NO13G01320, NO13G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01320 vs. NCBI_GenBank
Match: EWM21786.1 (ubiquitin carboxyl-terminal hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 766.1 bits (1977), Expect = 1.400e-217 Identity = 505/1175 (42.98%), Postives = 595/1175 (50.64%), Query Frame = 0 Query: 12 IETTAAARSP-----PPGTTVRPSSR--SGSNDASLGSSLRLPTGVIHSVLSHLEARDLSTSAQVCCELYECCDHPALWEAAGQVTYPHAEKLGALQLYNGEWKTLLRDQNRRDRSTLFEWEVTDCLTNTARRFSPTFLLGDYTFQLIVDPNGNPYVPLAKPGVSVYLTCCPTQYVRGLSPSGRLCMDPMADYLPNIHSANGLPPIDTWECCVAFALAVVNQTGARQ---------------------------------HANGYLSEKGSIKVQAHLRLACLSLKLFTSDAMKGYRGFGLAEFSNAALTARGGKVRSCLSXXXXXXXXXPAEQPQVAFTAAVD--IEGLGDGEGGLGGVIMEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLNPLPLXXXXXXXXXXXXNPSSSPASWTCAPTTAVAPPTKDTDSSNPSLSSSLAPTHPPPFRVYEVFQCMTVAAFRRLLARDLLPPSLTFSSSSSLRLWTVTQPWADLPAAPRELVRSLPPSDHPSLPEDLDWAEASIETLEEHQTLAMALDAHVDSVGEARVWVEIAGDGGLKSATGG------------GKARAGLVRVGKEEALEVTPPGLRMLPDPLEPAGHTEWRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFWAHALLPITTPIKFLLDYMSKEALPEEEGGREG-----------------------GGKGLRIVVETPPTNWQ-------------SPALSDGEGNGG---RGVERVGGGST----AALDRQDCQKHEEYER----GGSHFRCLDYHPTKTLKDLRLENGQILCFFLVGQEGEVQRAYQNLAHALLTEAASVVDWTGPTAKVEERRCPLSIMLQQ---------PRPSSL---PVSLSADASLCVRPRGSRLRPRLLLDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSLGRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLPVETHRYRFQGRAWAKEEYQGHREGHAMVCLQPIPATVAMLKSFRVREEEE 1074 + T AA P P + P+ R G A S RLPT VIH VLS L R+L AQVCCELYECCD+P LWE AG+ YPHAEKLG LY+GEWKTLLRD+NRRDRS LFEWEVTDCL NT RRFSPTF LG Y+FQLIVDP+GNPYVPLAKPGVSVYLTC PTQY+RGL+PSGR+C+DP AD +P ++ A+ D WEC VAF LA+VNQTGAR+ ANGYLSE GSIKV+A LRLACLSLK+FTSD M+ Y GFGLA A G RS L + AF + D L L V+ XXXXXXXXXXXXXX P+ SS P S C TA P S+ PS S P PF YEVFQCMTVAAFR +LA+D L SS + LRLW VTQPWAD PAAPREL+R++P DHP+LP+D ++ E + LEEHQTLAMAL AH+D + E RVW E+AGDGGL A GG GKA LV V +E L+++P LRMLPDP +P + + E +EF +HALLPI TP+ L +M+ E LP G+ G LR +VETPP NWQ S SD + NG G R GG L D + E+ R FRCL+YHPTKT+ DLRLENG IL FF GQE +Q Y ++A LL AA++ DWTGP+AKVEE CP+++ L Q PR SSL P +++C+RPRGSRLRPRL L+TV DLFEK+G QRFRVRNTFFE HT AR+TL+Y GRHLGFCCDRCG LDF GPR+KCC CQD+DLC C LPVE HRYRF+GR+WA+EE+ GH + HAMVCLQPIP+T+AML+ F V++ E Sbjct: 1 MRTAGAAGDPVIEPSSPSHCLLPTHRHERGDTAAPFDPSFRLPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSPTQYMRGLAPSGRMCVDPAADEMPYLNPADSRAE-DVWECAVAFTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPAFSRGGTRSFLQPPPRPRHLASTD----AFPPSPDTYTTSLLTTTTALDPVLAVPPLPSYAVLLPEADGMEEXXXXXXXXXXXXXXWGMETGEPVN-------------SSPPFSPEC---TADRP-----RSNRPSPSCHPFPASTTPFWGYEVFQCMTVAAFRAILAKD-----LNLSSPNHLRLWIVTQPWADSPAAPRELIRTVPLPDHPALPDDFNYEELPLSVLEEHQTLAMALGAHMDCLDEVRVWAEVAGDGGLTVAEGGKEGGREKGKGPSGKALKTLVPVSREAELDISPQTLRMLPDPTDPVQYMDAVE-------