NO13G00970, NO13G00970 (gene) Nannochloropsis oceanica

Overview
NameNO13G00970
Unique NameNO13G00970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5154
Alignment locationchr13:313537..318690 -

Link to JBrowse

Properties
Property NameValue
DescriptionT-complex protein 1 subunit alpha
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:313537..318690 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005515protein binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
IPR027410TCP-1-like_intermed
IPR002423Cpn60/TCP-1
IPR017998Chaperone_TCP-1
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_005854716.1 (t-complex protein 1 subunit alpha [Nannochloropsis gaditana CCMP526] >EKU21643.1 t-complex protein 1 subunit alpha [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 901.0 bits (2327), Expect = 2.000e-258
Identity = 494/596 (82.89%), Postives = 527/596 (88.42%), Query Frame = 0 
Query:    1 MAASAGQMLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHF-KAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPPGGMQGMQ 596
            MAASAGQMLLDG+RTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAV+FIK+KLVV VDQL+Q+NLLNAARTSMSSKILG E+DFFA+LAV+AV SVK +S H ++GK   KYPVSAIHILKCHGQSSLSSHLV+GFA+AG RAAQGMPTSV+PAKIALLDFSLQRHKMQ+GVSVVV+DVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIA+ATGGQV+GTLADMEGNEAFDP MLG+A+ VEERRVGDGEMLYI     G   G+AAT+VLRGANDYMLDEMDRALHD+LMV+KRMLESNSLVAGGGAVEAALS+HLE+YAMTLGSKEQLAIAAFS+ALLVIPRTLAVNAAQDATELVANLRAAHF                                              +WYAGLDL++G+VRNNLAAGVVEPAISKIKSLRFATEAAITILRIDD+IKLTE+SPGPP G  GMQ
Sbjct:    1 MAASAGQMLLDGQRTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVRFIKDKLVVSVDQLRQENLLNAARTSMSSKILGAEADFFAKLAVEAVLSVKADSQHRDSGKTVSKYPVSAIHILKCHGQSSLSSHLVNGFALAGARAAQGMPTSVSPAKIALLDFSLQRHKMQMGVSVVVEDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIARATGGQVIGTLADMEGNEAFDPSMLGLAERVEERRVGDGEMLYIL----GAKEGKAATVVLRGANDYMLDEMDRALHDALMVIKRMLESNSLVAGGGAVEAALSVHLEKYAMTLGSKEQLAIAAFSDALLVIPRTLAVNAAQDATELVANLRAAHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMWYAGLDLYKGLVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDMIKLTEKSPGPPDGRGGMQ 592
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: EWM21766.1 (t-complex protein 1 subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 897.5 bits (2318), Expect = 2.200e-257
Identity = 492/591 (83.25%), Postives = 525/591 (88.83%), Query Frame = 0 
Query:    1 MAASAGQMLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHF-KAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPPGG 591
            MAASAGQMLLDG+RTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAV+FIK+KLVV VDQL+Q+NLLNAARTSMSSKILG E+DFFA+LAV+AV SVKT+S H ++GK   KYPVSAIHILKCHGQSSLSSHLV+GFA+AG RAAQGMPTSV+PAKIALLDFSLQRHKMQ+GVSVVV+DVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIA+ATGGQV+GTLADMEGNEAFDP MLG+A+ VEERRVGDGEMLYI     G   G+AAT+VLRGANDYMLDEMDRALHD+LMV+KRMLESNSLVAGGGAVEAALS+HLE+YAMTLGSKEQLAIAAFS+ALLVIPRTLAVNAAQDATELVANLRAAHF                                              +WYAGLDL++G+VRNNLAAGVVEPAISKIKSLRFATEAAITILRIDD+IKLTE+SPGPP G
