NO13G01340, NO13G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G01340 vs. NCBI_GenBank
Match: EWM21789.1 (hypothetical protein Naga_100065g20 [Nannochloropsis gaditana]) HSP 1 Score: 585.1 bits (1507), Expect = 1.600e-163 Identity = 296/354 (83.62%), Postives = 319/354 (90.11%), Query Frame = 0 Query: 45 PPAP--VSSPLPAPAL----PHANLKAVAILSAAVGSWAVLRAPEVRTWFQDVSPLHSKYFPLSRHQVLIFLAWLTNKIAVRVPGRSDGKSWKDAMASPVRFFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWVGRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISARVSAFLQAGLAGAVMLWKLLLRAGVVAPGDAVRLMTAAYEPVKSL 393 PPAP V +P PA L P+ANL+A+AILSAA GSWAVLRAP VR WF DV PL KYFPL+RHQVLI LAWLTNKIAVR+PGRSDGKSWKDAM+SPVRFFTPS YAFAIWAPIFLGE +LTFYQL S+RLAPAL PYLAR+APPLAQA AAQSLWC+AFRPWVGRMQFVP+ALLAMTAVGLSRVHT+LRE VAAGAMRPWDY+IVHLPLSLHFGWITCATLVNLNGWFAVAP+LRTGDKLGLALAS+NVAVTLG Q+TLASGDPVIALVVAWALYAVA DL PS+S+LRKN LV DDALDCLEISARVSAFLQAGLAGAVM+WK+LL+AGVV PGDA RLM A PVK+L Sbjct: 51 PPAPEVVETPSPAQPLSLASPYANLRALAILSAAAGSWAVLRAPNVREWFDDVRPLQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSAFLQAGLAGAVMVWKVLLKAGVVVPGDAKRLMAVAMGPVKTL 404
BLAST of NO13G01340 vs. NCBI_GenBank
Match: CBJ30996.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 174.5 bits (441), Expect = 6.600e-40 Identity = 116/284 (40.85%), Postives = 152/284 (53.52%), Query Frame = 0 Query: 45 PPAPVSSPLPAPALPHANLKAV--AILSAAVGSWAVLRAPEVRTWFQDVSPLHSKYFPLSRHQVLIFLAWLTNKIAVRVPGRSDG---KSWKDAMASPVRFFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWV--GRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADD 322 P PV + AL A + A S A+ SW++ P V+ W QVL +W N AV GR DG + KDA VR+F P+G+AF+IW PIFLGE L YQ A +L++++P L+ AF QS WCL+FR W + + P ALL TA L H ++R +AAG M Y +VHLP+SLHFGW++CATLVN N + ++ P G KL +LAS+ AV L +T +GDPV A VVAWAL AVA + Sbjct: 9 PEKPVQRAVSVTALAIAGCGGLYFAAESGALVSWSL---PYVKPW-----------------QVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYISLLPFSDKG-KLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASE 271
BLAST of NO13G01340 vs. NCBI_GenBank
Match: CBN78158.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.6 bits (436), Expect = 2.500e-39 Identity = 105/219 (47.95%), Postives = 128/219 (58.45%), Query Frame = 0 Query: 105 QVLIFLAWLTNKIAVRVPGRSDGKSWKDAMAS-PVRFFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHP--YLARIAPPLAQAFAAQSLWCLAFRPWV--GRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAV 319 QVL AW N A GR DG + + PVRF +P+G+AFAIW PIF GE + +QL P++ +L+ I+P A A Q+LWC +FRPW + ++P LL T V L VH ILRE M Y+ VH+PLSLH GWI+CATLVNLNG+FA L KLGLAL SV AV LG ITL DP+ A VVAWAL+AV Sbjct: 311 QVLAASAWALNMRATFGGGRLDGIGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQL---MPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAV 526
BLAST of NO13G01340 vs. NCBI_GenBank
Match: XP_005841561.1 (hypothetical protein GUITHDRAFT_100057 [Guillardia theta CCMP2712] >EKX54581.1 hypothetical protein GUITHDRAFT_100057 [Guillardia theta CCMP2712]) HSP 1 Score: 142.5 bits (358), Expect = 2.800e-30 Identity = 98/269 (36.43%), Postives = 140/269 (52.04%), Query Frame = 0 Query: 99 FPLSRHQVLIFLAWLTNKIAVRVPGRSDGKSWKDAMASPVRFFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWVGRMQFVPTALLAMTAVGLSRVHTILREGVA-AGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISARVSAFLQAGLAGAVMLWKL 367 F L Q++I + A +PGR D + + +RFFTP+G+AFAIWAPIFLGE+++ F L L +L +AP A A AQ+LWCLAFRPW + Q++P +LL + A+ L H + + +GA W +P++LHFGWIT A ++ NG A S ++ A S A G ++ GD A AWALYAV+ +LR G V + A+D L ++A +S+ A LA AV W + Sbjct: 27 FGLQSWQLMISGGYALFFCANLIPGRLDTVLGR-PKRTDLRFFTPAGFAFAIWAPIFLGEMLMMFSVLMPDSLRSPGSGWLEAMAPSYAAASVAQALWCLAFRPWALKYQWIPASLLTIAALALFESHRHVASSYSMSGAASLWSLFACRIPVALHFGWITAAAALSWNGQLASMGS-SIPIRITSATLSCYAAAAFLGVTSIVRGDGWPAATAAWALYAVS----KGHEVLR--GAVDNAAIDALNLAALLSS--SASLAMAVFTWAI 285
