NO13G00670, NO13G00670 (gene) Nannochloropsis oceanica

Overview
NameNO13G00670
Unique NameNO13G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1795
Alignment locationchr13:226303..228097 -

Link to JBrowse

Properties
Property NameValue
DescriptionThioredoxin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:226303..228097 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0019725cellular homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
BLAST of NO13G00670 vs. NCBI_GenBank
Match: EWM21739.1 (thioredoxin [Nannochloropsis gaditana] >EWM21740.1 thioredoxin [Nannochloropsis gaditana])

HSP 1 Score: 317.8 bits (813), Expect = 5.700e-83
Identity = 164/219 (74.89%), Postives = 186/219 (84.93%), Query Frame = 0
Query:   81 ARAPSIIEVDVKNFVALLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLM-KGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESI 299
            AR PS+IEVDVKNFVALL SPVPVILDCYA+WCDPCKKLTPVLE+IVGKYPGR+IL KLDVD H ELAAQL VSSLPAVFGLCEGKLVDRFVGMPTEP+LAGFLDKMLSIIP +   EG  G PS AE+QEA L  AD+L+ +G   GG  E   AT+AGALY+QVYEEL  E+TPA YLQARCLAGLARCAL GGA EEA+++V +L+ +HKA+ME++
Sbjct:  119 ARMPSVIEVDVKNFVALLKSPVPVILDCYASWCDPCKKLTPVLERIVGKYPGRLILAKLDVDNHQELAAQLNVSSLPAVFGLCEGKLVDRFVGMPTEPVLAGFLDKMLSIIPTSSGQEG-KGEPSPAEKQEAVLKRADALLTEGTKEGGSGE--TATEAGALYRQVYEELGKEDTPATYLQARCLAGLARCALRGGAREEAKELVGMLKRQHKADMETM 334          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: GBG25366.1 (Thioredoxin [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 153.7 bits (387), Expect = 1.400e-33
Identity = 107/382 (28.01%), Postives = 175/382 (45.81%), Query Frame = 0
Query:   87 IEVDVKNF-VALLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMES--ILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLFL 466
            IEVD  +F   ++ S +PV+LDCYA WC PCK L P+L+K VG+Y G+++L KLD DK+P+LA  L++ SLP V  + +GKLV  FVG  +E  +  FL  ++  +  AG  +  +G  S  E  E  +   D  ++ GN    E      +   +     E+    +     ++ R L GL + AL  G   +A  +V++L + +K  ++   +     AVSFAE       +E G            +  +A    E R++ A      +R+E A++E L                                                        ++K+++ +++ AAK LLL+IFE LGP++++ K  R+RM + L +
Sbjct:   62 IEVDEASFGPKVMQSKLPVVLDCYADWCGPCKSLEPILKKAVGEYKGKLVLAKLDTDKNPQLAQALQIKSLPTVLAVYQGKLVHHFVGSQSEAQVKEFLQNVVK-MTGAGQPQPGEGGASAIEAAEGLMDQVDQALEAGNVANDEIVPVLKELADVQPNKDEKDREVKDRFEKVRVRALVGLGQLALKDGNVSDANALVKMLESSYKQHLQEPVVASFVRAVSFAETAGDVSSDELG----------DLEARRADLSSEERFKFAQSLVSQKRYEEAIDEAL-------------------------------------------------------TLLKKDRAFQDEAAKKLLLEIFELLGPKDDLVKAARRRMASILLV 377          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: PPR14031.1 (Thioredoxin C-1 [Alphaproteobacteria bacterium MarineAlpha12_Bin1])

HSP 1 Score: 151.0 bits (380), Expect = 9.200e-33
Identity = 113/361 (31.30%), Postives = 171/361 (47.37%), Query Frame = 0
Query:  104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            VI+D +A+WC PCK LTP+LE +V K  G V L K+DVDK+P+L+AQL++ S+P VF    G+ VD F G   E  +  ++DK+L          G +  PS  E     L  A+  M  G+ GG         AGAL+ QV  +  AE T A       L+G+A+C L    AE+AR+++  L  + K+  + +  V SA+  AEV         G +  + L  L   V + P+DL+ +Y LA+  +     EAA+++                       L+D                                I+K  ++W +G A+  LLKIFEALGP + +   GR+++++ LF
Sbjct:   44 VIVDFWASWCGPCKTLTPILETVVNKAGGAVRLVKIDVDKNPDLSAQLRIQSIPTVFAFSNGQPVDAFQGALPESEVQNWIDKLLK-------QHGGEQEPSPLEEA---LMAAEEAMNNGDIGG---------AGALFAQVLNQ-DAENTNA-------LSGMAKCYLKANKAEKARELIDQLTDEVKSS-DEMRAVISAIELAEV---------GSASANELDSLMKKVSENPSDLQLKYNLAISLYGSGDTEAAIDQ-----------------------LVD--------------------------------IVKSSRDWNDGGAREQLLKIFEALGPTDPIAITGRRKLSSVLF 312          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: WP_011500882.1 (MULTISPECIES: thioredoxin [Rhodopseudomonas] >ABE37694.1 thioredoxin [Rhodopseudomonas palustris BisB5] >SEP36001.1 thioredoxin [Rhodopseudomonas pseudopalustris])