Sbjct:   22 MAASAGQMLLDGQRTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVRFIKDKLVVSVDQLRQENLLNAARTSMSSKILGAEADFFAKLAVEAVLSVKTDSQHRDSGKTVSKYPVSAIHILKCHGQSSLSSHLVNGFALAGARAAQGMPTSVSPAKIALLDFSLQRHKMQMGVSVVVEDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIARATGGQVIGTLADMEGNEAFDPSMLGLAERVEERRVGDGEMLYIL----GAKEGKAATVVLRGANDYMLDEMDRALHDALMVIKRMLESNSLVAGGGAVEAALSVHLEKYAMTLGSKEQLAIAAFSDALLVIPRTLAVNAAQDATELVANLRAAHFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMWYAGLDLYKGLVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDMIKLTEKSPGPPDG 608
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: CBN78761.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 729.9 bits (1883), Expect = 6.200e-207
Identity = 405/588 (68.88%), Postives = 466/588 (79.25%), Query Frame = 0 
Query:   12 GERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPP-----GGMQGM 595
            G+RT GQDVRT NVTA+ AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATIL+QL+VEHPAAKVLVELA LQDQEVGDGTTSVVIVAAELLKR NEL+ N +HPT++M+GYRLALKEAVK+IK  L VPVD+L + NL+NAA+T+MSSKILGPESDFFA++AVDAV +V+TES   + GK  VKYPVSA+HILKCHG S L S +  G+A+   RA+QGMPTSV  AKIA LD +LQR+KMQ+GV VVV DVKEV+ IRQREMDITKERI+KIL +GA VVLTTKGIDDL +KYFVEAGAMAVRRVKKED++RIAKATG  +V TLADMEGNE FDP +LG AD V E+RVGDGE+++ +    G     + T+VLRGAND+MLDEMDRALHDSLMV+KRMLESN LVAGGG+VE ALSI+LE +A TLGS+EQLAIA F+EALLVIP+TLAVNAAQDATELVA LRA H  +Q QE                                    K +  + GL+L EG VR+NLA GVVEPAISKIKS RFATEAAITILRIDD+IKL ++    P     GGM GM
Sbjct:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLINAAKTAMSSKILGPESDFFAEMAVDAVTAVRTES-GGDLGKKVVKYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGQADEVSEQRVGDGELIFFK----GTKTQASCTVVLRGANDFMLDEMDRALHDSLMVIKRMLESNVLVAGGGSVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQDATELVAKLRAYHNTSQLQE-----------------------------------DKTEYRHYGLELVEGKVRDNLACGVVEPAISKIKSFRFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMGGM 549
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_009840413.1 (T-complex protein 1, alpha subunit [Aphanomyces astaci] >ETV69970.1 T-complex protein 1, alpha subunit [Aphanomyces astaci])

HSP 1 Score: 724.2 bits (1868), Expect = 3.400e-205
Identity = 402/576 (69.79%), Postives = 462/576 (80.21%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG+RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+ LEVEHPA KVLV+LA LQDQEVGDGTTSVVI+AAELLKR NELV NKVHPTSI+SGYRLA++EAVK+IKE L VPVD L + +L+NAA+TSMSSKI+GPESDFFA L VDAV SVKT    ++ GK   KYPVSAI++LK HG+S+L S LVDGFA+   RA+Q MP+SV PAKIALLDF LQRHKMQ+GV +VV D KE++ IRQRE+DITKERIQKIL+AGANV+LTTKGIDDL MKYFVEAG M VRR KKEDL+RIAKATGGQVV TLADMEG E FD   LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ +LDEMDR+LHDSLMVVKR+LESN LVAGGGAVEAALSI+LE YA TLGS+EQLAIA F++ALLVIP+TLAVNAA+DA+ELVA LR AH    Q ++  T                                  DL ++GLDL +G VRNNL AGVVEPAISKIKSLRFATEAAITILRIDD+I+L  +
