NO13G01290, NO13G01290 (gene) Nannochloropsis oceanica

Overview
NameNO13G01290
Unique NameNO13G01290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1306
Alignment locationchr13:389740..391045 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoglucomutase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:389740..391045 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0071704organic substance metabolic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016868intramolecular transferase activity, phosphotransferases
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016055A-D-PHexomutase_a/b/a-I/II/III
IPR036900A-D-PHexomutase_C_sf
IPR005843A-D-PHexomutase_C
IPR005846A-D-PHexomutase_a/b/a-III
Homology
BLAST of NO13G01290 vs. NCBI_GenBank
Match: EWM21792.1 (phosphoglucomutase [Nannochloropsis gaditana])

HSP 1 Score: 556.6 bits (1433), Expect = 4.800e-155
Identity = 270/309 (87.38%), Postives = 291/309 (94.17%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MGVD+KGN V AKEGV+IP+FGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGL+GVARSMPTSGAVDLVAKR+N+SLFETPTGWKFFGNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAW+SILAHYN++  + LVSVESIVREHW TYGRNYYVRYDYEGVDK+RAEAMV  MTSSFAAVTG+ L GGY VAVADEF+Y DPVDGSVSSHQG+RYLFTDGSRVIFRLSGTAGSGATVRMYLEKY+ D++ LG HPLEALG LV VAL+LS+L++FTGR EPTVIT
Sbjct:  761 MGVDSKGNAVAAKEGVLIPSFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLRGVARSMPTSGAVDLVAKRMNMSLFETPTGWKFFGNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAWLSILAHYNQDPKKALVSVESIVREHWRTYGRNYYVRYDYEGVDKSRAEAMVGHMTSSFAAVTGQCLAGGYTVAVADEFQYVDPVDGSVSSHQGVRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYEADRSKLGSHPLEALGVLVQVALELSDLEKFTGRKEPTVIT 1069          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: AIQ80989.1 (UDP-glucose pyrophosphorylase/phosphoglucomutase [Saccharina japonica])

HSP 1 Score: 427.9 bits (1099), Expect = 2.600e-116
Identity = 205/309 (66.34%), Postives = 247/309 (79.94%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MG+  KG P+   +G  +P+FGAAADGDADRNMILG +FFVTPSDS+AII A A+ IP+F  +GGLKGVARSMPTSGA+DLVA ++N+  FETPTGWKFFGNLMDS+E+GG +++PFICGEESFGTGSDH+REKDGMWAVLAW+SILAH+NK+  +PLV+VE+IVR+HW TYGRNYY RYDYEGV    A  M+  M + FA  TG ++  G+ +A ADEFEY DPVDGSV+S QGIR L +DGSRV+FRLSGT   GAT+RMY+EKY+ +   L   P EAL  LV + LKLS L+E TGR  PTVIT
Sbjct:  764 MGLTNKGLPLPEMDGKKVPSFGAAADGDADRNMILGDRFFVTPSDSVAIIAAQANCIPYFSSKGGLKGVARSMPTSGALDLVAAKMNIRFFETPTGWKFFGNLMDSKELGGEDFSPFICGEESFGTGSDHIREKDGMWAVLAWLSILAHFNKDAAQPLVTVEAIVRQHWATYGRNYYTRYDYEGVAADSANQMMDHMRAHFAEWTGAEM-DGFSIAKADEFEYKDPVDGSVASRQGIRILMSDGSRVVFRLSGTGSVGATIRMYIEKYEKEADRLDQVPSEALSGLVALGLKLSQLRERTGRENPTVIT 1071          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: CBN79734.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 426.8 bits (1096), Expect = 5.800e-116
Identity = 206/309 (66.67%), Postives = 245/309 (79.29%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MG+  KG      EG  +P+FGAAADGDADRNMILG +FFVTPSDS+AII A A+ IP+F+ +GGLKGVARSMPTSGA+DLVAK++N++ FETPTGWKFFGNLMDS+E+GG +++PFICGEESFGTGSDHVREKDGMWAVLAW+SILA +NK+  + LV+VE IVR+HW TYGRNYY RYDYEGV    A  M+  M S FA  TG ++  G+ +A ADEFEY DPVDGS++S QGIR L +DGSRV+FRLSGT   GAT+RMY+EKY+ D   L   P EAL  LV + LKLS L+E TGR  PTVIT
Sbjct:  764 MGLTNKGAKDPESEGKKVPSFGAAADGDADRNMILGDRFFVTPSDSVAIIAAQANCIPYFKSKGGLKGVARSMPTSGALDLVAKKMNINFFETPTGWKFFGNLMDSKELGGQDFSPFICGEESFGTGSDHVREKDGMWAVLAWLSILADFNKDPAQKLVTVEDIVRQHWATYGRNYYTRYDYEGVSAESANKMMDHMRSHFADWTGAEM-DGFSIAKADEFEYKDPVDGSIASRQGIRILMSDGSRVVFRLSGTGSVGATIRMYIEKYEKDADKLDQVPSEALSGLVALGLKLSQLRELTGRENPTVIT 1071          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: XP_009036707.1 (hypothetical protein AURANDRAFT_25705 [Aureococcus anophagefferens] >EGB08721.1 hypothetical protein AURANDRAFT_25705 [Aureococcus anophagefferens])

