NO13G01550, NO13G01550 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G01550
Unique Name	NO13G01550
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1914
Alignment location	chr13:459693..461606 -

Link to JBrowse

Properties


Property Name	Value
Description	5-nucleotidase domain-containing

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:459693..461606 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036412	HAD-like_sf
IPR008380	HAD-SF_hydro_IG_5-nucl

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Homology

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: EWM21819.1 (5 -nucleotidase domain-containing [Nannochloropsis gaditana])

HSP 1 Score: 849.7 bits (2194), Expect = 5.700e-243
Identity = 417/524 (79.58%), Postives = 462/524 (88.17%), Query Frame = 0

Query:   90 LSSITHPHPRINRLLREYLAKME-EGPPTSNSLQPPG-QEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAITRP 612
            LS ITHPHPR+NRLLREYLAKME E     NSLQ PG Q +Q +PRKDRIFVNN+INLGKVDVLG+DYDYTLVSYT KMEGLIYSMAKDYLIEHSGYP+EMKTRR YDP FA+RGLAVD+DRGW+LKLSYI+QIALRTVF GR+RL+K+EV+A YGD +H+SPQYRN H+KPLLDLF++S ACL+ADVLDYLN+L+IHHDR+AVVEDV++AI+HVH SG MHK VV+DPPTYM+PSPHLRETL RFRDVGKKLFLCSNSN+EYVSGGL+FL+G DWQEFFDVVIVSA KPGFYTS+RPFRQV + TGKIRWTEVTTLEKGKVYSHGSL+GLTKLTGW GPRVLYIGDQIWADLVG RRNQGWRTGAVIREL++EL+VQQS KYR +AH+ +TVTELLRLVQE+MEKIR+                          EADV VSDGLE+YLR+LQTEMSKMFN NFGSVFR+ GEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAI RP
Sbjct:   42 LSDITHPHPRVNRLLREYLAKMEQESADLPNSLQQPGYQVKQSLPRKDRIFVNNSINLGKVDVLGFDYDYTLVSYTHKMEGLIYSMAKDYLIEHSGYPSEMKTRRMYDPRFAVRGLAVDVDRGWVLKLSYIHQIALRTVFCGRRRLSKEEVVAAYGDGAHVSPQYRNNHMKPLLDLFALSEACLVADVLDYLNELNIHHDRQAVVEDVLQAISHVHTSGEMHKTVVRDPPTYMLPSPHLRETLMRFRDVGKKLFLCSNSNFEYVSGGLQFLLGADWQEFFDVVIVSAGKPGFYTSNRPFRQVDKRTGKIRWTEVTTLEKGKVYSHGSLEGLTKLTGWQGPRVLYIGDQIWADLVGGRRNQGWRTGAVIRELEYELVVQQSKKYRQYAHQAVTVTELLRLVQEEMEKIRT--------------------------EADVRVSDGLEEYLRYLQTEMSKMFNANFGSVFRSGGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAIGRP 539

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: XP_005853545.1 (5 -nucleotidase domain-containing [Nannochloropsis gaditana CCMP526] >EKU22814.1 5 -nucleotidase domain-containing [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 595.1 bits (1533), Expect = 2.500e-166
Identity = 281/339 (82.89%), Postives = 318/339 (93.81%), Query Frame = 0

Query:  166 MEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAK 505
            MEGLIYSMAKDYLIEHSGYP+EMKTRR YDP FA+RGLAVD+DRGW+LKLSYI+QIALRTVF GR+RL+K+EV+A YGD +H+SPQYRN H+KPLLDLF++S ACL+ADVLDYLN+L+IHHDR+AVVEDV++AI+HVH SG MHK VV+DPPTYM+PSPHLRETL RFRDVGKKLFLCSNSN+EYVSGGL+FL+G DWQEFFDVVIVSA KPGFYTS+RPFRQV + TGKIRWTEVTTLEKGKVYSHGSL+GLTKLTGW GPRVLYIGDQIWADLVG RRNQGWRTGAVIREL++EL+VQQS KYR +AH+ +TVTELLRLVQE+MEKIR+EAT AAAK
Sbjct:    1 MEGLIYSMAKDYLIEHSGYPSEMKTRRMYDPRFAVRGLAVDVDRGWVLKLSYIHQIALRTVFCGRRRLSKEEVVAAYGDGAHVSPQYRNNHMKPLLDLFALSEACLVADVLDYLNELNIHHDRQAVVEDVLQAISHVHTSGEMHKTVVRDPPTYMLPSPHLRETLMRFRDVGKKLFLCSNSNFEYVSGGLQFLLGADWQEFFDVVIVSAGKPGFYTSNRPFRQVDKRTGKIRWTEVTTLEKGKVYSHGSLEGLTKLTGWQGPRVLYIGDQIWADLVGGRRNQGWRTGAVIRELEYELVVQQSKKYRQYAHQAVTVTELLRLVQEEMEKIRTEATQAAAK 339