Sbjct:    3 LVVDGKRTSGKDVREQNVTAALAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAGKVLVDLAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKVHPTSIISGYRLAMREAVKYIKEHLSVPVDSLGRASLVNAAKTSMSSKIIGPESDFFANLVVDAVTSVKTTEDGAK-GKTITKYPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPSSVRPAKIALLDFDLQRHKMQMGVQMVVNDPKELDQIRQREIDITKERIQKILDAGANVILTTKGIDDLCMKYFVEAGCMGVRRCKKEDLRRIAKATGGQVVLTLADMEGGETFDAAALGTAAEVSEERVGDGELIYIK----GCANRQATTVVLRGANEMLLDEMDRSLHDSLMVVKRLLESNQLVAGGGAVEAALSIYLETYATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASELVARLR-AHHNTSQTDAAQT----------------------------------DLRFSGLDLLQGKVRNNLVAGVVEPAISKIKSLRFATEAAITILRIDDMIRLNPK 538
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_008876957.1 (T-complex protein 1, alpha subunit [Aphanomyces invadans] >ETV94195.1 T-complex protein 1, alpha subunit [Aphanomyces invadans])

HSP 1 Score: 720.3 bits (1858), Expect = 4.900e-204
Identity = 401/576 (69.62%), Postives = 462/576 (80.21%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG+RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVD+IGDVTITNDGATIL+ LEVEHPA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI+SGYRLA++EAVK+IKE L VPVD L + +L+NAA+TSMSSKI+GPES+FFA L VDAV SVKT +     GK+  KYPVSAI++LK HG+S+L S LVDGFA+   RA+Q MPTSV PAKIALLDF LQRHKMQ+GV +VV D KE++ IRQRE+DITKERIQKIL+AGANV+LTTKGIDDL MKYFVEAG M VRR KKEDL+RIAKATGGQVV TLADM+G E FD   LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ +LDEMDR+LHDSLMVVKRMLESN LVAGGGAVE+ALSI+LE YA TLGS+EQLAIA F++ALLVIP+TLAVNAA+DA+ELVA LRA H  +Q    T   Q A                               L ++GLDL  G VR+NLAAGVVEPAISKIKSLRFATEAAITILRIDD+I+L  +
Sbjct:    3 LVVDGKRTSGKDVREQNVTAALAIANIVKSSLGPVGLDKMLVDNIGDVTITNDGATILKMLEVEHPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKIHPTSIISGYRLAMREAVKYIKEHLSVPVDSLGRTSLVNAAKTSMSSKIIGPESEFFANLVVDAVTSVKT-TEEGAKGKVVTKYPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPTSVRPAKIALLDFDLQRHKMQMGVQMVVNDPKELDQIRQREVDITKERIQKILDAGANVILTTKGIDDLCMKYFVEAGCMGVRRCKKEDLRRIAKATGGQVVLTLADMDGGETFDAASLGTAAEVSEERVGDGELIYIK----GCANRQATTVVLRGANEMLLDEMDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLETYATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASELVARLRAHHNTSQ----TDAAQTA-------------------------------LRFSGLDLQRGNVRDNLAAGVVEPAISKIKSLRFATEAAITILRIDDMIRLNPK 538
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_002907483.1 (T-complex protein 1 subunit alpha [Phytophthora infestans T30-4] >EEY64047.1 T-complex protein 1 subunit alpha [Phytophthora infestans T30-4])

HSP 1 Score: 718.0 bits (1852), Expect = 2.400e-203