HSP 1 Score: 426.8 bits (1096), Expect = 5.800e-116
Identity = 212/310 (68.39%), Postives = 246/310 (79.35%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MGVD  G PV    G  +P+FGAA+DGD DRNMILG +FFVTPSDSLAI+ AHADVIPF  +QGGLK VARSMPTSGAVD VA+ LNL+LFETPTGWKFFGNLMDS+ + GG +YTPF+CGEESFGTGSDHVREKDG+WAVLAW+S+LA YN +   PLV+VE+IV++HW TYGRNYY RYDYEGVDK  A  M+  MT+  AA TG K+ G Y +A AD F Y DPVDGSVS +QG+R+L  DGSRVIFRLSGTAGSGATVR+Y+EKY P    L       +G+LV +AL LS+L +FTGR  PTVIT
Sbjct:  281 MGVDKTGAPV---PGGDVPSFGAASDGDGDRNMILGSRFFVTPSDSLAILAAHADVIPFVANQGGLKAVARSMPTSGAVDRVAEALNLALFETPTGWKFFGNLMDSKALFGGVDYTPFLCGEESFGTGSDHVREKDGLWAVLAWLSVLASYNSDASAPLVTVETIVKKHWATYGRNYYCRYDYEGVDKAEATKMMAKMTADAAANTG-KVCGAYTIATADVFAYEDPVDGSVSKNQGVRFLMADGSRVIFRLSGTAGSGATVRLYIEKYVPPSGSLHDVVSNVVGDLVAIALDLSDLAKFTGRESPTVIT 586          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: GAX25814.1 (phosphoglucomutase [Fistulifera solaris])

HSP 1 Score: 420.2 bits (1079), Expect = 5.400e-114
Identity = 209/310 (67.42%), Postives = 246/310 (79.35%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MG+D  G  ++   G  IP FGAAADGD DRNMILG+QFFV+PSDSLA+IVA+AD IPFFR QGGLKGVARSMPTSGAVDLVAK LN SLFETPTGWK+FGNLMDS+E+ GG +YTPFICGEESFGTGS+HVREKDG+WAVLAW+ ILA  N +  +PL +VE IV  HW  YGRNYY R+D+EGVDK +A AM+  M S   A TG K  G Y +A AD+F Y DPVDGSVS +QGIR+L  DGSR+IFRLSGTAGSGATVRMY+E+Y+P+K  + +   EALG+L+ +AL L ++  F G  EPTVIT
Sbjct:  753 MGLDRNGMKIDVPAGSKIPDFGAAADGDGDRNMILGKQFFVSPSDSLAVIVANADAIPFFRTQGGLKGVARSMPTSGAVDLVAKDLNYSLFETPTGWKYFGNLMDSKELFGGEDYTPFICGEESFGTGSNHVREKDGIWAVLAWLQILAVANPDATQPLTTVEDIVTAHWRKYGRNYYSRWDFEGVDKVKATAMIDKMRSDAEANTG-KTVGKYKIAKADDFTYVDPVDGSVSKNQGIRFLMEDGSRIIFRLSGTAGSGATVRMYIEQYEPEK--IDMVASEALGDLIRIALDLCDINGFLGTEEPTVIT 1059          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: GAX13287.1 (phosphoglucomutase [Fistulifera solaris])

