NO13G01080, NO13G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01080 vs. NCBI_GenBank
Match: EWM21779.1 (DIX domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 165.2 bits (417), Expect = 2.700e-37 Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRLSMDVSAKPTAAG 99 MIRYYIPGDGDDA+HPNIFHLPPS + PP LRDVRQ+FPLPG YHFRFK RL+GTPD K VW D+TED AE+P DG +AKVSR+ M++ +KPTAAG Sbjct: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKPTAAG 98
BLAST of NO13G01080 vs. NCBI_GenBank
Match: CBN75002.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5 bits (236), Expect = 2.600e-16 Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLR--DVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRLS 88 MIRY+IP DGDD +HPN+F LP ++R DV ++FPLPG YHFRFKK+ + VW DI + A +P CDG AK++RLS Sbjct: 1 MIRYFIPADGDDPSHPNVFQLPSGLVGSGSVRCGDVERHFPLPGRYHFRFKKKFR----DAFVWVDIADPGAAVPSCDGVFTAKITRLS 85
BLAST of NO13G01080 vs. NCBI_GenBank
Match: XP_012898418.1 (uncharacterized protein [Blastocystis hominis] >CBK24370.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 88.2 bits (217), Expect = 4.100e-14 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 2 IRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRL 87 + YYIP DGD+A HPN+ L +A + TL+D+R+ FP+PG Y+FRFK+ T N +WFD+TED+ +P DG I K +RL Sbjct: 7 VLYYIPEDGDEADHPNVMTLDKNA-SQVTLKDIREAFPIPGTYYFRFKR----TFKNSWIWFDVTEDSEVVPKFDGLIFVKATRL 86
BLAST of NO13G01080 vs. NCBI_GenBank
Match: XP_014529765.1 (hypothetical protein JH06_0829 [Blastocystis sp. subtype 4] >KNB46324.1 hypothetical protein JH06_0829 [Blastocystis sp. subtype 4]) HSP 1 Score: 85.9 bits (211), Expect = 2.000e-13 Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRL 87 +I+YYIP DGDD HPN++ + + T+ D+R +FP+PG Y+FRFK+ + T +WFD+++D +P DGTI+ KV+RL Sbjct: 6 VIQYYIPEDGDDMDHPNVYSIDKKS-TTITVTDIRNSFPIPGTYYFRFKRAFKKT----WIWFDVSKDDEVVPSFDGTIMMKVTRL 86
BLAST of NO13G01080 vs. NCBI_GenBank
Match: OEU10509.1 (hypothetical protein FRACYDRAFT_271062 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.7 bits (208), Expect = 4.600e-13 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 2 IRYYIPGDGDDATHPNIFHLPPSARN---PPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNK----PVWFDITEDTAEIPVCDGTILAKVSRLSM 89 IRY++P DGD + PN+F L P R+ PP VR +FPLPG YHFRFK L D + PVW D E+ +P G+I+AKV+R++M Sbjct: 4 IRYFVPEDGDIESEPNVF-LAPKPRHPGTPPAFGQVRDSFPLPGQYHFRFKSALIPGSDREKGAMPVWMDFAEERQPVPTWMGSIVAKVTRINM 96
BLAST of NO13G01080 vs. NCBI_GenBank
Match: CCA21458.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 84.0 bits (206), Expect = 7.800e-13 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRL 87 M+ Y+IP DGD + H N+ LP A + TL+ V++NFPLPG +HFRFK + EGT VW D+T+ +P DG I++K+SR+ Sbjct: 4 MLNYFIPEDGDTSDHMNVVPLP--AVDQLTLKHVKENFPLPGDFHFRFKTQFEGT----YVWLDLTDGNDVVPSYDGIIVSKISRI 83
BLAST of NO13G01080 vs. NCBI_GenBank
Match: CEL98194.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.0 bits (206), Expect = 7.800e-13 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPP--TLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRLS 88 +I Y++PGD DD HPN F P ++P L+DV+Q FPLPG YHFRFK R E + VW D+T D + +P+ + ++AKV R+S Sbjct: 16 LIHYHLPGDKDDPDHPNAF---PILKSPEEIKLKDVKQKFPLPGVYHFRFKYRQE----SSFVWIDVTNDDSRVPMFNQKVVAKVLRIS 97
BLAST of NO13G01080 vs. NCBI_GenBank
Match: XP_002286403.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96044.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.4 bits (202), Expect = 2.300e-12 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 0 Query: 2 IRYYIPGDGDDATHPNIFHLPPSAR--NPPTLRDVRQNFPLPGAYHFRFKKRL-EGTPDNK---PVWFDITEDTAEIPVCDGTILAKVSRL 87 +RY++P DGD PN+F P +R PP L ++ +FPLPGA+HFRFK L GT K VW D TE+ +PV G I+AKV+R+ Sbjct: 4 VRYFLPEDGDIEDTPNVFLAPKPSRPGYPPLLGQIKDSFPLPGAFHFRFKTALVPGTDREKHAVAVWMDCTEEEEPVPVWQGAIVAKVTRI 94
BLAST of NO13G01080 vs. NCBI_GenBank
Match: OWZ23639.1 (hypothetical protein PHMEG_0001443 [Phytophthora megakarya]) HSP 1 Score: 82.0 bits (201), Expect = 3.000e-12 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRLSMDVSAKPTAAGRTGFP 104 M+ YY+P DGD + H N+ LP + L+ V+++FPLPGA+HFRFK EGT VW D+ D +P +G ++ K+SR+ S +P A RT P Sbjct: 4 MLNYYVPEDGDSSDHLNVVPLPRVEQ--LRLQHVKKSFPLPGAFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVICKISRVQRQSSTRP--AERTETP 98
BLAST of NO13G01080 vs. NCBI_GenBank
Match: XP_009827538.1 (hypothetical protein H257_04644 [Aphanomyces astaci] >ETV82867.1 hypothetical protein H257_04644 [Aphanomyces astaci]) HSP 1 Score: 81.6 bits (200), Expect = 3.900e-12 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0 Query: 1 MIRYYIPGDGDDATHPNIFHLPPSARNPPTLRDVRQNFPLPGAYHFRFKKRLEGTPDNKPVWFDITEDTAEIPVCDGTILAKVSRLSMDVSAKPTA 97 M Y+IP DGD H NIF +P +N L +++ FP+PG +HFRFK+ EGT VW D+ +D +P +G I++K+SR+S P+A Sbjct: 4 MFNYFIPDDGDTPDHLNIFPIPSQHKNSLKLSHIKKEFPIPGQFHFRFKQAFEGT----YVWLDVDDDD-PVPDFNGLIISKISRISDSEVPSPSA 94 The following BLAST results are available for this feature:
BLAST of NO13G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01080 ID=NO13G01080|Name=NO13G01080|organism=Nannochloropsis oceanica|type=gene|length=786bpback to top protein sequence of NO13G01080.1 >NO13G01080.1-protein ID=NO13G01080.1-protein|Name=NO13G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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