NO13G00780, NO13G00780 (gene) Nannochloropsis oceanica

Overview
NameNO13G00780
Unique NameNO13G00780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2719
Alignment locationchr13:256582..259300 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:256582..259300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Position :
0
Zoom :
x 1
200400600800100012001400160018002000220024002600Sequence
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00780.1NO13G00780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00780.1NO13G00780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00780 ID=NO13G00780|Name=NO13G00780|organism=Nannochloropsis oceanica|type=gene|length=2719bp
ATGAAGGGCTGCGAGATGCTTGCGATTGCTTGCTCTCTCTGGTTCCTTTT
TGTGGACGATGACGCCCGGCACAACCAGCCGCACTACCTGGACCACAATC
TAAACAATGGCGTGCACGAgtacgagatcggcctgcatgcgtagaaagct
gtggcgtggccggggcggtgggaatgcgagaagtgcttgtggtatctttg
aacgggatgcgcccccgcctatcctctactgcgtctcaagaccaatgtcg
cgcatagcaagaagcccaaaaccatcaccaccacaacgagtagCCGCAAT
ATAGCCTCTTTCATCACCGCCATCTATGAAGGGAAACGCAGgtaagggtc
agtattcattctttcgatcgcctgactttcccttgtgtcctgcccgtact
gtcgtttgcctcagttgttgttgttgttgttgttgttgttgttgttgttg
ttgttttggtaatgattagaatagattctttccccgtaagatcgaccatg
gttcgaaactgaaagagccctgctctctctcaagccagagatgcggggtt
aaaatgaaaacaaaacgtacacaccacaacacacatacatacagcctaaa
tgggtgcacgaatgaataaatgagtttagttagaaccatttttccttatg
tcattcattctgtatacacacactttcatccctttctcctcctgtccagA
CAACCACCGATGATTGAGAGCGGTTCACAAGGACCAGCTACACGGGCAGC
ACTAACTATACGAGTACCAGCACAAGCAACAATAATAAAAGCAGCGGCAA
CAGCAACAGCCGCAACAGCGACAGAAGTTAAAGTAGCTTGCAGCTTTTCT
TTTTCAGCAAGTGACTTGAACGgtatgtatcgttattccaatatacttgc
atttccatctgcgttcgtaaaaccacccacgcctgtgtgtgtgtgtaaat
atgatgacctgaactatttccttaggacaccaacctagtctctaatctct
acggagaacgcccagagacgatgcgtacaacattagtttttcacagtttg
cctgaaacacacatgcacacacgaccgcacgcttgctcttgtctcttgga
tggttctgttctctttctccgtctcatctctctcatccccctcaatcttc
acagtttatcgtaaactatttaatgactgtctgacccttttcttgcgcaa
tttataacaatacagAGCTCCAACTGACATCTTCATCTGGATGGAGGAGC
TTCTCTTCTTCCACCTCCAACTCCGCGCGTACATCCTCAGCCTTTCCCGA
CTGCGTCACGCACCGCATCATCATgtaaggctcgccgccatatgggtgcg
aaattgaaaaatgatgatactttcaaccatatatgtaaagaagaaacgaa
aatcaaatgattaagaaactttaagatgacgagtccgacggccgcctctg
ttgtcgttggcttcttcctcccttgtcctctggagggcgcaacgcgggca
cggtacttgacgcgttctgcatctagtgcttgtgttcgtgcgctttcaat
tttaaggaggcttgggggggctagcgcgtggctgcttggggaataatcga
ggcatttgtatgatggttttttcttcgaaacttacttaatctgtctcttt
cttgctctgtgtttgtccagctaacgctcttcttctctcacttctcattc
agtaaaacacagaactttgaatgcatggtaaaaaaagcgatattggagca
gaagagcgcactacgacggccttagCCATGACGACAACGGCCATAGCGAG
AAGgtacgcgaagagtaaaagagaatgctttaataccttaatgtttcctc
ctctttattttcttacttttctcgggtaatgtctatcttatgcaggtatg
tctcgatgttgtttgctgtacaggccctatgacgaacacatggattcact
ttatgtgcgtctgattccaagtgaatgaacaataaacatgttgccttcct
actgagagcctcagccccaacaccatcaaaagcagcgcgtatggcgacca
tttgcctgcattttcgatccgtttctctcgtgtgcatcaaacgaccttca
ttttgatgactcttttcttctatcatcctccccttcttacagAGCTCTTC
AGCGGACCCCAGCACTGCGGCAACGACAGCAAAAGCGGAGGGACAGCCTT
GCACAAACAGTAACAGTTTTACTGTAAACCTATCACTTCACCTCTTGGCC
TTTCATCATCGCAATAACAGgtaagacattgtatccgcttcgaagaaagg
agggagtgagggagaaagggctgaaaaagaggaaggcctgatgatgaaga
ccaatgcacaatgggaatctctctgactgcatttccttataaaggagtgt
agatctttgatgagaaccgctgtcatccttgaacttaaggctagcttata
tccattcactcttcttttttgtcatcgggcggagggagggacggagggac
gcggggactaaggaggtgtaatgattatttaggtatcagtacgattgcaa
acaatttaaaaatggagggaaactcagcatttttaccccttccttaccac
ctcacgacagATCAAGGTACAGCCATTTGGGTCAGAAGGTGGGCGTTAGG
TGGCGGGGAAATGTTGGTAGCAGCCTGTGCACCGAAGGAGAGATGAAGCC
AAGAAAAATACATAAGTGA
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protein sequence of NO13G00780.1

>NO13G00780.1-protein ID=NO13G00780.1-protein|Name=NO13G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MKGCEMLAIACSLWFLFVDDDARHNQPHYLDHNLNNGVHDRNIASFITAI
YEGKRRQPPMIESGSQGPATRAALTIRVPAQATIIKAAATATAATATEVK
VACSFSFSASDLNELQLTSSSGWRSFSSSTSNSARTSSAFPDCVTHRIII
HDDNGHSEKSSSADPSTAATTAKAEGQPCTNSNSFTVNLSLHLLAFHHRN
NRSRYSHLGQKVGVRWRGNVGSSLCTEGEMKPRKIHK*
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Synonyms
Publications