NO13G00670, NO13G00670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00670 vs. NCBI_GenBank
Match: EWM21739.1 (thioredoxin [Nannochloropsis gaditana] >EWM21740.1 thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 317.8 bits (813), Expect = 5.700e-83 Identity = 164/219 (74.89%), Postives = 186/219 (84.93%), Query Frame = 0 Query: 81 ARAPSIIEVDVKNFVALLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLM-KGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESI 299 AR PS+IEVDVKNFVALL SPVPVILDCYA+WCDPCKKLTPVLE+IVGKYPGR+IL KLDVD H ELAAQL VSSLPAVFGLCEGKLVDRFVGMPTEP+LAGFLDKMLSIIP + EG G PS AE+QEA L AD+L+ +G GG E AT+AGALY+QVYEEL E+TPA YLQARCLAGLARCAL GGA EEA+++V +L+ +HKA+ME++ Sbjct: 119 ARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEG-KGEPSPAEKQEAVLKRADALLTEGTKEGGSGE--TATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETM 334
BLAST of NO13G00670 vs. NCBI_GenBank
Match: GBG25366.1 (Thioredoxin [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 153.7 bits (387), Expect = 1.400e-33 Identity = 107/382 (28.01%), Postives = 175/382 (45.81%), Query Frame = 0 Query: 87 IEVDVKNF-VALLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMES--ILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLFL 466 IEVD +F ++ S +PV+LDCYA WC PCK L P+L+K VG+Y G+++L KLD DK+P+LA L++ SLP V + +GKLV FVG +E + FL ++ + AG + +G S E E + D ++ GN E + + E+ + ++ R L GL + AL G +A +V++L + +K ++ + AVSFAE +E G + +A E R++ A +R+E A++E L ++K+++ +++ AAK LLL+IFE LGP++++ K R+RM + L + Sbjct: 62 IEVDEASFGPKVMQSKLPVVLDCYADWCGPCKSLEPILKKAVGEYKGKLVLAKLDTDKNPQLAQALQIKSLPTVLAVYQGKLVHHFVGSQSEAQVKEFLQNVVK-MTGAGQPQPGEGGASAIEAAEGLMDQVDQALEAGNVANDEIVPVLKELADVQPNKDEKDREVKDRFEKVRVRALVGLGQLALKDGNVSDANALVKMLESSYKQHLQEPVVASFVRAVSFAETAGDVSSDELG----------DLEARRADLSSEERFKFAQSLVSQKRYEEAIDEAL-------------------------------------------------------TLLKKDRAFQDEAAKKLLLEIFELLGPKDDLVKAARRRMASILLV 377
BLAST of NO13G00670 vs. NCBI_GenBank
Match: PPR14031.1 (Thioredoxin C-1 [Alphaproteobacteria bacterium MarineAlpha12_Bin1]) HSP 1 Score: 151.0 bits (380), Expect = 9.200e-33 Identity = 113/361 (31.30%), Postives = 171/361 (47.37%), Query Frame = 0 Query: 104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 VI+D +A+WC PCK LTP+LE +V K G V L K+DVDK+P+L+AQL++ S+P VF G+ VD F G E + ++DK+L G + PS E L A+ M G+ GG AGAL+ QV + AE T A L+G+A+C L AE+AR+++ L + K+ + + V SA+ AEV G + + L L V + P+DL+ +Y LA+ + EAA+++ L+D I+K ++W +G A+ LLKIFEALGP + + GR+++++ LF Sbjct: 44 VIVDFWASWCGPCKTLTPILETVVNKAGGAVRLVKIDVDKNPDLSAQLRIQSIPTVFAFSNGQPVDAFQGALPESEVQNWIDKLLK-------QHGGEQEPSPLEEA---LMAAEEAMNNGDIGG---------AGALFAQVLNQ-DAENTNA-------LSGMAKCYLKANKAEKARELIDQLTDEVKSS-DEMRAVISAIELAEV---------GSASANELDSLMKKVSENPSDLQLKYNLAISLYGSGDTEAAIDQ-----------------------LVD--------------------------------IVKSSRDWNDGGAREQLLKIFEALGPTDPIAITGRRKLSSVLF 312