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: ETI52062.1 (hypothetical protein F443_04713 [Phytophthora parasitica P1569] >ETK91933.1 hypothetical protein L915_04600 [Phytophthora parasitica] >ETL45334.1 hypothetical protein L916_04553 [Phytophthora parasitica] >ETL98506.1 hypothetical protein L917_04432 [Phytophthora parasitica] >ETM51669.1 hypothetical protein L914_04538 [Phytophthora parasitica] >ETO80825.1 hypothetical protein F444_04753 [Phytophthora parasitica P1976] >ETP21865.1 hypothetical protein F441_04705 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 421.4 bits (1082), Expect = 5.000e-114
Identity = 227/516 (43.99%), Postives = 324/516 (62.79%), Query Frame = 0

Query:   87 PQPLSSITHPHPRINRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            PQ  +SI    P I++L+  Y   ++   P + S+Q            D +F NN + L  +DV+G+DYDYTL  Y+++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ EV+  YG S HIS   R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV +D P Y+ P+P LR  L R RD GKK FLC+NS++ Y++ GL++++GDDW+E FDVVIVSA KP FYT  R FR +     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ V ++ +Y+  A ++  + EL+R +Q +   +RSE                    P     A V   D L      LQTEM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   29 PQLRASIPSSLPAIHQLVERYERDVQTFKP-NESIQ-----------SDVVFANNHLRLSGIDVVGFDYDYTLCHYSEELQHLIYAMARDYMVSKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGGSRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRMLDIGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGSRVLYIGDNLFSDLVEPSRANGWRTGAIIRELEDEMHVHRTPEYQRLAFQISKIEELMRSIQNE---LRSE--------------------PIPQNHAFV---DQLVNIHEALQTEMENLVNVNFGSVFRADTYPSQFAFLVQRYVDIYSARLENLLEYPSNHTFYPER-IAMPHE 504

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: POM80716.1 (5'-nucleotidase domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 421.4 bits (1082), Expect = 5.000e-114
Identity = 231/532 (43.42%), Postives = 331/532 (62.22%), Query Frame = 0

Query:   71 SRSLSSTAPTKHKKHTPQPLSSITHPHPRINRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            SR   +T         PQ  SSI    P I+RL+  Y   ++   P ++S+Q            D +F NN + L  +DV+G+DYDYTL  YT++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ E++  YG S HIS Q R ++++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV  D P Y+ P+P LR  L R R+ GKK FLC+NS++ Y++ GL++++GDDW+E FDVVI SA KP FYT  R FR++     +++W  V +L +G+VY+ GS+  L+KLTGW+G RVLYIGD ++ADLV   R  GWRTGA+IREL+ E+ VQ++ +Y+  A ++  + EL+R +Q +   +RSE                       + +  V V D L      LQ EM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   16 SRVSFTTRQLSALSFVPQLRSSIPKSLPAIHRLVESYERDVQTFKP-NDSIQ-----------SDVVFANNHLRLSGIDVVGFDYDYTLCHYTEELQHLIYAMARDYMVGKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEIMELYGGSRHISVQDR-DYMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAIANVHLSGEMHKEVAHDLPKYIEPNPTLRPLLERIRNSGKKSFLCTNSSFSYINAGLKYMLGDDWRELFDVVIASARKPKFYTRQRSFRKLDTGHKQVQWHAVRSLHRGEVYTQGSVYQLSKLTGWVGNRVLYIGDNLFADLVEPSRANGWRTGAIIRELEDEMRVQRTPEYQRLAFQINKIEELMRNIQNE---LRSEP----------------------IPQNHVFV-DQLVNVHEALQMEMENLINANFGSVFRADAYPSQFAFLVQRYVDIYSARLENLLEYPSSHTFYPER-IAMPHE 506