------------DRGDGGFGRGGDGAVEEQGIPESEPDQGVLGMSSASAAQARQMPTRGGATGEKEFEGDARDDPGVPCDTTESGQDVATAPALDSSSLSPLSEGDSQIAAGSMAPPESPTFILLFFKRLVPAFPVGPGKLGSSAIPATGASLEFSSHALLPIDTPVHALFTFMASEMLPRGGMGKSGQTNAERNMLATADPGIAPMVSGSSAAMLRCLVETPPNNWQPASAGSERAKGRISSLWSDRKENGSFIYMGDNRYGGKDKDSLHVELGEADSPRGEQLGREEGARSVRFRCLNYHPTKTISDLRLENGHILSFFQAGQEDLIQHVYCSMAQNLLRTAAAIYDWTGPSAKVEETPCPINVTLHQRHDYVPGNFPRVSSLSTAPWLAPWPSAMCLRPRGSRLRPRLTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGYGRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLPVEGHRYRFKGRSWAREEFSGHTDAHAMVCLQPIPSTLAMLRRFSVKKSAE 1125
BLAST of NO13G01320 vs. NCBI_GenBank
Match: XP_005856087.1 (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >EKU20273.1 ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 422.2 bits (1084), Expect = 5.000e-114 Identity = 272/531 (51.22%), Postives = 310/531 (58.38%), Query Frame = 0 Query: 23 PGTTVRPSSR--SGSNDASLGSSLRLPTGVIHSVLSHLEARDLSTSAQVCCELYECCDHPALWEAAGQVTYPHAEKLGALQLYNGEWKTLLRDQNRRDRSTLFEWEVTDCLTNTARRFSPTFLLGDYTFQLIVDPNGNPYVPLAKPGVSVYLTCCPTQYVRGLSPSGRLCMDPMADYLPNIHSANGLPPIDTWECCVAFALAVVNQTGARQ---------------------------------HANGYLSEKGSIKVQAHLRLACLSLKLFTSDAMKGYRGFGLAEFSNAALTARGGKVRSCLSXXXXXXXXXPAEQPQVAFTAAVD--IEGLGDGEGGLGGVIMEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLNPLPLXXXXXXXXXXXXNPSSSPASWTCAPTTAVAPPTKDTDSSNPSLSSSLAPTHPPPFRVYEVFQCMTVAAFRRLLARDLLPPSLTFSSSSSLRLWTVTQPWADLPAAPRELVRSLPPSDHPSLPEDLDWAEASIETLEEHQTLAM 517 P + P+ R G A S RLPT VIH VLS L R+L AQVCCELYECCD+P LWE AG+ YPHAEKLG LY+GEWKTLLRD+NRRDRS LFEWEVTDCL NT RRFSPTF LG Y+FQLIVDP+GNPYVPLAKPGVSVYLTC PTQY+RGL+PSGR+C+DP AD +P ++ A+ D WEC VAF LA+VNQTGAR+ ANGYLSE GSIKV+A LRLACLSLK+FTSD M+ Y GFGLA A G RS L + AF + D L L V+ XXXXXXXXXXXXXX P+ SS P S C TA P S+ PS S P PF YEVFQCMTVAAFR +LA+D L SS + LRLW VTQPWAD PAAPREL+R++P DHP+LP+D ++ E + LEEHQTLAM Sbjct: 10 PSHCLLPTHRHERGDTAAPFDPSFRLPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSPTQYMRGLAPSGRMCVDPAADEMPYLNPADSRAE-DVWECAVAFTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPAFSRGGTRSFLQPPPRPRHLASTD----AFPPSPDTYTTSLLTTTTALDPVLAVPPLPSYAVLLPEADGMEEXXXXXXXXXXXXXXWGMETGEPVN-------------SSPPFSPEC---TADRP-----RSNRPSPSCHPFPASTTPFWGYEVFQCMTVAAFRAILAKD-----LNLSSPNHLRLWIVTQPWADSPAAPRELIRTVPLPDHPALPDDFNYEELPLSVLEEHQTLAM 509
BLAST of NO13G01320 vs. NCBI_GenBank
Match: XP_005856088.1 (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >EKU20274.1 ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 354.0 bits (907), Expect = 1.700e-93 Identity = 191/387 (49.35%), Postives = 234/387 (60.47%), Query Frame = 0 Query: 746 