NO13G01130, NO13G01130 (gene) Nannochloropsis oceanica

Overview
NameNO13G01130
Unique NameNO13G01130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1456
Alignment locationchr13:351085..352540 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:351085..352540 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01130.1NO13G01130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01130.1NO13G01130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01130 ID=NO13G01130|Name=NO13G01130|organism=Nannochloropsis oceanica|type=gene|length=1456bp
AGGGGGAGGAGGAGGGCGGGAAGGAGGGCGGGAGGGAGGACGGGAGAGCC
AGTTGTCCTCTCCTGTTGGGGGGTGGACCAGCCATCACACTCTTGGCAGG
TCACGAGCCCGTCTAGCCCTGCGTCCCCCCCTTCCTCCCTTTCAACCTGC
TGTTTCTCGCTCCTGGCCACCACTACCACACGCGCATGCCGCTGCCCCTC
CCTCCCTCCCTTCCTCCCCCTCCCCAACCTCTTTGGCATCACGGGCGTCG
TTTTCATTGCTTGACCCGGTGGCTCGTCGACAGGAGGTCCACAGACGTTA
CACCCAACTGTTGAAAACCCGTTTTGGACGAGGAAAAGGAGGAGGAGGAC
GGGGAGGAGGAGGACGGGGAGGGAGGGGCGGAGGGATGTTGGGGTTCGGG
AGCAGTAGTAGACGGGCAGTGATTGAGCCTGTGGTAGTGAGTAGGATGAA
GAGAGGAGGAGGAAAGAGGGGGGGAGGGAGGGGGGGAGGGAGGGCAGGAA
GGAGGGGAGATGAGGAGACTTTGTTTCCGGGAGAGGTGGAAGCGAGCTCG
GTGGGTTGGTTTGATGAGGAGGACGACGAAGAGGAGAAGAGTGAGGGAGG
GAGTGGAGGAGGGGAGTATTATGGATTGACTTCTTTTGTGAGAGCCAAAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGACCAGTATCAGCACCGGCAGCAA
TGCTACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTG
TCAGCAACAGAAGCATTCTGCCTCAGCACCGCTAAGCCCTTCGAGTTGTG
TGAGTGTGATAAGTATGGTGGGCTCCCTACCTCCCCAGCAGGAGGACCCG
GAGGTAGAGGGAAAAGGAGGGAAGGAGGAAGGAGAAGGAGGAGGAGGAAA
AGGAGGGCCGAGCACACTTTCGCCCACACGCAGAGGGAGGAGGATCGACG
AGATGTACGAAGAGGGGGAGGACGAGGAGGACGAGGAGGACGAGGAGGAG
GGCATTTCTCTCTACCACCCTGAAGCCCTCCCTTCCCCTTGCCGTCACGA
CCTCACCGAGGAGGAACGCCTCTTCCACTCTTCTCTCCCTCCTTCCCTTC
CTCCTTCCCGCCTTGTCCCCGATGGGAGCATCAAGGGCCTTCAGCAGCAA
GTGGCTTTTCTATACACCCACCTCCACGCCCTCGTCGAGAATGAGGAAGA
GCTGTCTGTCCTACATCAAACCTTGACACATAAAATAAGGCAAGTGCAAC
GGGCGCGCCTTGACGAAAGCGAGATGATGGTGGAAGGAATGAGCAAGGCG
GAAAGGGAATATGCGAGGTTGGGGAGGCTGAAGGAGAAGCTAAGAAGAAG
GGTATTGGTGATGAGGAGGGAGGGGGGGAGATAGCGAGGGAGGAAGAAGA
GAGGGATGAGCTGAGAAGGAGAAGGGCGGTGGTGGTGGAGGAGGGAGGGA
GGGAGG
back to top

protein sequence of NO13G01130.1

>NO13G01130.1-protein ID=NO13G01130.1-protein|Name=NO13G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MLGFGSSSRRAVIEPVVVSRMKRGGGKRGGGRGGGRAGRRGDEETLFPGE
VEASSVGWFDEEDDEEEKSEGGSGGGEYYGLTSFVRAKGGGGGGGGGDQY
QHRQQCYQQQQQQQQQQQQQQCQQQKHSASAPLSPSSCVSVISMVGSLPP
QQEDPEVEGKGGKEEGEGGGGKGGPSTLSPTRRGRRIDEMYEEGEDEEDE
EDEEEGISLYHPEALPSPCRHDLTEEERLFHSSLPPSLPPSRLVPDGSIK
GLQQQVAFLYTHLHALVENEEELSVLHQTLTHKIRQVQRARLDESEMMVE
GMSKAEREYARLGRLKEKLRRRVLVMRREGGR*
back to top
Synonyms
Publications