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: ETP49773.1 (hypothetical protein F442_04768 [Phytophthora parasitica P10297])

HSP 1 Score: 421.0 bits (1081), Expect = 6.500e-114
Identity = 227/516 (43.99%), Postives = 324/516 (62.79%), Query Frame = 0

Query:   87 PQPLSSITHPHPRINRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            PQ  +SI    P I++L+  Y   ++   P + S+Q            D +F NN + L  +DV+G+DYDYTL  Y+++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ EV+  YG S HIS   R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV +D P Y+ P+P LR  L R RD GKK FLC+NS++ Y++ GL++++GDDW+E FDVVIVSA KP FYT  R FR +     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ V ++ +Y+  A ++  + EL+R +Q +   +RSE                    P     A V   D L      LQTEM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   29 PQLRASIPSSLPAIHQLVERYERDVQTFKP-NESIQ-----------SDVVFANNHLRLSGIDVVGFDYDYTLCHYSEELQHLIYAMARDYMVSKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGGSRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRMLDIGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGSRVLYIGDNLFSDLVEPSRANGWRTGAIIRELEDEMHVHRTPEYQRLAFQISKIEELMRSIQNE---LRSE--------------------PIPQNHAFV---DQLINIHEALQTEMENLVNVNFGSVFRADTYPSQFAFLVQRYVDIYSARLENLLEYPSNHTFYPER-IAMPHE 504

[Close]

BLAST of NO13G01550 vs. NCBI_GenBank
Match: XP_008902009.1 (hypothetical protein PPTG_08999 [Phytophthora parasitica INRA-310] >ETN13014.1 hypothetical protein PPTG_08999 [Phytophthora parasitica INRA-310])

HSP 1 Score: 420.2 bits (1079), Expect = 1.100e-113
Identity = 227/516 (43.99%), Postives = 323/516 (62.60%), Query Frame = 0

Query:   87 PQPLSSITHPHPRINRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            PQ   SI    P I++L+  Y   ++   P + S+Q            D +F NN + L  +DV+G+DYDYTL  Y+++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ EV+  YG S HIS   R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV +D P Y+ P+P LR  L R RD GKK FLC+NS++ Y++ GL++++GDDW+E FDVVIVSA KP FYT  R FR +     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ V ++ +Y+  A ++  + EL+R +Q +   +RSE                    P     A V   D L      LQTEM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   29 PQLRVSIPSSLPAIHQLVERYERDVQTFKP-NESIQ-----------SDVVFANNHLRLSGIDVVGFDYDYTLCHYSEELQHLIYAMARDYMVSKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGGSRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRMLDIGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGSRVLYIGDNLFSDLVEPSRANGWRTGAIIRELEDEMHVHRTPEYQRLAFQISKIEELMRSIQNE---LRSE--------------------PIPQNHAFV---DQLVNIHEALQTEMENLVNVNFGSVFRADTYPSQFAFLVQRYVDIYSARLENLLEYPSNHTFYPER-IAMPHE 504

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BLAST of NO13G01550 vs. NCBI_GenBank
Match: POM75945.1 (ABCA1 lipid exporter, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 419.9 bits (1078), Expect = 1.500e-113
Identity = 215/470 (45.74%), Postives = 307/470 (65.32%), Query Frame = 0

Query:  133 RKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            + D +F NN + L  +DV+G+DYDYTL  YT++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ E++  YG S HIS Q R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV  D P Y+ P+P LR  L R R+ GKK FLC+NS++ Y++ GL++++GDDW+E FDVVI SA KP FYT  R FR++     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD ++ADLV   R  GWRTGA+IREL+ E+ VQ++ +Y+  A ++  + EL+R +Q +   +RSE                       + +  V V D L      LQ EM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:  754 QSDVVFANNHLRLSGIDVVGFDYDYTLCHYTEELQHLIYAMARDYMVGKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFQGRQRLSRDEIMELYGGSRHISVQDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAIANVHLSGEMHKEVAHDLPKYIEPNPTLRPLLERIRNSGKKSFLCTNSSFSYINAGLKYMLGDDWRELFDVVIASARKPKFYTRQRSFRKLDTGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGNRVLYIGDNLFADLVEPSRANGWRTGAIIRELEDEMRVQRTPEYQRLAFQINKIEELMRNIQNE---LRSEP----------------------IPQNHVFV-DQLVNVHEALQMEMENLINANFGSVFRADAYPSQFAFLVQRYVDIYSARLENLLEYPSSHTFYPER-IAMPHE 1195