Identity = 395/576 (68.58%), Postives = 461/576 (80.03%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+QLEVE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI++GYRLA++EAVK+IKE L VPVD L +++L+NAA+TSMSSKILGPESDFFA L VDAV SV+ E   ++ GKI  KYPVS+I++LK HG+S+L + LVDGFA+   +A+Q MPT +  AKIALLDF LQRH+MQ+GV VVV D  E+ELIRQRE+DITKE+IQKI++AGANV+LTTKGIDDL +KYFVE+G M VRR KKEDL+RIAKATGGQVV TLADMEG E FDP  LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ MLDEMDR++HD+ MVVKRMLESN LVAGGGAVEAALSI+LE +A TLGS+EQLAIA F++ALLVIP+TLAVNAA+DA+ELVA LRA H  +Q   S                                   + +L ++GLDL EG VRNNL AGVVEPAISKIKSLRFATEAAITILRIDDLIKL  +
Sbjct:    6 LVVDGTRTSGKDVREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSLGRESLVNAAKTSMSSKILGPESDFFANLVVDAVSSVRVEQEGAK-GKIKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKIIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPSTLGEAQEVSEERVGDGELIYIK----GCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASELVARLRAHHNTSQSDAS-----------------------------------QRELRFSGLDLLEGTVRNNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPK 541
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_009517985.1 (hypothetical protein PHYSODRAFT_553624 [Phytophthora sojae] >EGZ30710.1 hypothetical protein PHYSODRAFT_553624 [Phytophthora sojae])

HSP 1 Score: 717.2 bits (1850), Expect = 4.100e-203
Identity = 396/576 (68.75%), Postives = 460/576 (79.86%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+QLEVE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI++GYRLA++EAVK+IKE L VPVD L +++L+NAA+TSMSSKILGPESDFFA L VDAV SVK E   ++ GKI  KYPVS+I++LK HG+S+L + LVDGFA+   +A+Q MPT +  AKIALLDF LQRH+MQ+GV VVV D  E+ELIRQRE+DITKE+IQK+++AGANV+LTTKGIDDL +KYFVE G M VRR KKEDL+RIAKATGGQVV TLADMEG E FDP  LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ MLDEMDR++HDS MVVKRMLESN LVAGGGAVEAALSI+LE +A TLGS+EQLAIA F++ALLVIP+TLAVNAA+DA+ELVA LRA H  +Q   + S                                   +L ++GLDL EG VRNNL AGVVEPAISKIKSLRFATEAAITILRIDDLIKL  +
Sbjct:    6 LVVDGTRTSGKDVREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSLGRESLVNAAKTSMSSKILGPESDFFANLVVDAVSSVKVEQEGAK-GKIKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVENGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPSTLGEAQEVSEERVGDGELIYIK----GCKTRQATTVVLRGANENMLDEMDRSMHDSFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASELVARLRAHHNTSQSDAAES-----------------------------------ELRFSGLDLLEGNVRNNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPK 541
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: OWZ22066.1 (T-complex protein 1, alpha subunit [Phytophthora megakarya])

HSP 1 Score: 716.1 bits (1847), Expect = 9.200e-203
Identity = 394/576 (68.40%), Postives = 459/576 (79.69%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+QLEVE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI++GYRLA++EAVK+IKE L VPVD L +++L+NAA+TSMSSKILGPESDFFA L VDAV SVK E   ++ GKI  KYPVS+I++LK HG+S+L + LVDGFA+   +A+Q MPT +  AKIALLDF LQRH+MQ+GV VVV D  E+E IRQRE+DITKE+IQK+++AGANV+LTTKGIDDL +KYFVE+G M VRR KKEDL+RIAKATGGQVV TLADMEG E FDP  LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ MLDEMDR++HD+ MVVKRMLESN LVAGGGAVEAALSI+LE +A TLGS+EQLAIA F++ALLVIP+TLAVNAA+DA+ELVA LRA H  +Q                                    +  K DL ++GLDL EG VRNNL  GVVEPAISKIKSLRFATEAAITILRIDDLIKL  +
