFG Q L R L EF +N + GR+F +H++ HH++KVV T + R YQ+L E+ ++ Y + +VPE KF +++SPM + V R WY++ T+ I+GG + +GL++ L + +P + Sbjct: 112 RLGYADVWDSLGTNQQNITKDVTKYHIDRNGEQASFHGRNREQTKVDHQVHDETLEDIADANGGELHSIDLTPEKRKDTFETWDVVFVDYFAPWCVWCQRLAPTWEKFAEQVTKRHVQLGVAKVDCVAHAQLCKDERIMAFPTLRWYEHGRAVMPDYKGDRTVGALVEYATRRLGEGQE-------DESEDHHPGCQVSGHLMVNRVPGNLHMEAKSIHHEINSAMTNLTHRVDHLSFGDERGPQGHFLDRFAFLGGVPDEFKHTNPMKGRLFQTHRFHESFHHHLKVVTTTIDYLFR----PTALYQILAESQLVLYELQEVPEIKFLWDMSPMGIEVDVERRPWYDYITTCLAIVGGAYASLGLINRALLAMFKPKS 479
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_002177433.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51896.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 281.6 bits (719), Expect = 3.700e-72 Identity = 162/439 (36.90%), Postives = 244/439 (55.58%), Query Frame = 0 Query: 1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHH--AELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFA-----------------------EHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLP-PDYNTDRTVAALASYVTR--------------------------RLNVE----EKRKNWPERDREY----------VEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSL---DGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLH 371 ++DL C +AVVDV+ VLGT + N++ +I KW +D EG R+ + GRN+++++I D + +E L +GE A+ L ++ + ++ ++ FV FYA WC C+ LAPTWE A EH + +P+ +AK+DCV H Q+C Q + +PTLRLF DY DRTV A A ++ + RL+ E ++ W E+ + + EHPGC ++GHLL++RVPGNFHI+ARS H+L TN+SHVV+HLS G + ++ + EK V L +G +V E H+A+HHY+KV+ T + ++GK D+ YQ+L + + Y D +PEAKF +++SP+AV + T RRWY++ TS+ I+GGTFTVVGLL+ST+H Sbjct: 76 LMDLRCEYAVVDVVSVLGTEQ-NVSSHITKWGVDAEGVRKRYAGRNKDQKDIKMFDSSVTSTIEELYSDGEDAVSLDEETLEYALRDQQYLFVDFYASWCSHCRALAPTWETLAEVMSDVAEDLVEQHDHEYSEEEYEHAKKVEMPVMIAKIDCVLHKQVCMKQGILGYPTLRLFVDGERWKGGDYRGDRTVVAFADWLQQVEDAHKTDTENSSAKNVQLAHMAAKDRLDSEDEGSDEEHEWAEKVKRHKQRLHHSWVDAEHPGCNIAGHLLLDRVPGNFHIQARSPHHDLVPHMTNVSHVVHHLSIGEPVAERLIEQ-EKVILPEDVKRKLKPMNGNAYVTKELHEAYHHYLKVITTNVD-GLKFGKRDLRAYQILQSSQLSFYRNDIIPEAKFVFDLSPVAVSYRTTSRRWYDYFTSILAIIGGTFTVVGLLESTIH 511
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_002287517.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94960.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 276.6 bits (706), Expect = 1.200e-70 Identity = 155/392 (39.54%), Postives = 234/392 (59.69%), Query Frame = 0 Query: 1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREI-LHDDHHAE-LEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAE--HVEAES---IPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVE------HPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNS--LDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWG-------KEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLH 371 M+DL C +A +DV+ VLGT + N+T++++K+ +D+ G R+ + RN+ + ++ L D E +E L +GE AI L + + +Q N + FV