[Close]

BLAST of NO13G01550 vs. NCBI_GenBank
Match: XP_008902010.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI52063.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK91934.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL45335.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL98507.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM51670.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN13015.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO80826.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP21866.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 418.7 bits (1075), Expect = 3.200e-113
Identity = 216/470 (45.96%), Postives = 306/470 (65.11%), Query Frame = 0

Query:  133 RKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            + D +F NN + L  +DV+G+DYDYTL  Y+++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ EV+  YG S HIS   R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV +D P Y+ P+P LR  L R RD GKK FLC+NS++ Y++ GL++++GDDW+E FDVVIVSA KP FYT  R FR +     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ V ++ +Y+  A ++  + EL+R +Q +   +RSE                    P     A V   D L      LQTEM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   28 QSDVVFANNHLRLSGIDVVGFDYDYTLCHYSEELQHLIYAMARDYMVSKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGGSRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRMLDIGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGSRVLYIGDNLFSDLVEPSRANGWRTGAIIRELEDEMHVHRTPEYQRLAFQISKIEELMRSIQNE---LRSE--------------------PIPQNHAFV---DQLVNIHEALQTEMENLVNVNFGSVFRADTYPSQFAFLVQRYVDIYSARLENLLEYPSNHTFYPER-IAMPHE 469

[Close]

BLAST of NO13G01550 vs. NCBI_GenBank
Match: ETP49775.1 (hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 418.3 bits (1074), Expect = 4.200e-113
Identity = 216/470 (45.96%), Postives = 306/470 (65.11%), Query Frame = 0

Query:  133 RKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            + D +F NN + L  +DV+G+DYDYTL  Y+++++ LIY+MA+DY++    YP  +   + YDP FAIRGL +D  +G L K+S   +++   VF GRQRL++ EV+  YG S HIS   R+ +++PL DLFS++ ACL ADV+ Y+   DI ++  A+VEDV +AI +VHLSG MHKEV +D P Y+ P+P LR  L R RD GKK FLC+NS++ Y++ GL++++GDDW+E FDVVIVSA KP FYT  R FR +     +++W  V  L +G+VY+ GS+  L+KLTGW+G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ V ++ +Y+  A ++  + EL+R +Q +   +RSE                    P     A V   D L      LQTEM  + N NFGSVFRA+  P+ FAF ++RY D+Y ++LEN   Y   H FYP+R I+MPH+
Sbjct:   28 QSDVVFANNHLRLSGIDVVGFDYDYTLCHYSEELQHLIYAMARDYMVSKLRYPEGVSVLQ-YDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGGSRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDRDIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRMLDIGHKQVQWHAVRALHRGEVYTQGSVYQLSKLTGWVGSRVLYIGDNLFSDLVEPSRANGWRTGAIIRELEDEMHVHRTPEYQRLAFQISKIEELMRSIQNE---LRSE--------------------PIPQNHAFV---DQLINIHEALQTEMENLVNVNFGSVFRADTYPSQFAFLVQRYVDIYSARLENLLEYPSNHTFYPER-IAMPHE 469

[Close]

BLAST of NO13G01550 vs. NCBI_GenBank
Match: GAY05756.1 (5'-nucleotidase domain-containing protein, putative [Pythium insidiosum])

HSP 1 Score: 411.4 bits (1056), Expect = 5.200e-111
Identity = 226/548 (41.24%), Postives = 332/548 (60.58%), Query Frame = 0