Sbjct:    6 LVVDGTRTSGKDVREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSLGRESLINAAKTSMSSKILGPESDFFANLVVDAVSSVKVEQEGAK-GKIKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELEQIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPATLGEAQEVSEERVGDGELIYIK----GCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASELVARLRAHHNTSQ-----------------------------------SDAAKCDLRFSGLDLLEGTVRNNLEVGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPK 541
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: XP_008897075.1 (T-complex protein 1, alpha subunit [Phytophthora parasitica INRA-310] >ETI34236.1 T-complex protein 1, alpha subunit [Phytophthora parasitica P1569] >ETK74598.1 T-complex protein 1, alpha subunit [Phytophthora parasitica] >ETL81276.1 T-complex protein 1, alpha subunit [Phytophthora parasitica] >ETM34482.1 T-complex protein 1, alpha subunit [Phytophthora parasitica] >ETN17524.1 T-complex protein 1, alpha subunit [Phytophthora parasitica INRA-310] >ETO62991.1 T-complex protein 1, alpha subunit [Phytophthora parasitica P1976] >ETP04131.1 T-complex protein 1, alpha subunit [Phytophthora parasitica CJ01A1] >ETP32209.1 T-complex protein 1, alpha subunit [Phytophthora parasitica P10297] >KUF67065.1 T-complex protein 1 subunit alpha [Phytophthora nicotianae] >KUF98359.1 Axonemal dynein light intermediate polypeptide 1 [Phytophthora nicotianae])

HSP 1 Score: 715.7 bits (1846), Expect = 1.200e-202
Identity = 393/576 (68.23%), Postives = 461/576 (80.03%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+QLEVE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI++GYRLA++EAVK+IKE L VPVD L +++L+NAA+TSMSSKILGPESDFFA L VDAV SVK E   ++ GKI  KYPVS+I++LK HG+S+L + LVDGFA+   +A+Q MPT +  AKIALLDF LQRH+MQ+GV VVV D  E+ELIRQRE+DITKE+IQK+++AGANV+LTTKGIDDL +KYFVE+G M VRR KKEDL+RIAKATGGQVV TLADMEG E FDP  LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ MLDEMDR++HD+ MVVKRMLESN LVAGGGAVEAALSI+LE +A TLGS+EQLAIA F+++LLVIP+TLAVNAA+DA+ELVA LRA H  +Q                                    +  + +L ++GLDL EG VRNNL AGVVEPAISKIKSLRFATEAAITILRIDDLIKL  +
Sbjct:    6 LVVDGTRTSGKDVREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSLGRESLVNAAKTSMSSKILGPESDFFANLVVDAVSSVKVEQEGAK-GKIKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPSTLGEAQEVSEERVGDGELIYIK----GCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADSLLVIPKTLAVNAAKDASELVARLRAHHNTSQ-----------------------------------SDAAQRELRFSGLDLLEGTVRNNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPK 541
[Close]
BLAST of NO13G00970 vs. NCBI_GenBank
Match: ETL28020.1 (T-complex protein 1, alpha subunit [Phytophthora parasitica])

HSP 1 Score: 714.5 bits (1843), Expect = 2.700e-202
Identity = 393/576 (68.23%), Postives = 460/576 (79.86%), Query Frame = 0 