BLAST of NO13G01340 vs. NCBI_GenBank
Match: XP_001419294.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97587.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 137.9 bits (346), Expect = 6.800e-29 Identity = 97/224 (43.30%), Postives = 120/224 (53.57%), Query Frame = 0 Query: 141 FTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPW--VGRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISARVSAFLQAGLAGAVM 363 FTP+G+AFAIW I+ GE L + L S+ A +AP A A A Q+LWC AFRPW R +V +ALL AV L H LR A+ A + W Y H+PLS+HFGWI+CA LVNLN VA + +L A S A LG +TL +GDPV ALV+AWAL AVA D R + D L L +AR A +A LA V+ Sbjct: 36 FTPAGWAFAIWGAIYAGEFALVAHALASASGGGASEAATRAVAPSWALACAFQALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSAHRALR-AAASAASKAW-YWTTHVPLSMHFGWISCAALVNLNS--HVAKTCAPDTQLATAFLSAFGAGGLGAAVTLTTGDPVYALVIAWALTAVASD-----GGKRTTETLADVPLKALTKAARWGA--RAALASVVV 248
BLAST of NO13G01340 vs. NCBI_GenBank
Match: OUS46849.1 (hypothetical protein BE221DRAFT_145303 [Ostreococcus tauri]) HSP 1 Score: 131.7 bits (330), Expect = 4.900e-27 Identity = 104/290 (35.86%), Postives = 146/290 (50.34%), Query Frame = 0 Query: 82 PEVRTWFQDVSPLHSKYFPLSR-HQVLIFLAWLTNKIAVRVPGRSDGKSWKDA----MASPVR-------------FFTPSGYAFAIWAPIFLGELMLTFYQL--GSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWVGRMQ--FVPTALLAMTAVGLSRVHTILREGVAAGAMRPWD--YVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISA 348 P +++ F +++ L +K ++ +V++ LA+ N +V PGR DG+ K A A P FTP+G+AFAIW I+ GE+ +T + L G R+A A AP A A QSLWC+AFRPW + + +V +ALL A L LR AG++ P + + +PLSLHFGWI+CA LVN+N A ++ T ++ A S A LG +++ SGD V VVAWAL AVA D R V D LD L +A Sbjct: 319 PSLKSIFAEITSLTAKAIAGAQPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDERVAAA--------APYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALR---GAGSISPSEALFWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASD-----GGKRTTETVRDHTLDALRTAA 590
BLAST of NO13G01340 vs. NCBI_GenBank
Match: XP_009040722.1 (hypothetical protein AURANDRAFT_67092 [Aureococcus anophagefferens] >EGB04616.1 hypothetical protein AURANDRAFT_67092 [Aureococcus anophagefferens]) HSP 1 Score: 131.0 bits (328), Expect = 8.400e-27 Identity = 110/303 (36.30%), Postives = 150/303 (49.50%), Query Frame = 0 Query: 56 PALPHANLKAVAILSAAVGSWAVLRAPEVRTWFQDVSPLHSKYFPLSRHQVLIFLAWLTNKIAVRVPGRSDGKSWKDAMASPVRFFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWV---GRMQFVPTALLAMTAVGLSRVHTILR--EGVAAGAMRPW-DYVIVHLPLSLHFGWITCATLVNLNGWFAV-APSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISARVSA 352 PA P + K VA +AA + +RA R + +P Q + W N +AV VPGR DG A+ P+G+AFAIW PIFLGE +T + ++ + A IA P Q WC FRP V G + ++P+A LA TA L + H L+ + AAG +R + ++V PLSLHF W+TCATLVN+N + A+ LR K AL SV VA + +GDP+ VVAWAL AVA D + R GLV D +D + +A+ +A Sbjct: 102 PAQPPLSPKVVAAYAAAGLATTAVRAAVAR---RGPAP----------WQAAVAACWTLNNVAVMVPGRYDGGGDGAPTAATANLLAPAGWAFAIWGPIFLGE-CVTMLLVTAADPGHPVFDVGAAIAAPWCAGTLCQVAWCGLFRPSVCGPGAL-WIPSAALAATAFFLGKAHAALQGLDLYAAGPLRGLRNDLLVRWPLSLHFAWVTCATLVNINKYLALRGADLRV--KEAGALGSVAVAAAAAAYVLRTTGDPLYGFVVAWALAAVAAD--GGRQAAR--GLVPDAPIDRVVGAAKAAA 383
BLAST of NO13G01340 vs. NCBI_GenBank
