NO13G00890, NO13G00890 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_005855319.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526] >EKU21038.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 323.6 bits (828), Expect = 4.800e-85 Identity = 155/189 (82.01%), Postives = 168/189 (88.89%), Query Frame = 0
Query: 25 STAPHAEPVEAATALAGPETYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPFR 214
S P +EP A T LAGP YSKALSLFHWLVG +M+GSVGAVLQAQQVKGKEKGVWM RHKSLGLLAG+L+APRFIFRL+SK+PAPMKEW+ EQ+ASK +HL LYG MVGMP +GIAMGYYGGKGLPFFWT DGAATANGEVAKQAFSIHKTMGTYGKYLIPLH+GAAGAH RGQAIF+RINPFR
Sbjct: 170 SPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHMGAAGAHMARGQAIFSRINPFR 358
BLAST of NO13G00890 vs. NCBI_GenBank
Match: EWM21751.1 (cytochrome b561 [Nannochloropsis gaditana]) HSP 1 Score: 274.2 bits (700), Expect = 3.300e-70 Identity = 143/199 (71.86%), Postives = 158/199 (79.40%), Query Frame = 0
Query: 2 MLRRLALAHRTVHLNKLVPRRNLSTA-----PHAEPVEAATALAGPETYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAA 196
ML R+ +A R + LV R LSTA EP A T LAGP YSKALSLFHWLVG +M+GSVGAVLQAQQVKGKEKGVWM RHKSLGLLAG+L+APRFIFRL+SK+PAPMKEW+ EQ+ASK +HL LYG MVGMP +GIAMGYYGGKGLPFFWT DGAATANGEVAKQAFSIHKTMGTYGK P + +A
Sbjct: 3 MLHRITMAPR---VRSLVSCRPLSTAXXXXXXXXEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSA 198
BLAST of NO13G00890 vs. NCBI_GenBank
Match: OEU20775.1 (Ni_hydr_CYTB-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 203.4 bits (516), Expect = 7.200e-49 Identity = 101/178 (56.74%), Postives = 126/178 (70.79%), Query Frame = 0
Query: 44 TYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNG---FEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAA------TANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPF 213
+Y+ S HWL +M+G VG VL+AQ+ ++KG WMFRHKSLGLL G++IAPR +R+ ++ ++E G E I +KISH GLY FM MP SGIAMGYYGGKGLPFF TTL G + GE+AKQ++ IHKT+GTYGKYLIPLH GAA H++RG +IFARINPF
Sbjct: 7 SYTVTASSLHWLSAGTMIGCVGCVLKAQESPKEDKGTWMFRHKSLGLLTGMIIAPRLAYRIFNRSAYKIEELAGASSIEHILAKISHGGLYAFMAIMPASGIAMGYYGGKGLPFFTTTLPGVVKTDENKKSTGEIAKQSYKIHKTLGTYGKYLIPLHAGAAATHSLRGHSIFARINPF 184
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_014160567.1 (hypothetical protein SARC_01202 [Sphaeroforma arctica JP610] >KNC86665.1 hypothetical protein SARC_01202 [Sphaeroforma arctica JP610]) HSP 1 Score: 196.8 bits (499), Expect = 6.700e-47 Identity = 105/204 (51.47%), Postives = 134/204 (65.69%), Query Frame = 0
Query: 11 RTVHLNKLVPR-RNLSTAPHAEPVEAATALAGPETYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPFR 214
+T+ ++ R + + AP A P AL G YSKA+S HWL +++G VG VL AQ +KGK +G MF HKSLGLL GI+ APR L+S+ PA N + + +H GLYGF++ MP +G+AMGYYGG GLPFFWT L GAA A+ ++ AF +HK +G YGK+LIPLHVGAAG RG+AIFARINPFR