HSP 1 Score: 144.1 bits (362), Expect = 1.100e-30
Identity = 106/363 (29.20%), Postives = 172/363 (47.38%), Query Frame = 0
Query:  103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAE-RQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            PV++D +A WC PC++LTP+LEK V    G+V L K+++D+HP +  Q+ + S+PAV    +G+  D F+G   E  +A F++K+ + +P         GAPS AE  QEA+  +A             E D AT AGA+Y +V +  AA            +AGLARC +  GA ++A+Q++  +  +++ E  ++  V + +  AE   Q  P          + +L+  V   P D +AR+ LA           A+N              G RDE    +L                                 +I+KR+++W E  A+  L+++FEA GP ++ T +GR+R++  LF
Sbjct:   39 PVLIDFWAPWCGPCRQLTPMLEKAVRAAGGKVKLVKMNIDEHPSIPGQMGIQSIPAVIAFVDGRPADGFMGAVPESQVATFIEKLTAGVP--------GGAPSAAELLQEAEAVLA-------------EGDPAT-AGAIYAEVLQADAA--------NVEAMAGLARCYMQSGAVDQAKQLLDQV-PENRREDAAVKAVQAMIDLAEQAEQLGP----------IAELEQKVAADPLDHQARFDLA----------TALNAA------------GRRDEATAHLL---------------------------------EIVKRDRKWNEDGARKQLVQLFEAWGPTDDATVEGRKRLSTILF 305          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: PPD07398.1 (thioredoxin [Hyphomicrobium sp.])

HSP 1 Score: 141.7 bits (356), Expect = 5.600e-30
Identity = 113/361 (31.30%), Postives = 163/361 (45.15%), Query Frame = 0
Query:  104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            VI+D +A WC PCK+L PVLEK+V  Y G+V L KLD D HP +AAQL+V SLP V+   +G+ +D FVG+  E +L  F+D++L      G D  +D  PSVA+     LA A+     G+  G         A   Y  V +E   ++T         LAG+ARC L  G  E A Q++ L+    K     +  V +A++ A     A               L+  + K P D +ARY LA+                  G K E                    LE  LT                       I++R+++W E AA+  L+++FE  GP++E T  GR+R+++ LF
Sbjct:   35 VIVDFWANWCGPCKQLAPVLEKVVKSYGGKVRLVKLDTDAHPSIAAQLRVQSLPTVYAFRDGRPLDGFVGVQPESMLRQFIDRLL------GDDAALDAGPSVAD----ILAAAEEAFDAGDLQG---------AAEAYSAVLQE---DQT-----NVDALAGVARCYLKSGDVERAEQMLSLV-PPDKEGAGPVQAVKAAIALAAKAAGA----------SETAALEAKLEKDPADHQARYDLAV-------------ALAATGHKGEA-------------------LEHLLT-----------------------IVRRDRKWNEEAARKQLVELFEVWGPKDEFTVDGRKRLSSILF 302          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: OYW55931.1 (thioredoxin [Hyphomicrobium sp. 12-62-95] >OYY01034.1 thioredoxin [Hyphomicrobium sp. 32-62-53])

HSP 1 Score: 141.4 bits (355), Expect = 7.300e-30
Identity = 113/361 (31.30%), Postives = 163/361 (45.15%), Query Frame = 0
Query:  104 VILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            VI+D +A WC PCK+L PVLEK+V  Y G+V L KLD D HP +AAQL+V SLP V+   +G+ +D FVG+  E +L  F+D++L      G D  +D  PSVA+     LA A+     G+  G         A   Y  V +E   ++T         LAG+ARC L  G  E A Q++ L+    K     +  V +A++ A     A               L+  + K P D +ARY LA+                  G K E                    LE  LT                       I++R+++W E AA+  L+++FE  GP++E T  GR+R+++ LF
Sbjct:   35 VIVDFWANWCGPCKQLAPVLEKVVKSYGGKVRLVKLDTDAHPSIAAQLRVQSLPTVYAFRDGRPLDGFVGVQPESMLRQFIDRLL------GDDAALDAGPSVAD----ILAAAEEAFDAGDLQG---------AAEAYSAVLQE---DKT-----NVDALAGVARCYLKSGDVERAEQMLSLV-PPDKEGAGPVQAVKAAIALAAKAAGA----------SETAALEAKLEKDPADHQARYDLAV-------------ALAATGHKGEA-------------------LEHLLT-----------------------IVRRDRKWNEEAARKQLVELFEVWGPKDEFTVDGRKRLSSILF 302          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: WP_106750653.1 (thioredoxin [Phreatobacter sp. S-12] >AVO47283.1 thioredoxin [Phreatobacter sp. S-12])

