NO13G01070, NO13G01070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01070 vs. NCBI_GenBank
Match: EWM21777.1 (Protein of unknown function DUF179 [Nannochloropsis gaditana]) HSP 1 Score: 284.3 bits (726), Expect = 3.900e-73 Identity = 135/189 (71.43%), Postives = 156/189 (82.54%), Query Frame = 0 Query: 27 RQQRRPPFITLSASTSDKPLVAEGIDIQCPPPGIPTPLAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGG 216 R+ RR ++L DKPL+AEGI+I+ P G+P L QG +LVAKPWEYNHFTSKSCLFLYK+D ETGSRGVVLE+PTAFTLSELAPPF++SVF+NHTVFLGGEQGGDMAVLLHPY +PG RSVGGGL+YGGL GAEAM KEQE+ A+HGLD ++FKWWFNYMSWGPGQLE+Q G + GG Sbjct: 40 RRGRRSTTLSL-----DKPLLAEGINIRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQGGRASVAGG 223
BLAST of NO13G01070 vs. NCBI_GenBank
Match: KOO23911.1 (hypothetical protein Ctob_001926 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.4 bits (228), Expect = 2.200e-15 Identity = 56/193 (29.02%), Postives = 103/193 (53.37%), Query Frame = 0 Query: 60 IPTP---LAQGCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTLRRHYLPRE 250 +P P L G +++A P ++H+ +S + + ++ P+ G++GV+L T +T+ +LAP + F+ + VFLGG+ G D ++H ++PGA VG G++ GG+ +A L+ +G L P+RFK+++ + W P L I +G++ V+E G +G +R +W +R + E Sbjct: 16 LPRPAESLGPGSVILAHPGSFDHYFLESLVLILEHGPD-GTKGVLLNHETPWTVEDLAPDAKMAPFAANAVFLGGDAGRDTITMVHGEFELPGAVEVGQGVYTGGV---DAALRAVTEG----ALPPDRFKFFYKSVEWLPNALPVAITSGTFQVIELSPGFLFGQSG---------QRSMWAEVREELVKEE 191
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_005837874.1 (hypothetical protein GUITHDRAFT_103478 [Guillardia theta CCMP2712] >EKX50894.1 hypothetical protein GUITHDRAFT_103478 [Guillardia theta CCMP2712]) HSP 1 Score: 91.3 bits (225), Expect = 4.800e-15 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 67 GCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAP-PFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVG-GGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDV 212 GC+LVA P E +HF + + L ++ + GS+GVVLE TAF L E+AP F +++F GG G D ++LH + ++ +G G+F GG++ + ++ E G A ++ K++FN+ W PGQLE +I +W V Sbjct: 120 GCVLVASPEEVDHFFRHAVVLLLEHS-DGGSKGVVLEMATAFMLQEMAPAAFLEHPLGENSLFRGGSSGNDKVIMLHALEDVQTSKPIGRHGVFAGGMQEVKELVSE---GRA----SSDQVKFFFNHCEWLPGQLEREIEQKTWRV 258
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_024388538.1 (uncharacterized protein LOC112288523 [Physcomitrella patens] >XP_024388539.1 uncharacterized protein LOC112288523 [Physcomitrella patens] >PNR45708.1 hypothetical protein PHYPA_015479 [Physcomitrella patens]) HSP 1 Score: 86.7 bits (213), Expect = 1.200e-13 Identity = 52/186 (27.96%), Postives = 90/186 (48.39%), Query Frame = 0 Query: 67 GCLLVAKP---WEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSV--FSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTLRRHYLP 248 GCLL+A P E + + +F++ +D GS GV+L RPT ++L +L F + S+ ++ GG+ G ++H + +R + G++ GG + ++ + PN ++W+ + WGPGQLE+++A G W + K VL+Q I L + LW + H P Sbjct: 145 GCLLIAHPNAFTESQQYFHRVVIFIFAHD-AGGSAGVILNRPTQYSLGQL-DEFKDLMPELSSCPLYFGGDVGPQCTQVIHGIPGLEDSREIMNGVYMGGTASIQDNIRSGQS-------TPNDYRWFLRFAGWGPGQLEQEVAAGVWYLASCSKR-------FVLKQCIQLPKPLWNEVMEHMGP 314
BLAST of NO13G01070 vs. NCBI_GenBank
Match: CBJ32813.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 86.3 bits (212), Expect = 1.600e-13 Identity = 49/147 (33.33%), Postives = 81/147 (55.10%), Query Frame = 0 Query: 67 GCLLVAKPWEYNHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGG-GLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVM 213 G +LVA Y T K+ +Y++ SR V +++ FT+ E++ SN+ +F GG+ GG+ A+++HP+ I G+R +G GLF GG A +++E + P FK++FN++SW G L+EQ+ G W V+ Sbjct: 29 GSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTG-DLGPLSNNRLFRGGDDGGEAAIMIHPH-DIMGSRPLGDTGLFVGGFVTALDLVEENK-------AKPGDFKFFFNHLSWPAGALQEQVGKGLWKVV 166