Query:    8 MLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTER 584
            +++DG RTSG+DVR  NVTA++AIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATIL+QLEVE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKR NELV NK+HPTSI++GYRLA++EAVK+IKE L VPVD L +++L+NAA+TSMSSKILGPESDFFA L VDAV SVK E   ++ GKI  KYPVS+I++LK HG+S+L + LVDGFA+   +A+Q MPT +  AKIALLDF LQRH+MQ+GV VVV D  E+ELIRQRE+DITKE+IQK+++AGANV+LTTKGIDDL +KYFVE+G M VRR KKEDL+RIAKATGGQVV TLADMEG E FDP  LG A  V E RVGDGE++YI+    G    +A T+VLRGAN+ MLDEMDR++HD+ MVVKRMLESN LVAGGGAVEAALSI+LE +A TLGS+EQLAIA F+++LLVIP+TLAVNAA+DA+ELVA LRA H  +Q                                    +  +  L ++GLDL EG VRNNL AGVVEPAISKIKSLRFATEAAITILRIDDLIKL  +
Sbjct:    6 LVVDGTRTSGKDVREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSLGRESLVNAAKTSMSSKILGPESDFFANLVVDAVSSVKVEQEGAK-GKIKAKYPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPSTLGEAQEVSEERVGDGELIYIK----GCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADSLLVIPKTLAVNAAKDASELVARLRAHHNTSQ-----------------------------------SDAAQRKLRFSGLDLLEGTVRNNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPK 541
The following BLAST results are available for this feature:
BLAST of NO13G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854716.12.000e-25882.89t-complex protein 1 subunit alpha [Nannochloropsis... [more]
EWM21766.12.200e-25783.25t-complex protein 1 subunit alpha [Nannochloropsis... [more]
CBN78761.16.200e-20768.88conserved unknown protein [Ectocarpus siliculosus][more]
XP_009840413.13.400e-20569.79T-complex protein 1, alpha subunit [Aphanomyces as... [more]
XP_008876957.14.900e-20469.62T-complex protein 1, alpha subunit [Aphanomyces in... [more]
XP_002907483.12.400e-20368.58T-complex protein 1 subunit alpha [Phytophthora in... [more]
XP_009517985.14.100e-20368.75hypothetical protein PHYSODRAFT_553624 [Phytophtho... [more]
OWZ22066.19.200e-20368.40T-complex protein 1, alpha subunit [Phytophthora m... [more]
XP_008897075.11.200e-20268.23T-complex protein 1, alpha subunit [Phytophthora p... [more]
ETL28020.12.700e-20268.23T-complex protein 1, alpha subunit [Phytophthora p... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001796NSK001796Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00970.1NO13G00970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625933gene_6913Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100298g8gene8663Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00970.1NO13G00970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00970 ID=NO13G00970|Name=NO13G00970|organism=Nannochloropsis oceanica|type=gene|length=5154bp
TATTCTCGTCGTCCCTTAGATCCTATCAAAATATGCGTGAAAAGCGTGGG
GAGGGGTGGATGATTCCGGTCGTGTGTCTGTTGCCCCGCCCCCTGCTTGT
TGTTGTTGAGCTTTGCGAATGCAATGTGCCGCTTGGTGGGTTGCCGCCAC
CAGTCCCGAAACCAGCGCCACGATCGTATAAATTGCCTTGTGCTACCAAT
GGCTGCACTGCTCTCCAGCATTGAGGCGACCAGTGGCAGGCTACAGGGCA
GAGACGATGCCCTCCATCTTTCTGCCTGTTTTATGATGATTTCTTGTCTC