HSP 1 Score: 420.2 bits (1079), Expect = 5.400e-114
Identity = 208/310 (67.10%), Postives = 246/310 (79.35%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MG+D  G  ++   G  IP FGAAADGD DRNMILG+QFFV+PSDSLA+IVA+AD IPFFR QGGLKGVARSMPTSGAVDLVAK LN SLFETPTGWK+FGNLMDS+E+ GG +YTPFICGEESFGTGS+HVREKDG+WAVLAW+ ILA  N +  +PL +VE IV  HW  YGRNYY R+D+EGVDK +A AM+  M S   A TG K  G Y +A AD+F Y DPVDGSVS +QGIR+L  DGSR+IFRLSGTAGSGATVRMY+E+Y+P+K  + +   EAL +L+ +AL L +++ F G  EPTVIT
Sbjct:  753 MGLDRNGMKIDVPAGSAIPDFGAAADGDGDRNMILGKQFFVSPSDSLAVIVANADAIPFFRTQGGLKGVARSMPTSGAVDLVAKDLNYSLFETPTGWKYFGNLMDSKELFGGEDYTPFICGEESFGTGSNHVREKDGIWAVLAWLQILAVANPDASQPLTTVEDIVTAHWRKYGRNYYSRWDFEGVDKVKATAMIDKMRSDAEANTG-KTVGKYKIAKADDFTYVDPVDGSVSKNQGIRFLMEDGSRIIFRLSGTAGSGATVRMYIEQYEPEK--IDMVASEALSDLIRIALDLCDIKGFVGTEEPTVIT 1059          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: OQR99190.1 (phosphoglucomutase [Achlya hypogyna])

HSP 1 Score: 417.9 bits (1073), Expect = 2.700e-113
Identity = 212/310 (68.39%), Postives = 246/310 (79.35%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MGVDAKGN V  +   V PAFGAA DGDADRNMILG +FFVTPSDSLA+I A+A+VIPFFR +GGL+GVARSMPTSGAVDLVAK+L +SLFE PTGWKFFGNLMDS+E+ G  +YTPFICGEESFGTGS+H+REKDGMWAVLAW+SILA  N   G PLVSVE IV +HW TYGRNYY RYDYEGVDK  AE M+  M ++  A  GE L  G+ +A  D+F Y DPVDGS+S +QGIR++FTDGSR+IFRLSGT  +GAT+RMY+EKY+P    L     +AL  L+D  L LS L+ FTGR EPTVIT
Sbjct:  755 MGVDAKGNAVHGQTNAV-PAFGAACDGDADRNMILGSRFFVTPSDSLAVIAANANVIPFFRKKGGLRGVARSMPTSGAVDLVAKKLGISLFEVPTGWKFFGNLMDSKEVYGKEDYTPFICGEESFGTGSNHIREKDGMWAVLAWLSILAAKN-SPGAPLVSVEDIVVDHWKTYGRNYYCRYDYEGVDKAAAEKMMAAMVATNKA--GETL-NGFTLASNDQFTYHDPVDGSISRNQGIRFIFTDGSRIIFRLSGTGVAGATIRMYIEKYEPATGNLAQSAADALRPLIDAGLTLSALEAFTGRKEPTVIT 1059          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: XP_008862586.1 (hypothetical protein H310_01296 [Aphanomyces invadans] >ETW08781.1 hypothetical protein H310_01296 [Aphanomyces invadans])

HSP 1 Score: 417.5 bits (1072), Expect = 3.500e-113
Identity = 210/310 (67.74%), Postives = 243/310 (78.39%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MGVDAKG  V   +    PAFGAA DGDADRNMILG +FFVTPSDSLA+I A+A+VIPFFR +GGL+GVARSMPTSGAVDLVA +L +SLFE PTGWKFFGNLMDS+E+    +YTPFICGEESFGTGS+H+REKDGMWAVLAW+SI+A  N   G PLV+V+ IV  HW TYGRNYY RYDYEGVDK  AE M+  M SS A++ G K+  G+ V V DEF Y DPVDGSVS HQGIR++FTDGSRVIFRLSGT  +GAT+RMY+EKY+P    L     +AL  L+ V L+LS L+ FTGR  PTVIT
Sbjct:  755 MGVDAKGVAVHG-QSTEPPAFGAACDGDADRNMILGSRFFVTPSDSLAVIAANANVIPFFRKKGGLRGVARSMPTSGAVDLVAAKLGISLFEVPTGWKFFGNLMDSKEVYNKEDYTPFICGEESFGTGSNHIREKDGMWAVLAWLSIIASKNTSPGAPLVTVQQIVENHWATYGRNYYCRYDYEGVDKAGAEKMMAAMASS-ASLAG-KVYHGFTVKVNDEFTYNDPVDGSVSKHQGIRFIFTDGSRVIFRLSGTGVAGATIRMYVEKYEPATGNLSQSAADALNTLIQVGLELSQLEHFTGRKAPTVIT 1061          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: OQS04893.1 (phosphoglucomutase [Thraustotheca clavata])