F+A WC C+ LAPTWE AE + AES +P+ + K+DCV H LC+ ++ A+PTL+ F + DY RTV +A ++ + K K +D E HPGC +SG LLV+R PGNFHI+A+SK H+L A TN+SH++NHLSFG + L K + ++ + DG +++ H+AHHHY+KV+ T +E P++ KE YQ+L + + Y D VPEAKF+Y++SP+AV + R WY++ TSL I+GGTFTVVG+L+S +H Sbjct: 70 MMDLKCDYATIDVVSVLGT-QQNVTQHVQKFPIDQYGVRQRMKARNKNQHDVQLFDSTIQETIEELHADGEDAISLDETTLNVALQENTYVFVDFFANWCSHCRDLAPTWETLAEVMYEAAESRVQLPVMIGKIDCVDHGGLCQRMQIQAYPTLKFFVDGEEM-GDYRGHRTVIEMAHFIA-EMEKTHKGKGGVAQDATESEYSVLKNHPGCQISGFLLVDRAPGNFHIQAQSKGHDLAAHMTNVSHIINHLSFGKPFSKYFLKDGLKNTPPGFLETTKPFDGNVYITQNEHEAHHHYLKVITTEFE-PEKGAQNSKYNKKEPSRAYQILQSSQLSLYRSDIVPEAKFTYDLSPIAVSYNKKYRHWYDYFTSLMAIIGGTFTVVGMLESGIH 457
BLAST of NO13G01760 vs. NCBI_GenBank
Match: OEU08711.1 (DUF1692-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 273.1 bits (697), Expect = 1.300e-69 Identity = 168/459 (36.60%), Postives = 246/459 (53.59%), Query Frame = 0 Query: 1 MLDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREI-LHD-DHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAE-------------------------------------HVEAESIPIKVAKVDCVTHTQLC-KDQKVHAFPTLRLFNRASPLP--PDYNTDRTVAALASYV--------------------TRRLNV--------------EEKRKN-----------WPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFG--PLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVDDVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLH 371 M DL C +AV+DV+ VLGT++ N+T ++ KWN+D +G R+ ++GRNR +++I L D D LE L ++GE AI T + +EY + ++ FV F+A WC C+ LAPTWEA AE H + +IP+ +AKVDCV H LC +++++ A+PTLRLF LP DY RTV + ++ R L+ E KRKN W E D HPGC LSGHLL++RVPGNFHI ARSK H+L+ TN+SH+VN LS G + + ++ E S+ + +DG + + H+++HHY+KV+ T+ + YQ++P T + Y D VPEAKF Y++SP++V ++ RRWYE+ TSLF I+GG FT+VG+++S++H Sbjct: 88 MTDLSCDYAVIDVVSVLGTDQ-NVTAHVTKWNIDNKGVRKGYKGRNRNQKDITLFDVDIKETLEELHEDGEDAITFTPITIEEYKKNYDYVFVDFFASWCSHCKDLAPTWEALAEVMTEASITIVEDQQEEDAANAKXXXXXXHNYSDEDFQHAVSVNIPVIIAKVDCVDHKFLCNQEEEIRAYPTLRLFIDGKTLPGGSDYKGHRTVMEMVDWLKHMEEQHKSAMLTVGDEGEPIRTLHTAHETAKEYMGVDLEEYKRKNDKKNNNRLYNEWKESD-----HPGCQLSGHLLLDRVPGNFHILARSKHHDLSPHLTNVSHMVNSLSIGYPGIARAGAMSLPENVQSKL---SPMDGNTYTTNNLHESYHHYLKVITTI--------SPGVNLYQIIPSTQLSYYKADMVPEAKFVYDLSPISVTYRKESRRWYEYVTSLFAIIGGVFTMVGMIESSIH 529
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_005715706.1 (Protein disulfide-isomerase, PDIA-6 Membrane [Chondrus crispus] >CDF35887.1 Protein disulfide-isomerase, PDIA-6 Membrane [Chondrus crispus]) HSP 1 Score: 270.4 bits (690), Expect = 8.600e-69 Identity = 153/388 (39.43%), Postives = 220/388 (56.70%), Query Frame = 0 Query: 3 DLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFF-----QGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDR--EYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNS-LDGRMFVLDEYHKAHHHYVKVVGTLYEVPQRWGKEDMFTYQMLPETSVMSYAVD-DVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLH----RLLRPST 