Query:   59 SSIPSRGGFIWLSRS---LSSTAPTKHKKHTPQPLSSITHPHPRINRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQE-FFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHD 603
            SS+ +    +W  R+   L +TA      + P+  +SI    P + RL+ +Y   + +  P+  S              + +F NN + L  +DV+G+DYDYTL  YT++++ LIY MA+DYLI+   YP  M++  T+DP FAIRGL +D ++G L K+S   ++    V+ GR RL+++E++  Y  S HIS QYR+  ++PL DLFS++ ACL ADV+ YL    I ++  A+VEDV  AI  VH SG+MHK V KD P Y+ PSP L   L R R+ GKK+FLC+NS+++Y+  GLR++IGDDW+E  FDVV+VSA KP FYT +R FR +     +++W  V  L+   VY+ GSL  LT+LTGW G RVLYIGD +++DLV   R  GWRTGA+IREL+ E+ VQ+S +Y+  A ++  + EL+R +Q ++ + R++                  +  ++ Q  D+            LQ  M +M N NFGSVFRA+  P+ FAF ++RY D+Y ++LE+   Y   H FYP+R  S+PH+
Sbjct:   22 SSLAADVSLVWSGRTASLLPATASLSTLSYLPKLKASIPAELPTVRRLVEDYEDAVSKFRPSEPS------------NANEVFANNHLRLANIDVVGFDYDYTLCHYTEELQRLIYGMARDYLIKKYRYPGGMES-LTFDPTFAIRGLTIDKEKGLLCKISSHQKLCYTGVYRGRHRLSREEIMHLYEGSRHISIQYRDHKMEPLNDLFSVAHACLFADVVQYLIDAGIEYEPIAIVEDVHAAITQVHTSGHMHKAVAKDLPRYVEPSPMLLPFLERIRNSGKKMFLCTNSSFQYIDAGLRYMIGDDWREVLFDVVLVSARKPKFYTRNRSFRLLDPDQKQVQWQAVRELKPNHVYTQGSLLQLTRLTGWGGNRVLYIGDSLFSDLVEPSRINGWRTGAIIRELEDEIKVQRSPEYQHLAFQINLLEELMRRIQNEL-RTRNDHE----------------SPEFVWQLVDI---------HEQLQNRMEQMINANFGSVFRADNYPSQFAFFVQRYVDIYSARLEHLLEYPTTHTFYPERA-SLPHE 529

The following BLAST results are available for this feature:

