NO13G01070, NO13G01070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_007514677.1 (predicted protein [Bathycoccus prasinos] >CCO14917.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 80.5 bits (197), Expect = 8.500e-12 Identity = 46/155 (29.68%), Postives = 74/155 (47.74%), Query Frame = 0 Query: 85 CLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWK 240 C+ L + GS GV+L RPT + ++++ + FS + ++ GG+ G LH + A V G+F GG A ++KE + DP FK++ Y W PGQLE++ A G W + ++ L+ IAL + LW+ Sbjct: 194 CVILLLEHSKDGSMGVILNRPTMYKMADVVND-ENGPFSENALYFGGDVGDGTVSFLHGSPDVADAEEVSPGVFIGGFNDAGRLVKEGKK-------DPREFKFFARYCGWAPGQLEDECARGVWYPVACSRQ-------IALKPVIALPKPLWR 333
BLAST of NO13G01070 vs. NCBI_GenBank
Match: CUS37391.1 (conserved exported hypothetical protein [Candidatus Nitrospira nitrosa]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 60 IPTPLAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQ-IPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNR-FKWWFNYMSWGPGQLEEQIANGSWDVMEGG 216 +P+P+ +G LLVA P + +++ LF+ ++ + G+ G+VL RPT L+E+ +NH +F GG G VLL Q +P AR + G++ G E ++ GL PN F+ + + W PGQLE ++ GSW V+ G Sbjct: 29 VPSPVQKGSLLVASPSLSDPNFTRTVLFIVEHG-QGGTIGLVLNRPTDVLLAEVLQDLPVLKQTNHRLFAGGPVGRTQLVLLFRLKQLLPDARHIANGIYVGTPMVLERVIA---------GLKPNEAFRAFAGFAGWAPGQLESEMREGSWGVLSSG 176
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_001421041.1 (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >ABO99334.1 predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 54/180 (30.00%), Postives = 87/180 (48.33%), Query Frame = 0 Query: 66 QGCLLVAKPWEY----NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTL 242 +GCLLVA E+ +F L L + E GS GV+L RPT + + ++ ++ F+ + ++ GG+ G LH + G+ V G++ GG A ++ Q+DG+ H + FK++ Y W PGQLE + G W + KE L+Q I L + LW+ + Sbjct: 85 KGCLLVAADHEFRMSQQYFHQAVILVLEHH--ENGSMGVILNRPTQYDMGYVSGE-ANGPFAKNALYFGGDVGDGTVSFLHGREDVKGSVEVLPGVYLGGYDSACELV--QQDGSTCHA---DEFKFFARYCGWAPGQLESECERGVWFPVAAAKE-------LSLKQVIQLPKPLWREI 249
BLAST of NO13G01070 vs. NCBI_GenBank
Match: WP_090749866.1 (YqgE/AlgH family protein [Candidatus Nitrospira nitrosa]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 60 IPTPLAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQ-IPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNR-FKWWFNYMSWGPGQLEEQIANGSWDVMEGG 216 +P+P+ +G LLVA P + +++ LF+ ++ + G+ G+VL RPT L+E+ +NH +F GG G VLL Q +P AR + G++ G E ++ GL PN F+ + + W PGQLE ++ GSW V+ G Sbjct: 33 VPSPVQKGSLLVASPSLSDPNFTRTVLFIVEHG-QGGTIGLVLNRPTDVLLAEVLQDLPVLKQTNHRLFAGGPVGRTQLVLLFRLKQLLPDARHIANGIYVGTPMVLERVIA---------GLKPNEAFRAFAGFAGWAPGQLESEMREGSWGVLSSG 180
BLAST of NO13G01070 vs. NCBI_GenBank
Match: OYT19199.1 (hypothetical protein CCU26_12955 [Nitrospira sp. UW-LDO-01]) HSP 1 Score: 79.7 bits (195), Expect = 1.500e-11 Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 0 Query: 60 IPTPLAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQ-IPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNR-FKWWFNYMSWGPGQLEEQIANGSWDVM 213 +P+P+ +G LLVA P + +++ LF+ ++ + G+ G+VL RPT LSE+ +NH +F GG G VLL Q +P AR + G++ G E ++ GL PN F+ + + W PGQLE ++ GSW V+ Sbjct: 31 VPSPVQKGSLLVASPSLSDPNFTRTVLFIVEHG-QGGTIGLVLNRPTDVLLSEVLQDLPVLKQTNHRLFAGGPVGRTQLVLLFRLKQLLPDARHIANGIYVGTPMVLERVIA---------GLKPNEAFRAFAGFAGWAPGQLESEMREGSWGVL 175
BLAST of NO13G01070 vs. NCBI_GenBank
Match: GAX79744.1 (hypothetical protein CEUSTIGMA_g7185.t1 [Chlamydomonas eustigma]) HSP 1 Score: 79.3 bits (194), Expect = 1.900e-11 Identity = 47/156 (30.13%), Postives = 80/156 (51.28%), Query Frame = 0 Query: 66 QGCLLVAKPWEY---NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELA-PPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKE 218 +G LL+A P + + ++ + L +D ETGS GV+L RP+ + L +L F + +++GG+ G + +LH ++ G + V G++ GG++GA + + E TAD F+W+ Y WGPGQL+ + G W G + Sbjct: 148 RGALLLAHPLMFEQSQQYFHQAVILLLDHD-ETGSIGVILNRPSDYNLGKLVLSEPQMGQFDSCRLYVGGDVGDNRMQMLHSIQELQGCKEVVKGVYMGGIEGARSKVVAGE-ATADD------FRWYAGYAGWGPGQLQSECKRGVWFTAAGSPD 295