378 +LPCRFA V+V D LG ++N+ +I K L E +G + H+D H E + LT+ ++ +Y++ NE+TFV +Y WC +C+ P W FA+H+ + +K+A+VDC + +LC+ K+ +PT +F +PL DY +R+V A + YV EK + P D +Y GC+L G LLVNRVPGNFHI A+S AHN + STN SH+++HLSFG Q ++ + K + V+ S LD +F+ + H +H HY+KVV T Y+ ++D+ YQM TS Y D +VPE +FSY++SP AV++ + GRRWYEF TSL I+GGTFT L+D LH RL RP T Sbjct: 75 ELPCRFANVEVWDYLGNAKLNVDADISKTILGHEQNENHLTEYKDKGTVATQLVDKHEDAHLP--------EQVVELTSSNYGQYLKQNEYTFVIYYVNWCGFCKMALPVWSKFAKHLPSIRPNVKIAQVDCEKNAELCQATKITGYPTFIMFKGVNPLEEDYGGERSVEAFSKYV-------EKVSDTPPDDHNLKYQWQEGCLLGGRLLVNRVPGNFHISAKSDAHNFDQKSTNTSHLIHHLSFGGEMQHDLYMAVPK---DIRVNISPLDDILFINHKEHMSHEHYIKVVSTHYQAGSLRRRKDVLGYQM--ATSNHQYKSDPNVPETRFSYDLSPTAVVISQAGRRWYEFLTSLCAIIGGTFTTFSLMDGVLHSMQRRLARPVT 442
BLAST of NO13G01760 vs. NCBI_GenBank
Match: XP_005716385.1 (Protein disulfide-isomerase, PDIA-5 Membrane [Chondrus crispus] >CDF36566.1 Protein disulfide-isomerase, PDIA-5 Membrane [Chondrus crispus]) HSP 1 Score: 267.7 bits (683), Expect = 5.500e-68 Identity = 153/374 (40.91%), Postives = 213/374 (56.95%), Query Frame = 0 Query: 2 LDLPCRFAVVDVLDVLGTNRMNITKNIEKWNLDEEGRRRFFQGRNREEREILHDDHHAELEVLLQNGEHAIPLTADSFDEYMQANEFTFVSFYAPWCVWCQRLAPTWEAFAEHVEAESIPIKVAKVDCVTHTQLCKDQKVHAFPTLRLFNRASPLPPDYNTDRTVAALASYVTRRLNVEEKRKNWPERDREYVEHPGCMLSGHLLVNRVPGNFHIEARSKAHNLNAVSTNLSHVVNHLSFGPLYQDEVLTRLEKFSSEFYVSNSLDGRMFVLDEYHKAHHHYVKVVGTLYEVPQR--WGKEDMFTYQMLPETSVMSYAVD-DVPEAKFSYEISPMAVIVKRTGRRWYEFGTSLFGILGGTFTVVGLLDSTLHRL 373 L LPC FA VDV D LG R+++TKN+ K + R R G + + D E++ + E + + +FD+ + N +TFV F+APWC+ C +LAPTWEAFA+ V + I +KV KVDC + LC+ Q++ +PTLR++ P PDY RTV+ L S++ + K ++ GC++ G + VNRVPGNFHI A+SK H+ + + NLSHVV+H SFG V+ L N LDGR FV E H H HY+KVV T Y V + + +ED YQM TS Y D +PEAKFS+++SP AV++ + G+RWYEF TSL I+GG FTVV L D ++ + Sbjct: 74 LRLPCEFASVDVWDYLGNTRLDLTKNLHK-TMVSGPRGRDILGAYSDGNAFSNGDSEDEVKAHIGLSE-SEEIMQSNFDQKLAENAWTFVDFFAPWCIHCVKLAPTWEAFAKTVHDKDIRVKVFKVDCTKNEFLCRSQQISGYPTLRVYKGNHPQHPDYFGKRTVSTLISWMESMTHEHAHAKTRLHKEE------GCLVEGAIWVNRVPGNFHITAKSKGHDFDPKAMNLSHVVHHFSFGKPLPRRVIRHLPDDVKRNI--NPLDGRSFVNTEEHTTHEHYIKVVSTHYRVGKSSIFNREDSLGYQM--ATSNHRYKSDPGIPEAKFSFDLSPTAVVIIQGGKRWYEFVTSLCAIIGGIFTVVSLFDGAMYSI 435 The following BLAST results are available for this feature:
BLAST of NO13G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01760 ID=NO13G01760|Name=NO13G01760|organism=Nannochloropsis oceanica|type=gene|length=2743bpback to top protein sequence of NO13G01760.1 >NO13G01760.1-protein ID=NO13G01760.1-protein|Name=NO13G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bpback to top protein sequence of NO13G01760.2 >NO13G01760.2-protein ID=NO13G01760.2-protein|Name=NO13G01760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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