Sbjct: 25 KTIAFGRIAQRPMSAAAAPSAVP-----ALTG---YSKAMSYMHWLTVPAVLGCVGTVLYAQTLKGKPRGNMMFWHKSLGLLTGIIAAPRVAVMLTSRKPAAFNT-NSIKAALAAATHYGLYGFLIIMPATGVAMGYYGGFGLPFFWTKLSGAAEADKSISGPAFKVHKFVGYYGKFLIPLHVGAAGFSFARGEAIFARINPFR 219
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_002293348.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89084.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 194.9 bits (494), Expect = 2.600e-46 Identity = 95/183 (51.91%), Postives = 127/183 (69.40%), Query Frame = 0
Query: 39 LAGPETYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKI---SHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATAN------GEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPF 213
++ + YS A S +HW+V + +MGS+ +VL+ QQ +EKG WMFRHKSLGLL G+++APR +R+ + + G I K+ SH LYGFM MP +GIAMGYYGG GLPFFWTT+ GA+ + G +AKQ+FSIHKT+GTYGKYLIP+HVG A H++ G +I++RINPF
Sbjct: 1 MSSAKAYSIAASYYHWVVAVPLMGSIASVLKCQQSPKEEKGKWMFRHKSLGLLTGLVVAPRLGYRIFNAAKYQIGHPAGTGPIEGKLADASHFLLYGFMTIMPATGIAMGYYGGNGLPFFWTTIPGASRTDENKATYGNIAKQSFSIHKTLGTYGKYLIPIHVGGAVKHSLAGTSIWSRINPF 183
BLAST of NO13G00890 vs. NCBI_GenBank
Match: GAX26606.1 (hypothetical protein FisN_21Lh073 [Fistulifera solaris]) HSP 1 Score: 193.0 bits (489), Expect = 9.700e-46 Identity = 92/172 (53.49%), Postives = 114/172 (66.28%), Query Frame = 0
Query: 45 YSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRL---SSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPFR 214
Y+ FHW+ + ++G VG VL+AQQ +EKG WMFRHKSLGLL G+++APR +R+ S + + E + +K H LY FM MP +GIAMG YGGKGLPFFWTT G NG +AK F IHK +G YGKY+IP+H GAA HA RGQAIFAR+NPFR
Sbjct: 8 YAMGARWFHWMTAVPLIGCVGTVLKAQQAPKEEKGKWMFRHKSLGLLTGMIVAPRVAYRIMGRSGYNVIGLPGTSSTESVLAKAGHAFLYVFMTVMPATGIAMGLYGGKGLPFFWTTFAGFEQTNGTIAKNTFQIHKQLGVYGKYMIPVHAGAAVMHATRGQAIFARMNPFR 179
BLAST of NO13G00890 vs. NCBI_GenBank
Match: GAX23243.1 (hypothetical protein FisN_21Hh073 [Fistulifera solaris]) HSP 1 Score: 191.8 bits (486), Expect = 2.200e-45 Identity = 91/172 (52.91%), Postives = 114/172 (66.28%), Query Frame = 0
Query: 45 YSKALSLFHWLVGLSMMGSVGAVLQAQQVKGKEKGVWMFRHKSLGLLAGILIAPRFIFRL---SSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPFR 214
Y+ FHW+ + ++G VG VL+AQQ ++KG WMFRHKSLGLL G+++APR +R+ S + + E + +K H LY FM MP +GIAMG YGGKGLPFFWTT G NG +AK F IHK +G YGKY+IP+H GAA HA RGQAIFAR+NPFR
Sbjct: 8 YAMGARWFHWMTAVPLIGCVGTVLKAQQAPKEDKGKWMFRHKSLGLLTGMIVAPRVAYRIMGRSGYNVIGLPGTSSTESVLAKAGHAFLYVFMTVMPATGIAMGLYGGKGLPFFWTTFAGFEQTNGTIAKNTFQIHKQLGVYGKYMIPVHAGAAVMHATRGQAIFARMNPFR 179