HSP 1 Score: 141.4 bits (355), Expect = 7.300e-30
Identity = 108/362 (29.83%), Postives = 171/362 (47.24%), Query Frame = 0
Query:  103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            PV++D +ATWC PCK+LTPVLEK+V  + G+V L K+D+DKHPE+A QL + S+PAV    +G+ +D F+G   E  +  F+DK++          G   +P VAE     LA AD+ +  G+  G         A  +Y QV   L AE           LAGLARCA+  G  ++A+ I++ + +  KA  +S+    +A+  AE      P          + + +  + + P D +AR+ LA+          A+N             +G+R+E    +L                                 +I +R++ W E  A+  L++ FEA GP +E T  GR+++++ LF
Sbjct:   65 PVLVDFWATWCGPCKQLTPVLEKVVQSFKGKVKLVKMDIDKHPEIAGQLGIQSIPAVIAFDKGQGIDGFMGALPESQVKAFIDKLV----------GGKVSPDVAE----ILAAADAALVDGDAAG---------AAQIYAQV---LGAEPE-----NLHALAGLARCAVETGDLDQAKAILEQV-SADKANDKSVAAARAALELAEQAADLGP----------IHEFEHKLAQNPADHQARFDLAV----------ALN------------AQGKREEATDHLL---------------------------------EIFRRDRTWNEDGARKQLVQFFEAWGPMDEATLAGRRKLSSLLF 329          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: EJY79260.1 (Thioredoxin family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 140.2 bits (352), Expect = 1.600e-29
Identity = 106/373 (28.42%), Postives = 168/373 (45.04%), Query Frame = 0
Query:   97 LLNSPVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGA-AEEARQIVQLLRTKHKAEMESILEVASAVSFAEV----VMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            ++ S  PVILDCYA WC PCKKLTP+LE +     G+  L KL++D  P++A  LKV ++PAVF + +G ++D FVG+P+E  L  F+D  + +              S+A  +     + D   +  NN   E  +K    G  Y+   ++        P LQ     G+A C ++     +++++I+  +    K E+    +   A + AE+      QAP EE     +  ++K++ D    P+D+++RY LA   F+ Q++E A+  CL                                                       Q +  ++ W E AA  LLLK+FE LG  NEVT K R+R++  LF
Sbjct:   82 VMQSDKPVILDCYAEWCGPCKKLTPLLEDLTASAEGKFKLVKLNIDNLPQIATGLKVRNIPAVFLIHKGNVIDTFVGLPSEQQLKQFIDTAILV-------------DSIAHDENIMQTILDKAEEFINNNELENAEKIFMEGYTYENWRDKF------GPRLQ----VGIAYCFVINHRDIKKSQEILDQITEPKKKELPEFYKDLLAKTLAEINNLQKNQAPSEE----EQQLIQKIEND----PSDMQSRYDLAKLQFESQKYEDALESCL-------------------------------------------------------QSMSIQRNWNERAAYQLLLKVFEKLGSSNEVTIKARKRLSKILF 368          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: XP_004351513.1 (thioredoxin domain containing protein [Acanthamoeba castellanii str. Neff] >ELR22736.1 thioredoxin domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 139.8 bits (351), Expect = 2.100e-29
Identity = 122/404 (30.20%), Postives = 175/404 (43.32%), Query Frame = 0
Query:   85 SIIEVDVKNFV--ALLNSPVPVIL-DCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPEL---------------AAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGG------LSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYLF 465
            +I EV+  NF+  A+  S   V+L DCYA WC PCK+L P+LE  V    GR+ L KL+VD +P L               A Q++V+SLP V  L   K+VD FVG+     L  F++ +L    PA   E  +   ++ E  EA+LA  D                  +A A + Q  E+   E T   Y      AGLARCAL     + A+ +V+ L+ K+KA++     V  A++  E+  +   + GG        V +   KLQ D      D +ARY LA   F   + E A+++ L+                                                       +IKR+K W + AA+ L+LKIF ALGP NE+T K R+R  +  F
Sbjct:   95 NIYEVNEANFLKEAIEASDKRVVLIDCYADWCAPCKQLAPLLEAAVRNSGGRLALAKLNVDNNPTLSRQIAVSCAMDLISDALQMQVTSLPTVMALSGRKVVDSFVGLLKPAELTKFVEGLLQDFAPAAPAEEAETGGNLLEEAEAELAKGD----------------VNQAAAKFSQALEK-DKECTHLVY------AGLARCALAENNLQAAQHLVKELKDKYKAKLND-PAVGKAIAAVELRAELADKSGGSAQDLEAKVTEWRAKLQADA----NDHQARYDLAHALFSTGQTEEALDQILD-------------------------------------------------------LIKRDKHWNDEAARKLMLKIFSALGPNNELTTKARKRFASIWF 415          
BLAST of NO13G00670 vs. NCBI_GenBank
Match: XP_005790256.1 (thioredoxin [Emiliania huxleyi CCMP1516] >EOD37827.1 thioredoxin [Emiliania huxleyi CCMP1516])

