NO13G01480, NO13G01480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 486.5 bits (1251), Expect = 7.400e-134 Identity = 220/285 (77.19%), Postives = 255/285 (89.47%), Query Frame = 0 Query: 5 SLPPWLWQDPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYARDPSCGVVRDMIPWCAGMYATYLY 290 +LP WLW+DP PLY +S+Y T DP +P RFVQVFQS+P LEP Y E+EK F+V S+++IRDN LPI+ATILYLSF+IEG+KY+ERR+ EGKGP+NLG FPAFWNAFLA+FS+LG RVVPH LF+FTHK+F+ TVCE PD AGYGDGAAGMWVMLFTVSK+FELVDT+ILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHA+MYSYYFL E++LWPKWFNPMWITMAQI QML GVGIT+++F ++RDPSC +VR +IPWCA MYATYLY Sbjct: 4 ALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLY 288
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 480.7 bits (1236), Expect = 4.000e-132 Identity = 219/287 (76.31%), Postives = 253/287 (88.15%), Query Frame = 0 Query: 13 DPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 DP PLY+TSQYITRDP+ P RFVQVFQ+IP LEP YTE+EK F+V +R IRD+ W+PI+A ILYLSF++EG+KY+ERRK EGKGPVNLG FPA WN FLA FSI G LRVVPH LF+FTHK+F+ TVCE PD AGYGDGAAG+WVMLFTVSKVFEL+DT+ILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPG+YF+AMNY+VHAVMYSYYFL E++LWPKW +P++IT+ QISQML GVG+T A++ Y DPSC VVRD+IPWCA MYATYLYFFV FF+ERF Sbjct: 6 DPAPLYETSQYITRDPVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERF 292
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 287.7 bits (735), Expect = 5.000e-74 Identity = 141/268 (52.61%), Postives = 190/268 (70.90%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYARDPS-CGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 F+Q +Q P EP YT EK+F+V+ Y + N WLP+++ ILY + ++ + K PV A+WN LA+FSILG LR+VPHLL+ T +F+ TVC PP+ GDGA+G+W +LFT+SK+ ELVDTM + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YF+AMNY+VHAVMYSYYFL IK PKW NP++IT QI QM+AGV IT+ F+YARDPS CGVV ++ + + +Y +YLY F+ F ++RF+ Sbjct: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVL------LLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMN-GDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFF 297
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_005852597.1 (fatty-acyl elongase [Nannochloropsis gaditana CCMP526] >EKU23234.1 fatty-acyl elongase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 271.2 bits (692), Expect = 4.900e-69 Identity = 122/171 (71.35%), Postives = 148/171 (86.55%), Query Frame = 0 Query: 5 SLPPWLWQDPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMI 176 +LP WLW+DP PLY +S+Y T DP +P RFVQVFQS+P LEP Y E+EK F+V S+++IRDN LPI+ATILYLSF+IEG+KY+ERR+ EGKGP+NLG FPAFWNAFLA+FS+LG RVVPH LF+FTHK+F+ TVCE PD AGYGDGAAG+WVMLFTVSK+FELVDT++ Sbjct: 4 ALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNQALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGLWVMLFTVSKLFELVDTVL 174
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 239.6 bits (610), Expect = 1.600e-59 Identity = 129/300 (43.00%), Postives = 181/300 (60.33%), Query Frame = 0 Query: 2 SAMSLPPWLWQDPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY-ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 +A+ W T T Y R+ F+Q +Q P LE Y FEK FN + + N W+ I+ +Y+ +++R L+ NL A WN FLA +S +G +RVVPHLL+ + F+ TVC P GDGA G+WV LFT+SKV EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YF+AMNY+VH+VMY+YYFL IK PKW NP++IT QI+QML GV I+ F Y + D SC V ++ A +YA+YLY F+ F ++RF+ Sbjct: 9 TAVCTSQWYCPPETLTATTRVYTARN--TTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYIN-GDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 238.8 bits (608), Expect = 2.700e-59 Identity = 121/267 (45.32%), Postives = 164/267 (61.42%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYAR-DPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 F Q+FQ IP +EP Y E+EKK++ Y ++ W+PI ILY+ + G+ ++ RK P +L A+WN L+ FSI+G +RVVPHL+++ K C P+ YG+ A G WV F +SK+ EL+DT +VL+ K FLHWYHHVTVLL+TWF Y+ NPGI FVAMNYSVHA+MY YYFL +++ P W P +IT+ QISQM+ GV + R C V +D++ C MY+TYLY F F + RF Sbjct: 41 FTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRK-----PFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRF 301
BLAST of NO13G01480 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 238.8 bits (608), Expect = 2.700e-59 Identity = 136/272 (50.00%), Postives = 166/272 (61.03%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTW--LPIIATILYLSFMIEGRKYVERR-KLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASF--LYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 F Q+FQ PVL P YTE+EK F+ SY NTW LP+ +Y ++ G K +E R K E K + A WN L+ FS G LR VPHLL T F+ T+C P YG+GA G+WVMLF SKV ELVDT+ +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHAVMY+YY+LT IK WP W P IT+AQISQM+ GVGI +ASF LY C V + A MY +YLY F FF+ RF Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTAL------ACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF 294
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 238.0 bits (606), Expect = 4.600e-59 Identity = 136/272 (50.00%), Postives = 166/272 (61.03%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTW--LPIIATILYLSFMIEGRKYVERR-KLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASF--LYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 F Q+FQ PVL P YTE+EK F+ SY NTW LP+ +Y ++ G K +E R K E K + A WN L+ FS G LR VPHLL T F+ T+C P YG+GA G+WVMLF SKV ELVDT+ +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHAVMY+YY+LT IK WP W P IT+AQISQM+ GVGI +ASF LY C V + A MY +YLY F FF+ RF Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTAL------ACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF 294
BLAST of NO13G01480 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 235.0 bits (598), Expect = 3.900e-58 Identity = 133/272 (48.90%), Postives = 165/272 (60.66%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTW--LPIIATILYLSFMIEGRK-YVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIAS--FLYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 F Q+FQ PVL+PLYT++EK F + +D TW LP+ +Y +I G K V R K E K + A WN L+ FS G +R VPHLL F+ T+C P YG+GA GMWVMLF SKV ELVDT+ +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHA+MY+YY+LT I WPKW P IT+AQISQM+ GVGI +S FLY C V R + A MY +YLY F FF+ RF Sbjct: 33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQD-TWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTAL------ACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHP-AETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 296
BLAST of NO13G01480 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.]) HSP 1 Score: 229.9 bits (585), Expect = 1.200e-56 Identity = 119/278 (42.81%), Postives = 166/278 (59.71%), Query Frame = 0 Query: 34 FVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFT---HKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY---------ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 F ++Q IP L P YT +EK F+ S+ + +TW+P++AT LY +F G K + RK +L WN L+ S G +RV HLL++ + +FR T+CE P+ A Y D A G+W ++FTVSK+ ELVDT+ +VL+ K +FLHWYHH TVLL +WF + P +YF+A+NYS+H VMY Y+FL IK P+WFNPMW+T+AQISQM G+ + + S Y C + MI MY+TYL FV FF++R+ Sbjct: 33 FHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRK-----AFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPE-ATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY 304 The following BLAST results are available for this feature:
BLAST of NO13G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01480 ID=NO13G01480|Name=NO13G01480|organism=Nannochloropsis oceanica|type=gene|length=1419bpback to top protein sequence of NO13G01480.1 >NO13G01480.1-protein ID=NO13G01480.1-protein|Name=NO13G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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