NO13G01590, NO13G01590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01590 vs. NCBI_GenBank
Match: XP_005852438.1 (RNA-binding protein Musashi, partial [Nannochloropsis gaditana CCMP526] >EKU23394.1 RNA-binding protein Musashi, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 367.5 bits (942), Expect = 6.000e-98 Identity = 174/192 (90.62%), Postives = 186/192 (96.88%), Query Frame = 0 Query: 41 GEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GE+N PNKIFVGGVAWHTTEEGLS+YFGKYGEL DVVLMRD+NTGGPRGFGFVSFATP A+EAAV+EAH+LDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQ+QFQDIKKVFVGGLSP+VTEEAFRAYFD FGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVL+Q H+M+GRPMDVKRAEPK+PD G Sbjct: 39 GEYNQPNKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAHMLDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQRQFQDIKKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQQHDMEGRPMDVKRAEPKVPDAG 230
BLAST of NO13G01590 vs. NCBI_GenBank
Match: EWM21822.1 (rna-binding musashi 2-like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 367.5 bits (942), Expect = 6.000e-98 Identity = 174/192 (90.62%), Postives = 186/192 (96.88%), Query Frame = 0 Query: 41 GEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GE+N PNKIFVGGVAWHTTEEGLS+YFGKYGEL DVVLMRD+NTGGPRGFGFVSFATP A+EAAV+EAH+LDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQ+QFQDIKKVFVGGLSP+VTEEAFRAYFD FGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVL+Q H+M+GRPMDVKRAEPK+PD G Sbjct: 39 GEYNQPNKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAHMLDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQRQFQDIKKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQQHDMEGRPMDVKRAEPKVPDAG 230
BLAST of NO13G01590 vs. NCBI_GenBank
Match: XP_008914218.1 (hypothetical protein PPTG_17994 [Phytophthora parasitica INRA-310] >ETI33178.1 hypothetical protein F443_20129 [Phytophthora parasitica P1569] >ETK73492.1 hypothetical protein L915_19592 [Phytophthora parasitica] >ETL80169.1 hypothetical protein L917_19323 [Phytophthora parasitica] >ETM33417.1 hypothetical protein L914_19358 [Phytophthora parasitica] >ETN00547.1 hypothetical protein PPTG_17994 [Phytophthora parasitica INRA-310] >ETO61914.1 hypothetical protein F444_20143 [Phytophthora parasitica P1976] >ETP03009.1 hypothetical protein F441_20009 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 209.9 bits (533), Expect = 1.600e-50 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQ-APAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ AP GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 296
BLAST of NO13G01590 vs. NCBI_GenBank
Match: ETL26922.1 (hypothetical protein L916_19483 [Phytophthora parasitica]) HSP 1 Score: 209.9 bits (533), Expect = 1.600e-50 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQ-APAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ AP GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 296
BLAST of NO13G01590 vs. NCBI_GenBank
Match: ETP31160.1 (hypothetical protein F442_19958 [Phytophthora parasitica P10297]) HSP 1 Score: 209.9 bits (533), Expect = 1.600e-50 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQ-APAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ AP GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 296
BLAST of NO13G01590 vs. NCBI_GenBank
Match: XP_008914219.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI33179.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK73493.1 hypothetical protein, variant [Phytophthora parasitica] >ETL80170.1 hypothetical protein, variant [Phytophthora parasitica] >ETM33418.1 hypothetical protein, variant [Phytophthora parasitica] >ETN00548.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO61915.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP03010.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 209.1 bits (531), Expect = 2.700e-50 Identity = 106/220 (48.18%), Postives = 144/220 (65.45%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 295
BLAST of NO13G01590 vs. NCBI_GenBank
Match: ETL26923.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 209.1 bits (531), Expect = 2.700e-50 Identity = 106/220 (48.18%), Postives = 144/220 (65.45%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 295
BLAST of NO13G01590 vs. NCBI_GenBank
Match: ETP31161.1 (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 209.1 bits (531), Expect = 2.700e-50 Identity = 106/220 (48.18%), Postives = 144/220 (65.45%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPKIPDGG 233 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK GG Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPKEARGG 295
BLAST of NO13G01590 vs. NCBI_GenBank
Match: OWZ10360.1 (hypothetical protein PHMEG_00016797 [Phytophthora megakarya]) HSP 1 Score: 209.1 bits (531), Expect = 2.700e-50 Identity = 109/219 (49.77%), Postives = 152/219 (69.41%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQR-EGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQ-AP--APVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPK 228 GYG+ S P Q E G GG+ P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + EAH LDGR+++VK+A+PRE+ AP + R+ G G G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ H++ G+ +++KRAEPK Sbjct: 73 GYGDYAQTSGQHPQQHMEHHGYDKNGGS----TQPGKLFIGGVSWETTEDTLRQHFGKYGSLTDAALMKDKYTGQPRGFGFVTFADASAIDRVLDEAHTLDGRSVEVKRAIPRERTAPGSSDFRSGRSGFGFGXXXGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHDIHGKSVEIKRAEPK 287
BLAST of NO13G01590 vs. NCBI_GenBank
Match: KUF99746.1 (Heterogeneous nuclear ribonucleoprotein 27C [Phytophthora nicotianae]) HSP 1 Score: 207.2 bits (526), Expect = 1.000e-49 Identity = 104/215 (48.37%), Postives = 142/215 (66.05%), Query Frame = 0 Query: 13 GYGETGNGSSATPPQREGAGTGNAGGAQGEFNNPNKIFVGGVAWHTTEEGLSNYFGKYGELVDVVLMRDRNTGGPRGFGFVSFATPEALEAAVAEAHILDGRNLDVKKAVPREQAPAPVRAIWGGTGAGPQKQFQDIKKVFVGGLSPEVTEEAFRAYFDTFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLAQPHEMDGRPMDVKRAEPK 228 GYG+ S P Q G G P K+F+GGV+W TTE+ L +FGKYG L D LM+D+ TG PRGFGFV+FA A++ + E H LDGR ++VK+A+PRE+ GG G F + KK+FVGGL+P VTE+ FR YF+ FG+ITDAVVM+DR T RSRGFGF+T+ EE+++ +V+++ HE+ G+ +++KRAEPK Sbjct: 78 GYGDYAQSSGQHPQQLMEHHHGY--DKNGSSAQPGKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRTVEVKRAIPRERTAPGSSDFRGGRGGYSSGGFTEQKKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKNHEIHGKTVEIKRAEPK 290 The following BLAST results are available for this feature:
BLAST of NO13G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01590 ID=NO13G01590|Name=NO13G01590|organism=Nannochloropsis oceanica|type=gene|length=1344bpback to top protein sequence of NO13G01590.1 >NO13G01590.1-protein ID=NO13G01590.1-protein|Name=NO13G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bpback to top Synonyms
Publications
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