TTTCCTCTCGCTCCTCGAGAGGCCTCGTTTGTCTCGCCCATAAAAATTGT
TCAAATACTACCATTACAATCATTGCAAAGGGTTTCCTCATGTGAAACAA
TCAATGGAGCAAACGCGACTGTACGTTTTAATTTCTGGCGGTCGCATTGT
ATCACTTTCATGAATTGCTCGCTGCTCAGCTGTCTCCCTTTATTTCTTTT
TTGGTGGTGCGAGGGTCGAATTTGTTATTTCTGTTGTGATTCCCGGAGGC
ATCCGTCGGGTCTCATAGTCAAGTTTTTGTCTGTTTCAAGTTTGTGCATA
AAGTCTCTAGTATGGTGCTTTGCCTTTCGTCCGGGGGGGAGGTTGATAAA
GGGGGGGGGAGGACTGGCACCATGCAAATGTCGGACGAAAACTTTATGGA
TGAGGCCCTGGACATGTAATTATTCATACGTTCGAGTACTTCATCCATAT
CTGTGATAACACGTCACTTTGTACATTAAAATCGAGTCCTGACTAAGTTG
TGAGTGCATGTCGTCCGTCCATGATGAAATCCACGCCCTAACGAAGTTCA
TGCTTGAACACAGGACAGGTTGAGTGGTGAATCAAGTAAACAAAGTGCTA
CTCGTCCAACGTGCAGACAGGTGATCGATTGGTGTGTTTCGGGGCCATCC
TGACGTTTAGAATTCGCTTTTGACACCTGCTCTCGATTTTTTTTTGTTCT
TGCTGTGTTTCTCGGTCGGTGGAGGGGATCCCTAGGATGGAGGGCGATCG
GTTGGATGGGAGTGTCGTGAATGGGTTGGTGTTTGTAGGTTGTCAGCCGA
GGTGGCATGAATCGATGGGCGTGTCGATGTAGTTTAGGACCAAAATTATC
ATGCGCCATACTACCACTCGTCTCCCCTCAGGTCTTACCTGCCTCTCGTC
CTGATAAAGGTAGGCGCGCATGGGTGAAACGACGATCAAATAAAGGAGAA
ACAGGCCGTCGACGTCAAGACAGCTACTTCTTCCATGTCAAATCCCTGCG
CCAACGCGATTGGCCCACACACGCCCCTCCTACGCCGCGACTCTTCCTCG
GCCTCGAATCCTGCCTTGGCGACCGCGGTTCGCTTTCGTCCCGCTCCTGC
TCCACGGTCATGCGTCTCATCTCTTGCTGATACCACCGTTGTTCCTGCTT
GATCTCGCACTCCAACCGCCCGCTTCTCCTGGTGCAATCGCCGGGCCTCC
TGGTGCTCTTGCCACATGCGGGTCATCGTCGAGCCATGGCGCTTCTGTAA
CACGCGCCCCGTGGCGCCCCTTTTCTCTCCCCTTTTCGATGCCTTTATTT
CCTCCTTCTCCGTCATTCTTGTTTGCTATCCTCTTCCGCTGCTTCATACT
CCTGGACTAGGCCAGCACTCCCTCGCTCCGTCCCCCTGGCGCGGAGCACG
GCGGCCCATATGGCGGTGATGGTAGTGGTAGAGGGCGGAGGAGATTGCGG
CCAAGGGTATAATCAATGGCCTCAGCCTGAAGGCAAAGCACGCGAGGCAT
CTTTATGGGGCTGGATGTTGTAAAAGTGTATATGTTGTAGATGAGGCAGG
CGAGCTCGATTTTTTCTTTTACGGAGTAGGTTGATGGAGACGGCACGGGC
ATTGATCAGTGAGGCAGCTAGCTTATCAAGCATGTGGTCTGCAAAGTGTT
CAGCTCCGTGCTTGGCGTGATAGAGTTTGAGGAGCTGGAGTTGAACAGTC
TCTTGGGCGGTGGAGGAGGGGAGCAGGGCATGGAAACGGCTTCTTTTCGT
CATCATCTCGGTTATTGTGGGTGGCGGACAGGCCCTCCGGACGGGCGTCG
CCGGCTTGAGCAATGGTCATGGTTTCCCTTACCTGTGTTTGGATAGCATG
GGACAGTGATGTGTCGAAGCTTCACGTTATCATTGATTTTCCTCCAGATT
GGGTTTATTTTTACTTGATGTCTTGACTGAAAATCGCCCACCGTCTCCCT
TTCTTTTCCGTGCCTCTTATCATGGACTTGGTCCTCTCTCATCACGCTGC
CACAAGCAGCGGTAGCACGAAGGTGAAGACAACGATTATGTGTACCTGAT
CTTGCGGGATCTATGCGGTTAAGTATGCTTTTCTTAACGCACTTTTTGGT
GCCGCCGCACGCCGCACCGCCCCGCCGCGCAGACATTTGTTCTACCGGGC
GGCGGCGTCGTACACAAGGAGCTGGTTTGGCTGCAAACGCACGCAGACTT
AGCATCATAATGCTATTCATGACACGATATTCATGCAGGAGACACGCTGT
GAGCGGAAAGAGCCCATGGATGGACTCTCTCAAACTAACGCGTCCCATCA
AAATACTCATCACTTTTCGCCTCCCCTCCATTCCTCCCTTCCCACTCCCA
AGAAGCACATAGCGACACGCACCTTGTCTAATCATAGCATCAGCACCTCC
ACAACTTTATCCCTTACATCAAAACCATGGCAGCTTCTGCGGGTCAGATG
CTCCTGGACGGAGAACGCACGTCGGGGCAGGACGTCCGCACCGCCAACGT
GACCGCCTCCATGGCCATCGCCAACATCGTTAAGTCTTCCCTTGGGCCCG
TCGGCCTTGACAAGATGCTTGTAGATGACATCGGTGATGTCACCATTACG
AATGATGGAGCGACGATCCTGCAGCAGTTGGAAGTGGAGCATCCTGCTGC
CAAAGTGTTGGTCGAGCTAGCGCACCTCCAAGACCAGGAAGTAGGGGATG
GGACGACGTCTGTCGTTATCGTCGCTGCGGAGCTCTTGAAGAGGGGGAAT
GAGCTGGTGATGAATAAGGTGCATCCTACCAGCATTATGAGTGGATATCG
GCTGGCGCTGAAGGAGGCGGTGAAGTTTATCAAGGAGAAGCTTGTGGTGC
