NO13G01140, NO13G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETI40217.1 (hypothetical protein F443_14343 [Phytophthora parasitica P1569] >ETM40193.1 hypothetical protein L914_13806 [Phytophthora parasitica]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETK80321.1 (hypothetical protein L915_13982 [Phytophthora parasitica]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETL33743.1 (hypothetical protein L916_13884 [Phytophthora parasitica] >ETP09963.1 hypothetical protein F441_14224 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETL87027.1 (hypothetical protein L917_13676 [Phytophthora parasitica]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: XP_008909948.1 (hypothetical protein PPTG_14413 [Phytophthora parasitica INRA-310] >ETN04554.1 hypothetical protein PPTG_14413 [Phytophthora parasitica INRA-310]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETO68916.1 (hypothetical protein F444_14348 [Phytophthora parasitica P1976]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: ETP38084.1 (hypothetical protein F442_14188 [Phytophthora parasitica P10297]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: KUF87065.1 (Centrosomal protein of 72 kDa [Phytophthora nicotianae]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: KUF94434.1 (hypothetical protein AM588_10007000 [Phytophthora nicotianae]) HSP 1 Score: 80.5 bits (197), Expect = 1.900e-11 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRRRKGWVEEGVRGVCEEAQLRHVGQLLAVHREMNDVALA 421 L +G RL+AVG+GI V+ R+ P ++ +T +YLS N++ S +G+EQFP + LS+ NL+S ++ +L L GNPL + +P YRL V+ +L +L+VLD ++T ER A V + ++ + +L+ + QL+++H+ +A Sbjct: 72 LCDGARLNAVGKGIHVLGRVPPT----------------------------VSASVTALYLSQNNLRSLKGIEQFPAVRLLSVGGNLISSDKEVARLNELAQLRNLNLMGNPLCD-QPNYRLRVIAVLTKLQVLDNSDITKKERHAAPHVAAQDDALRTMVLQNHFDIQKLQRIAQLISLHKTFYGYVMA 232
BLAST of NO13G01140 vs. NCBI_GenBank
Match: XP_002906280.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65681.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 75.1 bits (183), Expect = 8.000e-10 Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 0 Query: 231 LMNGQRLSAVGRGITVIDRLYPAXXXXXXXXXXXXXXXXXXXXXQHVFTERMARQITTVYLSDNDISSCRGLEQFPFLSSLSLSNNLLSRLEDXXXXXXXXXXXSLLLTGNPLVENEPCYRLCVLGLLPRLRVLDKEEVTAAERERAGEVWRR---RKGWVEEGVRGVCEEAQLRHVGQLLAVHR 413 + +G RL+AVG+G+ V+ R+ P ++ +T +YLS N + S G+EQF + LS+ NL++ ++ +L L GNPL + +P YRL ++ +L +L+VLD ++T ER+ A V + +G V + G+ +L+ + QL+++H+ Sbjct: 1 MCDGARLNAVGKGLHVLGRVPPT----------------------------VSASVTALYLSQNSLRSLEGIEQFSAVRLLSVGGNLIASEKEVAILNDLAQLRNLNLMGNPLCD-QPNYRLRIIAMLDKLQVLDNSDITKKERDAAPHVAAQDNALRGMVSQNHFGI---QKLQRIAQLISLHK 153 The following BLAST results are available for this feature:
BLAST of NO13G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01140 ID=NO13G01140|Name=NO13G01140|organism=Nannochloropsis oceanica|type=gene|length=1952bpback to top protein sequence of NO13G01140.1 >NO13G01140.1-protein ID=NO13G01140.1-protein|Name=NO13G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bpback to top Synonyms
Publications
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