BLAST of NO13G00670 vs. NCBI_GenBank
Match: WP_011500882.1 (MULTISPECIES: thioredoxin [Rhodopseudomonas] >ABE37694.1 thioredoxin [Rhodopseudomonas palustris BisB5] >SEP36001.1 thioredoxin [Rhodopseudomonas pseudopalustris]) HSP 1 Score: 144.1 bits (362), Expect = 1.100e-30 Identity = 106/363 (29.20%), Postives = 172/363 (47.38%), Query Frame = 0 Query: 103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAE-RQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 PV++D +A WC PC++LTP+LEK V G+V L K+++D+HP + Q+ + S+PAV +G+ D F+G E +A F++K+ + +P GAPS AE QEA+ +A E D AT AGA+Y +V + AA +AGLARC + GA ++A+Q++ + +++ E ++ V + + AE Q P + +L+ V P D +AR+ LA A+N G RDE +L +I+KR+++W E A+ L+++FEA GP ++ T +GR+R++ LF Sbjct: 39 PVLIDFWAPWCGPCRQLTPMLEKAVRAAGGKVKLVKMNIDEHPSIPGQMGIQSIPAVIAFVDGRPADGFMGAVPESQVATFIEKLTAGVP--------GGAPSAAELLQEAEAVLA-------------EGDPAT-AGAIYAEVLQADAA--------NVEAMAGLARCYMQSGAVDQAKQLLDQV-PENRREDAAVKAVQAMIDLAEQAEQLGP----------IAELEQKVAADPLDHQARFDLA----------TALNAA------------GRRDEATAHLL---------------------------------EIVKRDRKWNEDGARKQLVQLFEAWGPTDDATVEGRKRLSTILF 305
BLAST of NO13G00670 vs. NCBI_GenBank
Match: PPD07398.1 (thioredoxin [Hyphomicrobium sp.]) HSP 1 Score: 141.7 bits (356), Expect = 5.600e-30 Identity = 113/361 (31.30%), Postives = 163/361 (45.15%), Query Frame = 0 Query: 104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 VI+D +A WC PCK+L PVLEK+V Y G+V L KLD D HP +AAQL+V SLP V+ +G+ +D FVG+ E +L F+D++L G D +D PSVA+ LA A+ G+ G A Y V +E ++T LAG+ARC L G E A Q++ L+ K + V +A++ A A L+ + K P D +ARY LA+ G K E LE LT I++R+++W E AA+ L+++FE GP++E T GR+R+++ LF Sbjct: 35 VIVDFWANWCGPCKQLAPVLEKVVKSYGGKVRLVKLDTDAHPSIAAQLRVQSLPTVYAFRDGRPLDGFVGVQPESMLRQFIDRLL------GDDAALDAGPSVAD----ILAAAEEAFDAGDLQG---------AAEAYSAVLQE---DQT-----NVDALAGVARCYLKSGDVERAEQMLSLV-PPDKEGAGPVQAVKAAIALAAKAAGA----------SETAALEAKLEKDPADHQARYDLAV-------------ALAATGHKGEA-------------------LEHLLT-----------------------IVRRDRKWNEEAARKQLVELFEVWGPKDEFTVDGRKRLSSILF 302
BLAST of NO13G00670 vs. NCBI_GenBank
Match: OYW55931.1 (thioredoxin [Hyphomicrobium sp. 12-62-95] >OYY01034.1 thioredoxin [Hyphomicrobium sp. 32-62-53]) HSP 1 Score: 141.4 bits (355), Expect = 7.300e-30 Identity = 113/361 (31.30%), Postives = 163/361 (45.15%), Query Frame = 0 Query: 104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 VI+D +A WC PCK+L PVLEK+V Y G+V L KLD D HP +AAQL+V SLP V+ +G+ +D FVG+ E +L F+D++L G D +D PSVA+ LA A+ G+ G A Y V +E ++T LAG+ARC L G E A