Match: XP_022840923.1 (unnamed product [Ostreococcus tauri] >CEG01381.1 unnamed product [Ostreococcus tauri]) HSP 1 Score: 127.5 bits (319), Expect = 9.300e-26 Identity = 100/266 (37.59%), Postives = 133/266 (50.00%), Query Frame = 0 Query: 105 QVLIFLAWLTNKIAVRVPGRSDGKSWKDA----MASPVR-------------FFTPSGYAFAIWAPIFLGELMLTFYQL--GSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWVGRMQ--FVPTALLAMTAVGLSRVHTILREGVAAGAMRPWD--YVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDLLPSKSILRKNGLVGDDALDCLEISA 348 +V++ LA+ N +V PGR DG+ K A A P FTP+G+AFAIW I+ GE+ +T + L G R+A A AP A A QSLWC+AFRPW + + +V +ALL A L LR AG++ P + + +PLSLHFGWI+CA LVN+N A ++ T ++ A S A LG +++ SGD V VVAWAL AVA D R V D LD L +A Sbjct: 46 KVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGGDERVAAA--------APYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALR---GAGSISPSEALFWTTRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASD-----GGKRTTETVRDHTLDALRTAA 293
BLAST of NO13G01340 vs. NCBI_GenBank
Match: XP_002177221.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51684.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 121.7 bits (304), Expect = 5.100e-24 Identity = 96/280 (34.29%), Postives = 133/280 (47.50%), Query Frame = 0 Query: 91 VSPLHSKYFPLSRHQVLIFLAWLTNKIAVRVPGRSDGK---SWKDAMASPVR----------------------------FFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRPWV--GRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDL--LPSKSILRKNGLV 336 + L + F L Q+L A+ TN AV VPGR DG+ + + +P +P+G+AFAIW PI+LGE + LG + P L L +I+ P A QSLWC +FRP G ++V A+L TAV LS+VH + G+A +PL++HFGW T ATLVNLNG A++ T + AS A LG +TL G PV L +AWAL A A+ + +K+ L+K +V Sbjct: 23 IPSLQAVGFSLGSLQLLNAAAFATNVAAVSVPGRIDGQQDAEMRKEVLNPAEPGSGNTSSKDNESCSTFSDVYSASRGRTLVSPAGWAFAIWGPIYLGE---AAFCLGQFSVQP-LQTVLPQISAPFIAANLCQSLWCASFRPSYNKGWAKYVSAAMLGGTAVALSQVHAAVPPGLAG----------YFVPLTMHFGWATAATLVNLNGCVAMSDVSDT-FVIATGHASALAATALGVGVTLTQGSPVYGLTIAWALAACANGMKQRETKTPLQKGMMV 287
BLAST of NO13G01340 vs. NCBI_GenBank
Match: GAX22025.1 (hypothetical protein FisN_6Hh272 [Fistulifera solaris]) HSP 1 Score: 119.4 bits (298), Expect = 2.500e-23 Identity = 94/264 (35.61%), Postives = 128/264 (48.48%), Query Frame = 0 Query: 111 AWLTNKIAVRVPGRSDGKSWKDA-------------------MASPVR---FFTPSGYAFAIWAPIFLGELMLTFYQLGSSRLAPALHPYLARIAPPLAQAFAAQSLWCLAFRP-WVGRMQFVPTALLAMTAVGLSRVHTILREGVAAGAMRPWDYVIVHLPLSLHFGWITCATLVNLNGWFAVAPSLRTGDKLGLALASVNVAVTLGGQITLASGDPVIALVVAWALYAVADDL----LPSKSILRKNGLVGDDALDCLEISA 348 A+ N +AV +PGR DG ++ + SP R PSG+AFAIW PI+ GE + T Q L YL I+ P A QSLWC +FRP + G ++ A+L TA LS+VH VA A P + + LPLS+HFGW T ATLVNL+G A++P + +S +A LG +TL+ PV L +AWAL A AD + P+ +++K L AL C +A Sbjct: 46 AFGANCLAVSIPGRIDGTQDQEMRPGLLRADDDPYEPPDYTNVYSPSRGRTLVAPSGWAFAIWGPIYAGEAIFTVAQFFPQ---SGLALYLPAISAPFIAANLFQSLWCASFRPQYQGWASYISVAMLGGTAYSLSQVH-----AVACTATGPAYWFL--LPLSIHFGWTTAATLVNLSGSVAMSPENSDEFVTAIGHSSAVLATALGVGLTLSHAAPVYGLTLAWALSACADGMKTRDAPAAKVMQK--LCWTGALACATAAA 297 The following BLAST results are available for this feature:
BLAST of NO13G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01340 ID=NO13G01340|Name=NO13G01340|organism=Nannochloropsis oceanica|type=gene|length=1316bpback to top protein sequence of NO13G01340.1 >NO13G01340.1-protein ID=NO13G01340.1-protein|Name=NO13G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bpback to top Synonyms
Publications
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