IEFWAHALLPITTPIKFLLDYMSKEALPEEEGGREG-----------------------GGKGLRIVVETPPTNWQ-------------SPALSDGEGNGG---RGVERVGGGST----AALDRQDCQKHEEYER----GGSHFRCLDYHPTKTLKDLRLENGQILCFFLVGQEGEVQRAYQNLAHALLTEAASVVDWTGPTAKVEERRCPLSIMLQQ---------PRPSSL---PVSLSADASLCVRPRGSRLRPRLLLDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSLGRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLPVETHRYRFQGRAWAKEEYQGHREGHAMVCLQPIPATVAMLKSFRVREEEE 1074 +EF +HALLPI TP+ L +M++E LP G+ G LR +VETPP NWQ S SD + NG G R GG L D + E+ R FRCL+YHPTKT+ DLRLENG IL FF GQE +Q Y ++A LL AA++ DWTGP+AKVEE CP+++ L Q PR SSL P +++C+RPRGSRLRPRL L+TV DLFEK+G QRFRVRNTFFE HT AR+TL+Y GRHLGFCCDRCG LDF GPR+KCC CQD+DLC C LPVE HRYRF+GR+WA+E++ GH + HAMVCLQPIP+T+AML+ F V++ E Sbjct: 194 LEFSSHALLPIDTPVHALFTFMAREMLPRGGMGKSGQTNAERNMLATADPGIAPMVSGSSAAMLRCLVETPPNNWQPASAGSERAKGRISSLWSDRKENGSFIYMGDNRYGGKDKDSLHVELGEADSPRGEQLGREEGARSVRFRCLNYHPTKTISDLRLENGHILSFFQAGQEDLIQHVYCSMAQNLLRTAAAIYDWTGPSAKVEETPCPINVTLHQRHDYVPGNFPRVSSLSTAPWLAPWPSAMCLRPRGSRLRPRLTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGYGRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLPVEGHRYRFKGRSWAREDFSGHTDAHAMVCLQPIPSTLAMLRRFSVKKSAE 580
BLAST of NO13G01320 vs. NCBI_GenBank
Match: EWM24043.1 (potassium channel modulatory factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 199.1 bits (505), Expect = 6.900e-47 Identity = 262/1148 (22.82%), Postives = 377/1148 (32.84%), Query Frame = 0 Query: 46 LPTGVIHSVLSHLEARDLSTSAQVCCELYECCDHPALWEAAGQVTYPHAEKLGALQLYNGEWKTLLRDQNRRDRSTLFEWEVTDCLTNTARRFSPTFLLGDYTFQLIVDPNGNPYVPLAKPGVSVYLTCCPTQYVRGLSPSGRLCMDPMADYLPNIHSANGLPPIDTWECCV---AFALAVVNQTGARQHANGYLSEKGSIKVQAHLRLACLSLKLFTSDAMKGY-RGFGLAE----------FSNAALTARGGKVRSCLSXXXXXXXXXPAEQPQVAFTAAVDIEGLGDGEGGLGGVIMEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLNPLPLXXXXXXXXXXXXNPSSSPA--SWTCAPTTAVAPPTKDTDSSNPSLSSSLAPTHPPPFRVYEVFQCMTVAAFRRLLARDLLPPSLTFSSSSSLRLWTVTQPWADLPAAPRELV------------------RSLPPSDHPSLPEDLDWAEASIETLEEHQ----------------------------TLAMALDAHVDSVGEARVWVEIAGDGGLKSATGGGKARAGLVRVGKEEALEVTPPGLRMLPDPLEPAGHTEWRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFWAHALLPITTPIK--FLLDYMSKEALPEEEGGREGGGKGLRIVVETPPTNWQSPALSDGEGNGGRGVERVGGGSTAALDRQDCQKHEEYERGGSHFRCLDYHPTKTLKDLRLENGQILCFFLVGQEGEVQRAYQNLAHALLTEAASV------------------------------------------------VDWTGPT------------AKVEERRCPLSIMLQQPRPSSLPVSLSADASLCVRPRGSRLRPR---LLLDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLP-VETHRYRFQGRAWAKE-EYQGHREGHAMVCLQPIPATVAML 1064 LP ++ LS L+ L T A VC + + DH + WE A +PH ++ + YNG+WK L +D+NRR+RS +FEW VTD L+N RR+SP+F + DYTF++IVDP GNP V +PGVSVYL C SP+ L GLP E V F+ AV A + H+ A ++ A+ GY G G+ FS A + K R+ + + + + L D G D L + + A + T A AP D + YE+F C T+ AF+ +LARDL P S RLW TQPW D PRE++ + PP P L+ A++ T +H TL L H+D +G ARVW E A DGG S A + + +EE P L +L + G + I + +HA++ T ++ F+L PE G +ET P WQ G+G+ R+ A + + + R + TL+D+ +ENGQIL F++ G E V+ Y+ L EA + + TGP+ A E+R + P +L + + VRPR R P+ L L+ V +LFE+ G Q FRVRN +++H H NAR+T++Y + GRHLGFCCDRCG DF GPR+KCC+C DYDLC +C++ P HRY+++ R W +E ++ H + H M + P+P + L Sbjct: 4 LPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLAC---------SPAAPLXXXXXXXXXXXXXXXAGLPIPPVAEALVQNPGFSEAV-----AAXXXXXXXGMPTGLNPNHHMEAAAMA-------ALSGYGHGGGIGSPPGDWECCCAFSLTACNQQ-RKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGF-------------------------------------VVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLT------------------YELFHCTTLTAFKEMLARDLGMP-----SPEHFRLWVFTQPWPDTILCPREILTNAGGXXXXXXXXXXXXXXTAPPVAQNQNPHQLN-PNAAV-TPPQHTPLXXXXXXXXXXXXXXXXXXXXEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEER---DAPELSVLMATSQDEGQGSQPD-----------------------------------------------------------------------KGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAH----------METTPATWQ---------RCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQA-------TLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPR--RASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 965
BLAST of NO13G01320 vs. NCBI_GenBank
Match: XP_005854280.1 (potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526] >EKU22085.1 potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 169.9 bits (429), Expect = 4.500e-38 Identity = 245/1091 (22.46%), Postives = 350/1091 (32.08%), Query Frame = 0 Query: 103 YNGEWKTLLRDQNRRDRSTLFEWEVTDCLTNTARRFSPTFLLGDYTFQLIVDPNGNPYVPLAKPGVSVYLTCCPTQYVRGLSPSGRLCMDPMADYLPNIHSANGLPPIDTWECCV---AFALAVVNQTGARQHANGYLSEKGSIKVQAHLRLACLSLKLFTSDAMKGY-RGFGLAE----------FSNAALTARGGKVRSCLSXXXXXXXXXPAEQPQVAFTAAVDIEGLGDGEGGLGGVIMEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLNPLPLXXXXXXXXXXXXNPSSSPA--SWTCAPTTAVAPPTKDTDSSNPSLSSSLAPTHPPPFRVYEVFQCMTVAAFRRLLARDLLPPSLTFSSSSSLRLWTVTQPWADLPAAPRELV------------------RSLPPSDHPSLPEDLDWAEASIETLEEHQ----------------------------TLAMALDAHVDSVGEARVWVEIAGDGGLKSATGGGKARAGLVRVGKEEALEVTPPGLRMLPDPLEPAGHTEWRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFWAHALLPITTPIK--FLLDYMSKEALPEEEGGREGGGKGLRIVVETPPTNWQSPALSDGEGNGGRGVERVGGGSTAALDRQDCQKHEEYERGGSHFRCLDYHPTKTLKDLRLENGQILCFFLVGQEGEVQRAYQNLAHALLTEAASV------------------------------------------------VDWTGPT------------AKVEERRCPLSIMLQQPRPSSLPVSLSADASLCVRPRGSRLRPR---LLLDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLP-VETHRYRFQGRAWAKE-EYQGHREGHAMVCLQPIPATVAML 1064 YNG+WK L +D+NRR+RS +FEW VTD L+N RR+SP+F + DYTF++IVDP GNP V +PGVSVYL C SP+ L GLP E V F+ AV A + H+ A ++ A+ GY G G+ FS A + K R+ + + + + L D G D L + + A + T A AP D + YE+F C T+ AF+ +LARDL P S RLW TQPW D PRE++ + PP P L+ A++ T +H TL L H+D +G ARVW E A DGG S A + + +EE P L +L + G + I + +HA++ T ++ F+L PE G +ET P WQ G+G+ R+ A + + + R + TL+D+ +ENGQIL F++ G E V+ Y+ L EA + + TGP+ A E+R + P +L + + VRPR R