Q++ L+ K + V +A++ A A L+ + K P D +ARY LA+ G K E LE LT I++R+++W E AA+ L+++FE GP++E T GR+R+++ LF Sbjct: 35 VIVDFWANWCGPCKQLAPVLEKVVKSYGGKVRLVKLDTDAHPSIAAQLRVQSLPTVYAFRDGRPLDGFVGVQPESMLRQFIDRLL------GDDAALDAGPSVAD----ILAAAEEAFDAGDLQG---------AAEAYSAVLQE---DKT-----NVDALAGVARCYLKSGDVERAEQMLSLV-PPDKEGAGPVQAVKAAIALAAKAAGA----------SETAALEAKLEKDPADHQARYDLAV-------------ALAATGHKGEA-------------------LEHLLT-----------------------IVRRDRKWNEEAARKQLVELFEVWGPKDEFTVDGRKRLSSILF 302
BLAST of NO13G00670 vs. NCBI_GenBank
Match: WP_106750653.1 (thioredoxin [Phreatobacter sp. S-12] >AVO47283.1 thioredoxin [Phreatobacter sp. S-12]) HSP 1 Score: 141.4 bits (355), Expect = 7.300e-30 Identity = 108/362 (29.83%), Postives = 171/362 (47.24%), Query Frame = 0 Query: 103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 PV++D +ATWC PCK+LTPVLEK+V + G+V L K+D+DKHPE+A QL + S+PAV +G+ +D F+G E + F+DK++ G +P VAE LA AD+ + G+ G A +Y QV L AE LAGLARCA+ G ++A+ I++ + + KA +S+ +A+ AE P + + + + + P D +AR+ LA+ A+N +G+R+E +L +I +R++ W E A+ L++ FEA GP +E T GR+++++ LF Sbjct: 65 PVLVDFWATWCGPCKQLTPVLEKVVQSFKGKVKLVKMDIDKHPEIAGQLGIQSIPAVIAFDKGQGIDGFMGALPESQVKAFIDKLV----------GGKVSPDVAE----ILAAADAALVDGDAAG---------AAQIYAQV---LGAEPE-----NLHALAGLARCAVETGDLDQAKAILEQV-SADKANDKSVAAARAALELAEQAADLGP----------IHEFEHKLAQNPADHQARFDLAV----------ALN------------AQGKREEATDHLL---------------------------------EIFRRDRTWNEDGARKQLVQFFEAWGPMDEATLAGRRKLSSLLF 329
BLAST of NO13G00670 vs. NCBI_GenBank
Match: EJY79260.1 (Thioredoxin family protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 140.2 bits (352), Expect = 1.600e-29 Identity = 106/373 (28.42%), Postives = 168/373 (45.04%), Query Frame = 0 Query: 97 LLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGA-AEEARQIVQLLRTKHKAEMESILEVASAVSFAEV----VMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 ++ S PVILDCYA WC PCKKLTP+LE + G+ L KL++D P++A LKV ++PAVF + +G ++D FVG+P+E L F+D + + S+A + + D + NN E +K G Y+ ++ P LQ G+A C ++ +++++I+ + K E+ + A + AE+ QAP EE + ++K++ D P+D+++RY LA F+ Q++E A+ CL Q + ++ W E AA LLLK+FE LG NEVT K R+R++ LF Sbjct: 82 VMQSDKPVILDCYAEWCGPCKKLTPLLEDLTASAEGKFKLVKLNIDNLPQIATGLKVRNIPAVFLIHKGNVIDTFVGLPSEQQLKQFIDTAILV-------------DSIAHDENIMQTILDKAEEFINNNELENAEKIFMEGYTYENWRDKF------GPRLQ----VGIAYCFVINHRDIKKSQEILDQITEPKKKELPEFYKDLLAKTLAEINNLQKNQAPSEE----EQQLIQKIEND----PSDMQSRYDLAKLQFESQKYEDALESCL-------------------------------------------------------QSMSIQRNWNERAAYQLLLKVFEKLGSSNEVTIKARKRLSKILF 368
BLAST of NO13G00670 vs. NCBI_GenBank