HSP 1 Score: 416.4 bits (1069), Expect = 7.800e-113
Identity = 211/310 (68.06%), Postives = 244/310 (78.71%), Query Frame = 0
Query:    1 MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            MGVDAKG P+  +   V P+FGAA DGDADRNMILG +FFVTPSDSLA+I A+A+VIPFFR +GGL+GVARSMPTSGAVDLVAK+L +SLFE PTGWKFFGNLMDS+E+ G  +YTPFICGEESFGTGS+H+REKDGMWAVL+W+SILA  N   G+PLV VE IV  HW TYGRNYY RYDYEGVDK  AE M+  M S  A   GE L  G+ V   DEF Y DPVDGS+S +QGIR++FTDGSR+IFRLSGT  +GAT+RMY+EKY+P    L     EAL  L+D  L LS LQ +TGR+EPTVIT
Sbjct:  755 MGVDAKGMPIHGQSHKV-PSFGAACDGDADRNMILGSRFFVTPSDSLAVIAANANVIPFFRKKGGLRGVARSMPTSGAVDLVAKKLGISLFEVPTGWKFFGNLMDSKEVYGKEDYTPFICGEESFGTGSNHIREKDGMWAVLSWLSILAAKN-TPGQPLVGVEDIVVNHWKTYGRNYYCRYDYEGVDKVAAEKMMAAMAS--AKKAGETL-NGFTVKFNDEFTYHDPVDGSISRNQGIRFIFTDGSRIIFRLSGTGVAGATIRMYIEKYEPATGNLAQSAAEALRPLIDAGLALSALQSYTGRSEPTVIT 1059          
BLAST of NO13G01290 vs. NCBI_GenBank
Match: XP_009821527.1 (hypothetical protein H257_00501 [Aphanomyces astaci] >ETV89127.1 hypothetical protein H257_00501 [Aphanomyces astaci])