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_005647700.1 (DUF179-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE23156.1 DUF179-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 85.5 bits (210), Expect = 2.700e-13 Identity = 53/181 (29.28%), Postives = 92/181 (50.83%), Query Frame = 0 Query: 66 QGCLLVAKPWEY---NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAP-PFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIA----LERELW 239 +GCLL+A P + + +++ +F++++ E GS G++L +PT +T+ ++ F+N+ +FLGG+ + +LH +GQ+P A + G+ GG A+A + + D FKW+ Y WG GQL+ + A+G W + VL+QG A RE+W Sbjct: 49 KGCLLIAHPLVFTTQQQYFAQAVIFIFEHS-EQGSAGLILNKPTQYTIGTMSGLEALCPEFNNNGLFLGGDVSPNSMHMLHCHGQLPEAVEIIRGINMGGFDAAKAAVSQGRMPATD-------FKWFTRYSGWGAGQLQRECASGVWFTAAAS-------SALVLQQGCADSADSGREMW 214
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_003082513.1 (Protein of unknown function UPF0301 [Ostreococcus tauri] >CAL56370.1 Protein of unknown function UPF0301 [Ostreococcus tauri]) HSP 1 Score: 84.3 bits (207), Expect = 5.900e-13 Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 66 QGCLLVAKPWEY----NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTL 242 +GCLLVA E+ +F L L + E GS G++L RPT + + ++ S F+ + ++ GG+ G LH + G+ V G++ GG + A ++ Q+DG+ H P+ FK++ Y W PGQLE + G W + KE L+Q I L + LW+ + Sbjct: 72 KGCLLVAADQEFRMSQQYFHQAVILVLEHH--ENGSMGIILNRPTQYNMGYVSGE-PSGPFAENALYFGGDVGDGTVSFLHGREDVKGSVEVLPGVYLGGYESACELV--QQDGSTCH---PDEFKFFARYCGWAPGQLESECERGVWYPIAAAKE-------LSLKQVIQLPKPLWREI 236
BLAST of NO13G01070 vs. NCBI_GenBank
Match: OUS46153.1 (hypothetical protein BE221DRAFT_192138 [Ostreococcus tauri]) HSP 1 Score: 84.3 bits (207), Expect = 5.900e-13 Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 66 QGCLLVAKPWEY----NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTL 242 +GCLLVA E+ +F L L + E GS G++L RPT + + ++ S F+ + ++ GG+ G LH + G+ V G++ GG + A ++ Q+DG+ H P+ FK++ Y W PGQLE + G W + KE L+Q I L + LW+ + Sbjct: 122 KGCLLVAADQEFRMSQQYFHQAVILVLEHH--ENGSMGIILNRPTQYNMGYVSGE-PSGPFAENALYFGGDVGDGTVSFLHGREDVKGSVEVLPGVYLGGYESACELV--QQDGSTCH---PDEFKFFARYCGWAPGQLESECERGVWYPIAAAKE-------LSLKQVIQLPKPLWREI 286
BLAST of NO13G01070 vs. NCBI_GenBank
Match: EJK76913.1 (hypothetical protein THAOC_01294 [Thalassiosira oceanica]) HSP 1 Score: 83.6 bits (205), Expect = 1.000e-12 Identity = 58/190 (30.53%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 67 GCLLVAKPWEYNHFTSKSCLFLY-----KYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGG------GLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQ---IANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTLR 243 G +LV+ +E++HF +S +F+Y ET R VV++ PTAF + E++P +S + +N+T+F GG G D +LLH G + G+ G G++ GG+ + K+ + G +DP++ K++FNYM +G QL++ + WD + E V + +G +LW LR Sbjct: 65 GSVLVSPSFEFDHFLMRSAIFVYAIGEDDQQDETIIRAVVIDHPTAFDIGEMSPTVTSRL-ANNTLFRGGYDGSDAVMLLHSAGGMDGSVETTGSEIGCSGIYEGGISSIQ---KQVDAGL----IDPSQCKFFFNYMEFGLKQLDDMFRTVGVPDWDSWTSIEIPPEMVLSSEYARG-----QLWAKLR 241
BLAST of NO13G01070 vs. NCBI_GenBank
Match: XP_003057066.1 (predicted protein [Micromonas pusilla CCMP1545] >XP_003059356.1 predicted protein [Micromonas pusilla CCMP1545] >EEH56488.1 predicted protein [Micromonas pusilla CCMP1545] >EEH58711.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 82.8 bits (203), Expect = 1.700e-12 Identity = 62/200 (31.00%), Postives = 93/200 (46.50%), Query Frame = 0 Query: 66 QGCLLVAKPWEY----NHFTSKSCLFLYKYDPETGSRGVVLERPTAFTLSELAPPFSSSVFSNHTVFLGGEQGGDMAVLLHPYGQIPGARSVGGGLFYGGLKGAEAMLKEQEDGTADHGLDPNRFKWWFNYMSWGPGQLEEQIANGSWDVMEGGKEGGEGVAGAVLRQGIALERELWKTLRR--HYLPRETGYDENGEEE 260 +GCLL+A E+ +F L L + E GS GV+L RPT + + + SS F+N+ ++ GG+ G LH ++ G V G++ GG A ++K DGT L P FK++ Y W PGQLE + G W + ++ L+Q I L + LW+ + R+T GEEE Sbjct: 180 KGCLLLASEEEFKLGQQYFHQAVILVLEHH--EKGSMGVILNRPTQYNMGYVGGD-DSSPFANNQLYFGGDVGDGTVSFLHGSSEVAGGSEVLPGVYLGGYDSACELVK---DGT----LKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQ-------LALKQVIQLPKPLWREVMELCGGELRQTSKRSYGEEE 362 The following BLAST results are available for this feature:
BLAST of NO13G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01070 ID=NO13G01070|Name=NO13G01070|organism=Nannochloropsis oceanica|type=gene|length=923bpback to top protein sequence of NO13G01070.1 >NO13G01070.1-protein ID=NO13G01070.1-protein|Name=NO13G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
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