Match: XP_004351513.1 (thioredoxin domain containing protein [Acanthamoeba castellanii str. Neff] >ELR22736.1 thioredoxin domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 139.8 bits (351), Expect = 2.100e-29 Identity = 122/404 (30.20%), Postives = 175/404 (43.32%), Query Frame = 0 Query: 85 SIIEVDVKNFV--ALLNSPVPVIL-DCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPEL---------------AAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGG------LSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465 +I EV+ NF+ A+ S V+L DCYA WC PCK+L P+LE V GR+ L KL+VD +P L A Q++V+SLP V L K+VD FVG+ L F++ +L PA E + ++ E EA+LA D +A A + Q E+ E T Y AGLARCAL + A+ +V+ L+ K+KA++ V A++ E+ + + GG V + KLQ D D +ARY LA F + E A+++ L+ +IKR+K W + AA+ L+LKIF ALGP NE+T K R+R + F Sbjct: 95 NIYEVNEANFLKEAIEASDKRVVLIDCYADWCAPCKQLAPLLEAAVRNSGGRLALAKLNVDNNPTLSRQIAVSCAMDLISDALQMQVTSLPTVMALSGRKVVDSFVGLLKPAELTKFVEGLLQDFAPAAPAEEAETGGNLLEEAEAELAKGD----------------VNQAAAKFSQALEK-DKECTHLVY------AGLARCALAENNLQAAQHLVKELKDKYKAKLND-PAVGKAIAAVELRAELADKSGGSAQDLEAKVTEWRAKLQADA----NDHQARYDLAHALFSTGQTEEALDQILD-------------------------------------------------------LIKRDKHWNDEAARKLMLKIFSALGPNNELTTKARKRFASIWF 415
BLAST of NO13G00670 vs. NCBI_GenBank
Match: XP_005790256.1 (thioredoxin [Emiliania huxleyi CCMP1516] >EOD37827.1 thioredoxin [Emiliania huxleyi CCMP1516]) HSP 1 Score: 138.3 bits (347), Expect = 6.200e-29 Identity = 114/361 (31.58%), Postives = 163/361 (45.15%), Query Frame = 0 Query: 103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYL 464 PVILD YA WC PCK+LTP LE +V G V L K++VD PE+A L+V+SLP V L GK+VD F G+ + + F+DK +++ G P + + + A A L++GG+ A A Y AE P L A AGLA CAL A+ +V L H A++E+ V A++ + + AP EGG V + L+ D D ARY+LA + A++E L I++R+K W +GAA+ LLLK+F+ALG +E+TKKGR+R++N+L Sbjct: 80 PVILDFYADWCGPCKQLTPKLEALVTAAGGTVRLAKVNVDNLPEIAQALQVASLPTVMLLHGGKIVDSFKGVLPDDKVKEFVDKAVALA----------GGPDASGPKALEEAAA--LLEGGD---------IPAAAAKY--------AEICALPELAAAAKAGLALCALQDDQLSAAQDLVADLTKNHAADLEA-PPVRKAIAAVALAVDAP--EGGRPVSELRLALEAD----RDDHAARYELAQRLLVSGEQADAIDELL-------------------------------------------------------LIVRRDKAWSDGAARLLLLKVFDALGSGHELTKKGRRRLSNFL 349 The following BLAST results are available for this feature:
BLAST of NO13G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00670 ID=NO13G00670|Name=NO13G00670|organism=Nannochloropsis oceanica|type=gene|length=1795bpback to top protein sequence of NO13G00670.2 >NO13G00670.2-protein ID=NO13G00670.2-protein|Name=NO13G00670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=466bpback to top protein sequence of NO13G00670.1 >NO13G00670.1-protein ID=NO13G00670.1-protein|Name=NO13G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bpback to top Synonyms
Publications
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