BLAST of NO13G01070 vs. NCBI_GenBank
Match: PTL96877.1 (hypothetical protein DA396_07820 [Bacteroidetes bacterium] >PTL98902.1 hypothetical protein DA440_08160 [Bacteroidetes bacterium] >PTM16873.1 hypothetical protein DA445_04580 [Bacteroidetes bacterium] >PTM18449.1 hypothetical protein DA444_04305 [Bacteroidetes bacterium]) HSP 1 Score: 78.6 bits (192), Expect = 3.200e-11 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 0 Query: 66 QGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVM 213 +G LL+++P + F +S ++L +D + GS G L + +A +A F + + +F GG GD LH + GA G GLF G G +L++ + LD +FK++ Y W GQLEE+I++G+W V+ Sbjct: 9 EGTLLISRPLIGDGFFEQSVVYLTTHD-QDGSMGFTLNKQSAL----IAQDFMNQLPGEDPIFYGGPVEGDALFYLHTLDTLNGAMPAGNGLFLG---GDYTVLQDAIKTARELNLDSAKFKFFLGYSGWAAGQLEEEISHGTWIVL 147
BLAST of NO13G01070 vs. NCBI_GenBank
Match: CBJ27043.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6 bits (187), Expect = 1.200e-10 Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 0 Query: 66 QGCLLVAKPWEYN---HFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYG--QIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSW 210 +GCL+VAK +++ + +++ +FL YD E GS G +L RPT+ L +L + F ++LGG+ G +LHP+G ++ + + G++ GG + E + A + FK+ + W PGQLE++I G W Sbjct: 204 KGCLIVAKSTQFSMAQTYFNEAVIFLASYD-EAGSAGFILNRPTSVQLGDLVEGNALRQFQKTPLYLGGDVGEGNVQILHPFGPEKLTDSMEIIPGVYIGG------AVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVW 345
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_005848010.1 (hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis] >EFN55908.1 hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]) HSP 1 Score: 76.6 bits (187), Expect = 1.200e-10 Identity = 42/145 (28.97%), Postives = 72/145 (49.66%), Query Frame = 0 Query: 66 QGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELA-PPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSW 210 +GCLLVA+P + + + L ++D GS G+V+ PT +S L + F +F+GG ++ +LH + GA + G+F GG++ A +++ E P F Y WGPGQL++++ +G+W Sbjct: 139 RGCLLVARPRPGLGMFANTVILLLEHDDREGSSGLVINMPTPLLISNLGLEEDIADAFRQCPLFIGGPVTKNLLHVLHARRDVEGALEIIEGVFAGGVESASELVRRGE-------ASPKDFMLLSGYSGWGPGQLQQELRSGTW 276
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_002185368.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43037.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-10 Identity = 53/191 (27.75%), Postives = 96/191 (50.26%), Query Frame = 0 Query: 24 HRHRQQRRPPFITLSASTSDKPLVAEGIDIQCPPPGIPTPLAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGS----RGVVLERPTAFTLSELA---PPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVG-GGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIAN 207 H + + P + +SA +D + ++ G + G +L+A EY+H+ ++ +F++ + RGV+L++PT FTL E+ P + ++ +F GG++GGD VLLH + +I G S+G G+F GG A A ++ T+D FK +FNY + ++E+ +A+ Sbjct: 36 HHRCRNGKTPILGMSAGKNDGD-ASPSSKVRFLGKGERAIVRPGVVLLAPTNEYHHYYRQAAIFVHAMGEDDDDVYVIRGVILDQPTPFTLGEMMEHNPALQKTPLKDNLLFRGGDKGGDQVVLLHNHEEI-GQSSIGVSGVFQGGFDQAMAACEKGHRQTSD-------FKLFFNYCEFTELEMEDLLAS 217 The following BLAST results are available for this feature:
BLAST of NO13G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01070 ID=NO13G01070|Name=NO13G01070|organism=Nannochloropsis oceanica|type=gene|length=923bpback to top protein sequence of NO13G01070.1 >NO13G01070.1-protein ID=NO13G01070.1-protein|Name=NO13G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
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