BLAST of NO13G01550 vs. NCBI_GenBank

BLAST of NO13G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM21819.1	5.700e-243	79.58	5 -nucleotidase domain-containing [Nannochloropsis...	[more]
XP_005853545.1	2.500e-166	82.89	5 -nucleotidase domain-containing [Nannochloropsis...	[more]
ETI52062.1	5.000e-114	43.99	hypothetical protein F443_04713 [Phytophthora para...	[more]
POM80716.1	5.000e-114	43.42	5'-nucleotidase domain containing hypothetical pro...	[more]
ETP49773.1	6.500e-114	43.99	hypothetical protein F442_04768 [Phytophthora para...	[more]
XP_008902009.1	1.100e-113	43.99	hypothetical protein PPTG_08999 [Phytophthora para...	[more]
POM75945.1	1.500e-113	45.74	ABCA1 lipid exporter, partial [Phytophthora palmiv...	[more]
XP_008902010.1	3.200e-113	45.96	hypothetical protein, variant 1 [Phytophthora para...	[more]
ETP49775.1	4.200e-113	45.96	hypothetical protein, variant 2 [Phytophthora para...	[more]
GAY05756.1	5.200e-111	41.24	5'-nucleotidase domain-containing protein, putativ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL134	nonsL134	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL131	nonsL131	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR026	ncniR026	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR070	ngnoR070	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR069	ngnoR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001741	NSK001741	Nannochloropsis salina (N. salina CCMP1776)	gene
NSK001689	NSK001689	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO13G01550.1	NO13G01550.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|530904	gene_6853	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100431g2	gene8612	Nannochloropsis gaditana (N. gaditana B-31)	gene
Naga_100169g5	gene8565	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO13G01550.1	NO13G01550.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO13G01550 ID=NO13G01550|Name=NO13G01550|organism=Nannochloropsis oceanica|type=gene|length=1914bp
ATGGGACCAATGCTACGGCGTTTGGTAAGAAGGGCAGGCACGGCCTGGGG
TGCCGGAAATGGCAGCAGCAGCATCCGCAGCCCATTGTGCGGCGGCTATT
TGTCGCGACCCCTTCCGACTACCATGATCAGCAGCGCCCCCAGCACCAGC
ACCAACACAGGCATCAAAATTGGCAGCAGTATCCCCAGTCGTGGGGGATT
TATTTGGCTGTCGCGGTCTTTGTCGTCCACCGCACCCACAAAACACAAGA
AGCATACCCCTCAGCCCTTGAGCAGCATCACGCACCCACACCCGCGAATA
AATCGGCTGCTGCGCGAATATCTGGCCAAGATGGAAGAGGGGCCACCGAC
TTCTAATTCTCTCCAGCCGCCTGGCCAGGAGCAGCAAAAAATACCCCGGA
AGGACCGTATATTTGTCAACAACGCAATCAACTTGGGCAAGGTGGACGTC
TTAGGCTGGGATTACGATTACACGCTCGTGAGTTATACCGACAAGATGGA
AGGCCTTATATACAGCATGGCCAAGGATTATCTGATCGAGCACTCGGGCT
ACCCTACGGAGATGAAGACTCGTCGCACGTACGACCCGCACTTTGCTATT
CGCGGCCTTGCCGTGGACATGGATCGAGGGTGGCTGCTCAAGCTCAGTTA
TATCAACCAAATCGCGCTGCGGACTGTTTTCAATGGCCGACAGCGCTTGA
CAAAGCAAGAGGTGTTGGCTGAGTACGGGGACAGCTCTCACATCTCGCCA
CAGTACCGAAACGAGCACTTGAAGCCTCTTCTTGACTTGTTCTCCATGTC
GCTGGCCTGCCTGCTCGCCGATGTCCTCGACTATTTGAACAAATTAGACA
TCCACCACGACCGCCGCGCCGTCGTAGAAGACGTAATGAAAGCTATTAAC
CACGTGCACTTGAGCGGAAACATGCACAAGGAAGTGGTCAAGGACCCGCC
CACCTACATGATGCCCTCGCCCCACTTACGCGAGACCCTGACACGCTTCC
GCGACGTGGGCAAAAAGCTATTTCTGTGCTCCAACTCCAATTACGAATAT
GTGTCGGGGGGGCTTCGATTCCTGATTGGAGATGATTGGCAGGAGTTTTT
TGACGTGGTAATCGTGAGCGCGGACAAGCCGGGTTTCTATACCTCTGATC
GACCATTCCGTCAGGTGGCACAGAGCACGGGCAAGATTCGGTGGACGGAA
GTGACCACGCTGGAGAAAGGCAAGGTCTACTCACACGGCTCTTTGGATGG
CTTGACAAAGCTGACGGGGTGGATGGGCCCGCGAGTGCTGTATATTGGGG
ATCAGATTTGGGCGGACTTGGTGGGGGCTCGGCGGAACCAGGGGTGGCGC
ACAGGAGCGGTGATTCGGGAGTTGGACCATGAATTGCTTGTGCAGCAATC
GACAAAGTACCGGGCGCATGCCCATAAGGTGATAACTGTGACGGAGCTCT
TGCGCTTGGTGCAAGAAGATATGGAGAAGATTCGGAGTGAGGCAACAGCA
GCGGCGGCGAAAGCGAAAGTTGCAGAGGGTGGGAAGGTGGGAGGGGCGGC
GCCGTATTTGTTGCAAGAAGCGGATGTTATTGTCTCGGATGGGTTGGAAA
AGTATTTGAGGCATCTCCAGACAGAAATGTCCAAGATGTTCAATGGTAAT
TTCGGCTCTGTCTTTCGGGCAGAAGGAGAACCCACATTGTTTGCGTTTTC
GCTACGGCGGTACGCGGATCTGTATTTGAGTAAGCTCGAGAATTTTCGAT
TTTACTCGCCCATGCATCGTTTCTACCCTCAACGAGGGATTTCAATGCCG
CATGATCCGTACATTCCGGCAATCACCCGCCCGCCTCCCTCTGCGGTGGA
GGAGGAAGGGGGTGGAGGGCGAGAAGGAGTGGAAGAGTCGAAAGGTTCAG
AGGAGGGGAGGTAA

protein sequence of NO13G01550.1

>NO13G01550.1-protein ID=NO13G01550.1-protein|Name=NO13G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MGPMLRRLVRRAGTAWGAGNGSSSIRSPLCGGYLSRPLPTTMISSAPSTS
TNTGIKIGSSIPSRGGFIWLSRSLSSTAPTKHKKHTPQPLSSITHPHPRI
NRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDV
LGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAI
RGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISP
QYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAIN
HVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEY
VSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTE
VTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWR
TGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATA
AAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGN
FGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMP
HDPYIPAITRPPPSAVEEEGGGGREGVEESKGSEEGR*

Synonyms

Publications