P+ L L+ V +LFE+ G Q FRVRN +++H H NAR+T++Y + GRHLGFCCDRCG DF GPR+KCC+C DYDLC +C++ P HRY+++ R W +E ++ H + H M + P+P + L Sbjct: 3 YNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLAC---------SPAAPLXXXXXXXXXXXXXXXAGLPIPPVAEALVQNPGFSEAV-----AAXXXXXXXGMPTGLNPNHHMEAAAMA-------ALSGYGHGGGIGSPPGDWECCCAFSLTACNQQ-RKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGF-------------------------------------VVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLT------------------YELFHCTTLTAFKEMLARDLGMP-----SPEHFRLWVFTQPWPDTILCPREILTNAGGXXXXXXXXXXXXXXTAPPVAQNQNPHQLN-PNAAV-TPPQHTPLXXXXXXXXXXXXXXXXXXXXEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEER---DAPELSVLMATSQDEGQGSQPD-----------------------------------------------------------------------KGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPDMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAH----------METTPATWQ---------RCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQA-------TLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPR--RASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 907
BLAST of NO13G01320 vs. NCBI_GenBank
Match: CBJ29000.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.0 bits (271), Expect = 9.400e-20 Identity = 66/211 (31.28%), Postives = 90/211 (42.65%), Query Frame = 0 Query: 852 TLKDLRLENGQILCFFLVGQEGEVQRAYQNLAHALLTEAASVVDWTGPTAKVEERRCPLSIMLQQPRPSSLPVSLSADASLCVRPRGSRLRPRLLLDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEY-SLGRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQAC--RQLPVETHRYRFQGRAWAKEE-YQGHREGHAMVCLQPIPA 1059 TL+ L +G +CFF G V+R Y L+ E ++ GP +V + + V ++ E LG Q FR R + + H N RETLEY + GR L F CD CG DF GPR+ C C DYDLC C ++ P HRY F W +E +QGH + H + + +PA Sbjct: 842 TLERAGLSSGTSICFFRAGDRPAVRRTYNAAVEGLVEEMNMLLRGEGPLGRVH---------------------------------------LIKMAEVVEICESLGYQGFRTRIAYDQQRHVNPRETLEYIAQGRQLAFICDSCGTQDFTGPRYHCLACPDYDLCHQCNAKKEPAPRHRYLFANGHWKREAGFQGHTDDHELEEIFTVPA 1013
BLAST of NO13G01320 vs. NCBI_GenBank
Match: GAX99310.1 (ubiquitin carboxyl-terminal hydrolase and/or F-box protein, putative [Pythium insidiosum]) HSP 1 Score: 95.5 bits (236), Expect = 1.100e-15 Identity = 54/120 (45.00%), Postives = 67/120 (55.83%), Query Frame = 0 Query: 950 VADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACR-QLPVETHRYRFQGRAWAK-EEYQGHREGHAMVCLQPI---PATVAML 1064 + + E+L +FRVR+ F + R+TL Y + GRHLGF CD CG DFKGPRF C IC DYDLCQ+C Q THRY W + +Q H+ H M L P+ P TV L Sbjct: 364 IESMAERLDIPKFRVRSA-FRKCREDGRQTLRYIMEGRHLGFICDCCGETDFKGPRFNCTICNDYDLCQSCHDQSHQVTHRYANVDGKWQRIYNFQDHKSTHLMKRLLPVFYKPPTVQPL 482
BLAST of NO13G01320 vs. NCBI_GenBank