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_002507869.1 (predicted protein [Micromonas commoda] >ACO69127.1 predicted protein [Micromonas commoda]) HSP 1 Score: 149.8 bits (377), Expect = 9.400e-33 Identity = 81/179 (45.25%), Postives = 112/179 (62.57%), Query Frame = 0
Query: 34 EAATALAGPETYSKALSLFHWLVGLSMMGSVGAVLQAQQV---KGKEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARI 210
EAA+AL + Y+ L HWL+ +G+ V A + + EKG +M HKSLGL L PR RL++KIPA + + EQIA+++ HL +YG M MPVSG MGYYGG+GLPFF T+ GA+ +G++A +AF +HK +G Y + +PLHVGA G HA++GQ I R+
Sbjct: 75 EAASAL--EQQYATPLQALHWLIAGGTVGTFAFVQLAMNLPKDQAAEKGRFMMLHKSLGLCVLGLTIPRLALRLTTKIPAAV-PGSKAEQIAAQLGHLVMYGMMTAMPVSGFIMGYYGGRGLPFFGYTIPGASKRDGKLAGRAFKLHKQLGWYYEMFVPLHVGAVGMHAIKGQNIMRRM 250
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_009822844.1 (hypothetical protein H257_01377 [Aphanomyces astaci] >ETV87981.1 hypothetical protein H257_01377 [Aphanomyces astaci]) HSP 1 Score: 146.0 bits (367), Expect = 1.400e-31 Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = 0
Query: 40 AGPE--TYSKALSLFHWLVGLSMMGSVGAVLQAQQVKGK-EKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPM--KEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARINPFR 214
AGP+ Y+++ S+FHW+V G VG V AQ K EK M HKSL ++A +L+ R RL ++ P + +W EQ+ SHLGLYG M+G+P SGIAMGYY G G+PFF + + GA + ++ A+S HKTMG Y +PLHVGAA H RG IF RINPF+
Sbjct: 22 AGPDGTAYARSTSVFHWVVAGVFGGVVGTVKLAQNTTDKVEKLRLMNLHKSLAVIAAVLVPARIGTRLLTRSPQALAGPKW---EQLLGSASHLGLYGLMIGLPSSGIAMGYYSGFGIPFFGSRIPGAEKPDKSISGPAYSAHKTMGQALVYFVPLHVGAAFFHHFRGAQIFQRINPFK 197
BLAST of NO13G00890 vs. NCBI_GenBank
Match: XP_004988144.1 (hypothetical protein PTSG_10608 [Salpingoeca rosetta] >EGD80354.1 hypothetical protein PTSG_10608 [Salpingoeca rosetta]) HSP 1 Score: 145.2 bits (365), Expect = 2.300e-31 Identity = 73/168 (43.45%), Postives = 100/168 (59.52%), Query Frame = 0
Query: 43 ETYSKALSLFHWLVGLSMMGSVGAVLQAQQVKG-KEKGVWMFRHKSLGLLAGILIAPRFIFRLSSKIPAPMKEWNGFEQIASKISHLGLYGFMVGMPVSGIAMGYYGGKGLPFFWTTLDGAATANGEVAKQAFSIHKTMGTYGKYLIPLHVGAAGAHAVRGQAIFARI 210
E YS+ + HWLVG M+ V V AQ + K+KG +M HKS LL L+ PR RL+SK+P + + FEQ+A SH +Y M+GMPV+GI MGY+GGKGLPF+ + G T N +VA AF +HK MG +Y++ LH+GA H +G + R+
Sbjct: 70 EVYSRRMQALHWLVGAGMLTCVATVKMAQWTEDKKKKGQYMMIHKSTALLVAALVVPRVAIRLASKMPKALPGTSKFEQLAGSFSHFLMYVAMIGMPVTGITMGYFGGKGLPFYGAHIPGTDTPNKKVAGTAFKVHKKMGQVLEYVLALHIGATIFHMFQGIPMLTRM 237 The following BLAST results are available for this feature:
BLAST of NO13G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00890 ID=NO13G00890|Name=NO13G00890|organism=Nannochloropsis oceanica|type=gene|length=1945bpback to top protein sequence of NO13G00890.1 >NO13G00890.1-protein ID=NO13G00890.1-protein|Name=NO13G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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