CAGTGGACCAGgttaggacttagggagggtgggcagacgagggggaggga
ggaggaaaggtcgtagagaggcctcctttccatttgtatattcctttctt
caatccgtttttagcattaatttttttcgactcagtttcaaaaaaacttc
tcgcccttatgtgatgacactaatctgaccttccctctctccctcccttc
cccccttccctcctcgccctcccttttacagCTGCAACAAGATAACCTGC
TCAATGCCGCCCGCACCTCCATGAGCAGCAAAATCCTGGGGCCCGAATCC
GACTTTTTTGCTCAATTGGCTGTCGATGCTGTTCAGTCCGTGAAGACCGA
AAGTACCCACAGCGAGACAGGGAAAATAGGCGTCAAATACCCTGTTTCGG
CCATCCACATTCTTAAATGCCATGGCCAGTCCTCGCTCTCCTCCCACCTC
GTCGATGGCTTTGCGATTGCCGGGGGCCGTGCGGCCCAGGGGATGCCCAC
GTCTGTAACGCCCGCGAAAATTGCCTTGCTTGACTTCAGCTTACAACGGC
ACAAGATGCAGCTGGGGGTGAGTGTGGTGGTCAAGGACGTGAAGGAGGTC
GAGTTGATCCGGCAGAGGGAAATGGATATTACAAAGGAGCGGATCCAGAA
GATCTTGGAGGCGGGTGCAAACGTCGTGCTGACGACGAAGGGAATCGACG
ACCTGGCCATGAAGTATTTTGTGGAGGCCGGGGCCATGGCGGTGCGGAGG
GTGAAGAAAGAAGACTTGAAACGAATTGCCAAGGCAACGGGGGGGCAGGT
GGTGGGCACCTTAGCGGATATGGAGGGGAATGAAGCGTTTGATCCGGGTA
TGCTGGGGGTGGCGGATATGGTGGAGGAACGAAGGGTGGGGGATGGGGAG
ATGCTTTACATCAGGTTGAAGGAGGGAGGGAAAGGGGTGGGGAGGGCGGC
GACAATCGTGTTGCGGGGAGCGAATGATTACATGCTCGATGAAATGGACA
GGGCGTTGCACGATAGCCTGATGGTGGTCAAACGGATGCTTGAGAGCAAT
TCCTTGGTCGCGGGGGGCGGGGCCGTGGAGGCAGCCTTGTCCATCCACTT
GGAGGAATATGCCATGACGTTGGGAAGCAAAGAGCAATTAGCCATTGCCG
CATTTTCGGAGGCCTTGCTGGTCATCCCTCGGACTCTGGCTGTGAACGCG
GCGCAGGATGCCACCGAACTAGTTGCCAACCTGCGGGCGGCCCATTTCAA
GGCCCAGCAGCAGGAGTCGACGTCGACTGGACAGCAGGCCCCTGGGGGCA
TGGAACCGATGGGAGGGGGGGCGGCGTTGGGAGAGGAAGGGGATGGGGGA
GGGAAGGCGAAGAAGAATGGACAGAAGGATGATTTGTGGTATGCAGGCTT
GGATTTATTTGAGGGTGTGGTGAGGAATAATCTTGCGGCGGGGGTCGTGG
AGCCGGCGATCAGTAAGATTAAGAGTTTGAGGTTTGCCACGGAGGCGGCG
ATTACGATTTTGAGGATTGATGACTTGATCAAGCTGACAGAAAGGAGCCC
AGGGCCGCCGGGGGGGATGCAGGGGATGCAGTAATCCAATGGGGTTGAAA
GAGTGAAGATTTCGATGTCTATTATTTCCTCCATTTTCCTGTCTTCCTGG
TTCGCGGAGAAGGGGGAGCAGGAGTAGGAAGAGGAGGGCATGGGCATTGA
ATAATTTGTTTGAGTATGGGGAGGACCGAACAAGAAATCGGTATTTCTGT
GTAGTGACGGGATGGGTTGCAGCGAGAGAAAGGCAGAAGGCAGGAGGAGA
ATTAGAATATAGCCGACGATGACCGTTCATTCGTTAATCAATGAGGAAGT
CGATAGCGAGAAAGAAAAAGACAAACCAAAGAAAGTTGAGTGAAAAGGAT
ATGGTAATAACAACACAACAAATAAAATGGAGAAACCAAAAAAGGAGGAT
AAAAAACGACGACCAAACGAGTAGTTTGAGTACTGTTCTTGCGTGATTCT
TCTT
back to top

protein sequence of NO13G00970.1

>NO13G00970.1-protein ID=NO13G00970.1-protein|Name=NO13G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MAASAGQMLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVD
DIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVA
AELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDN
LLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPV
SAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQ
RHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGI
DDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDP
GMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEM
DRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAI
AAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPG
GMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGV
VEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPPGGMQGMQ*
back to top
Synonyms
Publications