Match: POM65926.1 (Ubiquitin carboxyl-terminal hydrolase and/or F-box protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 89.0 bits (219), Expect = 1.000e-13 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0 Query: 947 LDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLPVE-THRYRFQGRAWAK-EEYQGHREGHAMVCLQPI 1057 L+ V +L EKL +FRVR+ F H +A TL Y + GRHLGF CD CG DF G RF C +C DYDLC AC E +HRY W + ++ H+ H M + P+ Sbjct: 586 LEHVENLAEKLDIPKFRVRSA-FRKCHEDALATLRYIMDGRHLGFICDSCGETDFTGARFNCVVCNDYDLCAACNAQSCEISHRYANVDGKWQRVYNFKDHKILHTMRKMLPV 697
BLAST of NO13G01320 vs. NCBI_GenBank
Match: ETI43539.1 (hypothetical protein F443_11552 [Phytophthora parasitica P1569] >ETK83573.1 hypothetical protein L915_11238 [Phytophthora parasitica] >ETL90157.1 hypothetical protein L917_11039 [Phytophthora parasitica] >ETM43452.1 hypothetical protein L914_11072 [Phytophthora parasitica] >ETO72166.1 hypothetical protein F444_11622 [Phytophthora parasitica P1976] >ETP13314.1 hypothetical protein F441_11465 [Phytophthora parasitica CJ01A1] >ETP41383.1 hypothetical protein F442_11447 [Phytophthora parasitica P10297]) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-13 Identity = 48/113 (42.48%), Postives = 61/113 (53.98%), Query Frame = 0 Query: 947 LDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLPVE-THRYRFQGRAWAK-EEYQGHREGHAMVCLQPI 1057 L+ V L EKL +FRVR+ F H +A TL Y + GRHLGF CD CG DF G RF C +C DYDLC +C E +HRY W + ++ H H M + P+ Sbjct: 597 LEQVEKLAEKLDIPKFRVRSA-FRRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPV 708
BLAST of NO13G01320 vs. NCBI_GenBank
Match: ETI43541.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK83575.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL90159.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM43454.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO72168.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP13316.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP41385.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-13 Identity = 48/113 (42.48%), Postives = 61/113 (53.98%), Query Frame = 0 Query: 947 LDTVADLFEKLGTQRFRVRNTFFEHAHTNARETLEYSL-GRHLGFCCDRCGCLDFKGPRFKCCICQDYDLCQACRQLPVE-THRYRFQGRAWAK-EEYQGHREGHAMVCLQPI 1057 L+ V L EKL +FRVR+ F H +A TL Y + GRHLGF CD CG DF G RF C +C DYDLC +C E +HRY W + ++ H H M + P+ Sbjct: 576 LEQVEKLAEKLDIPKFRVRSA-FRRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPV 687 The following BLAST results are available for this feature:
BLAST of NO13G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01320 ID=NO13G01320|Name=NO13G01320|organism=Nannochloropsis oceanica|type=gene|length=3369bpback to top protein sequence of NO13G01320.1 >NO13G01320.1-protein ID=NO13G01320.1-protein|Name=NO13G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bpback to top Synonyms
Publications
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