HSP 1 Score: 414.5 bits (1064), Expect = 3.000e-112
Identity = 209/312 (66.99%), Postives = 246/312 (78.85%), Query Frame = 0
Query:    1 MGVDAKGNPV--EAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFFGNLMDSREM-GGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHYNKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSSFAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFRLSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFTGRTEPTVIT 310
            +GVDAKG  V  +AKE   +PAFGAA DGDADRNMILG +FFVTPSDSLA+I A+A+VIPFFR +GGL+GVARSMPTSGAVDLVA +L +SLFE PTGWKFFGNLMDS+ +    +YTPFICGEESFGTGS+H+REKDGMWAVLAW+SI+A  N   G PLVSV++IV  HW TYGRNYY RYDYEGV+K  A+ MV  M SS  ++ G+    G+ V V DEF Y DPVDGSVS+HQG+RY+FTDGSRVIFRLSGT  +GAT+RMY+EKY+     L     +AL  L+ V L+LS L+ FTGR EPTVIT
Sbjct:  755 LGVDAKGVAVYGQAKE---VPAFGAACDGDADRNMILGSRFFVTPSDSLAVIAANANVIPFFRKKGGLRGVARSMPTSGAVDLVAAKLGISLFEVPTGWKFFGNLMDSKAVYNKEDYTPFICGEESFGTGSNHIREKDGMWAVLAWLSIIASKNATPGAPLVSVQNIVENHWATYGRNYYCRYDYEGVEKAGADKMVAAMASS-PSLAGQTF-HGFTVKVNDEFTYNDPVDGSVSAHQGVRYIFTDGSRVIFRLSGTGVAGATIRMYVEKYEAASGNLSQSAADALKTLIQVGLELSQLEHFTGRKEPTVIT 1061          
The following BLAST results are available for this feature:
BLAST of NO13G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21792.14.800e-15587.38phosphoglucomutase [Nannochloropsis gaditana][more]
AIQ80989.12.600e-11666.34UDP-glucose pyrophosphorylase/phosphoglucomutase [... [more]
CBN79734.15.800e-11666.67conserved unknown protein [Ectocarpus siliculosus][more]
XP_009036707.15.800e-11668.39hypothetical protein AURANDRAFT_25705 [Aureococcus... [more]
GAX25814.15.400e-11467.42phosphoglucomutase [Fistulifera solaris][more]
GAX13287.15.400e-11467.10phosphoglucomutase [Fistulifera solaris][more]
OQR99190.12.700e-11368.39phosphoglucomutase [Achlya hypogyna][more]
XP_008862586.13.500e-11367.74hypothetical protein H310_01296 [Aphanomyces invad... [more]
OQS04893.17.800e-11368.06phosphoglucomutase [Thraustotheca clavata][more]
XP_009821527.13.000e-11266.99hypothetical protein H257_00501 [Aphanomyces astac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01290.1NO13G01290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01290.1NO13G01290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01290 ID=NO13G01290|Name=NO13G01290|organism=Nannochloropsis oceanica|type=gene|length=1306bp
ATGGGAGTAGATGCGAAGGGCAACCCGGTGGAAGCGAAGGAGGGGGTGGT
CATCCCGGCGTTTGGCGCAGCAGCGGACGGCGATGCGGATCGGAACATGA
TTTTGGGGAGGCAGTTTTTCGTGACTCCTAGTGATAGCCTGGCTATCATC
GTGGCGCATGCCGACGTTATCCCGTTTTTCCGGGACCAGGGGGGGTTGAA
AGGCGTGGCGCGGTCGATGCCCACGAGTGGAGCGGTGGACTTGGTGGCGA
AACGGTTGAATCTGTCTTTGTTCGAGACGCCGACCGGCTGGAAATTCTTC
GGGAACCTGATGGATTCACGGGAGATGGGGGGGGCGAATTACACGCCGTT
TATTTGTGGGGAGGAGAGTTTCGGAACGGGGAGTGATCATGTGAGGGAGA
AGGATGGGATGTGGGCAGTATTGGCTTGGATGTCGATTTTAGCGCACTAC
AACAAGGAGGAGGGCGAGCCCTTGGTGTCTGTGGAGAGCATCGTGAGGGA
GCATTGGACGACGTATGGCAGgtaggtcttgaaaaaaaaagggggtggag
agttagaaagcgatagggaggataagtgtacgactgtgtgtgcgtaggtg
aggcggcttctttatgacatgtgcttcgcgtagcagcagcaccagcagta
ccagcaccaggaccagcattagctgcgcaatccgccgctcaattttcatc
attgacctccacacattcacgcaccttccctccttttttatcgtctcaca
gAAATTATTACGTCCGCTACGACTATGAGGGTGTGGATAAGACGAGGGCC
GAGGCCATGGTTACGTTCATGACTTCTTCCTTTGCGGCAGTCACGGGCGA
GAAGCTTGGAGGTGGATATGTTGTTGCAGTGGCGGACGAATTTGAATACA
CAGACCCGGTGGATGGCTCTGTGTCATCTCATCAAGGGATCAGgtttgga
gggggggagggaggggggtgtgatgcctttgttaccgaatcaagcttctc
ttttggggtgggggtcgtattttgtatgttttcactcgggtcattcctct
gtccctccttttgcccttctttttcctccacgtactcagGTATTTATTCA
CAGATGGGTCGCGTGTGATTTTCCGTTTGTCAGGCACGGCGGGTAGCGGG
GCGACGGTCCGTATGTATTTGGAGAAGTACCAGCCTGACAAGACCATGCT
GGGGCTGCACCCGTTGGAGGCGCTAGGGGAGTTGGTGGATGTGGCGCTGA
AGCTGTCCAATTTGCAGGAGTTCACAGGAAGGACGGAGCCAACGGTGATC
ACGTGA
back to top

protein sequence of NO13G01290.1

>NO13G01290.1-protein ID=NO13G01290.1-protein|Name=NO13G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=310bp
MGVDAKGNPVEAKEGVVIPAFGAAADGDADRNMILGRQFFVTPSDSLAII
VAHADVIPFFRDQGGLKGVARSMPTSGAVDLVAKRLNLSLFETPTGWKFF
GNLMDSREMGGANYTPFICGEESFGTGSDHVREKDGMWAVLAWMSILAHY
NKEEGEPLVSVESIVREHWTTYGRNYYVRYDYEGVDKTRAEAMVTFMTSS
FAAVTGEKLGGGYVVAVADEFEYTDPVDGSVSSHQGIRYLFTDGSRVIFR
LSGTAGSGATVRMYLEKYQPDKTMLGLHPLEALGELVDVALKLSNLQEFT
GRTEPTVIT*
back to top
Synonyms
Publications