HSP 1 Score: 138.3 bits (347), Expect = 6.200e-29
Identity = 114/361 (31.58%), Postives = 163/361 (45.15%), Query Frame = 0
Query:  103 PVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQLKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGVDGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELAAEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILEVASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALKCFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTENWTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKGRQRMTNYL 464
            PVILD YA WC PCK+LTP LE +V    G V L K++VD  PE+A  L+V+SLP V  L  GK+VD F G+  +  +  F+DK +++           G P  +  +  + A A  L++GG+            A A Y        AE    P L A   AGLA CAL       A+ +V  L   H A++E+   V  A++   + + AP  EGG  V +    L+ D      D  ARY+LA +         A++E L                                                        I++R+K W +GAA+ LLLK+F+ALG  +E+TKKGR+R++N+L
Sbjct:   80 PVILDFYADWCGPCKQLTPKLEALVTAAGGTVRLAKVNVDNLPEIAQALQVASLPTVMLLHGGKIVDSFKGVLPDDKVKEFVDKAVALA----------GGPDASGPKALEEAAA--LLEGGD---------IPAAAAKY--------AEICALPELAAAAKAGLALCALQDDQLSAAQDLVADLTKNHAADLEA-PPVRKAIAAVALAVDAP--EGGRPVSELRLALEAD----RDDHAARYELAQRLLVSGEQADAIDELL-------------------------------------------------------LIVRRDKAWSDGAARLLLLKVFDALGSGHELTKKGRRRLSNFL 349          
The following BLAST results are available for this feature:
BLAST of NO13G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21739.15.700e-8374.89thioredoxin [Nannochloropsis gaditana] >EWM21740.1... [more]
GBG25366.11.400e-3328.01Thioredoxin [Aurantiochytrium sp. FCC1311][more]
PPR14031.19.200e-3331.30Thioredoxin C-1 [Alphaproteobacteria bacterium Mar... [more]
WP_011500882.11.100e-3029.20MULTISPECIES: thioredoxin [Rhodopseudomonas] >ABE3... [more]
PPD07398.15.600e-3031.30thioredoxin [Hyphomicrobium sp.][more]
OYW55931.17.300e-3031.30thioredoxin [Hyphomicrobium sp. 12-62-95] >OYY0103... [more]
WP_106750653.17.300e-3029.83thioredoxin [Phreatobacter sp. S-12] >AVO47283.1 t... [more]
EJY79260.11.600e-2928.42Thioredoxin family protein (macronuclear) [Oxytric... [more]
XP_004351513.12.100e-2930.20thioredoxin domain containing protein [Acanthamoeb... [more]
XP_005790256.16.200e-2931.58thioredoxin [Emiliania huxleyi CCMP1516] >EOD37827... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001831NSK001831Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00670.2NO13G00670.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G00670.1NO13G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596877gene_6947Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100270g7gene8692Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00670.2NO13G00670.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G00670.1NO13G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00670 ID=NO13G00670|Name=NO13G00670|organism=Nannochloropsis oceanica|type=gene|length=1795bp
AAACGCTCTTCTTACCGTCAGACAGGCCGCCATGTACCGTCGCTTGTTGT
CTGACAACACGCGCAGGAGGATTACCGATGTCTCCCTACGCTATCGATCC
GCCCCACCTCCTTTGCCCCTCGTATGCTGCCGGGGCGCAGCCTCCTCCAA
ACCACCCCCCTCCGGCCGTCTACCCAGCACAGGCAACGGGCTGATAGGCA
TGCCCCCTCCTCCCCGTTCCCCACCCTCTACAGTAAAGTCCAAGCCCAAG
ATATCCCCTCCAGCGGCGGCCGCACGCGCGCCATCAATCATCGAGGTGGA
CGTCAAAAATTTTGTGGCCTTACTCAACTCCCCCGTGCCCGTCATCCTGG
ACTGTTACGCCACTTGGTGCGACCCTTGCAAGAAGCTCACTCCGGTGCTG
GAGAAAATCGTGGGGAAGTATCCAGGTAGGGTTATTCTCGGAAAACTCGA
CGTGGACAAGCACCCAGAGCTGGCAGCGCAACTGAAAGTCAGCTCTCTCC
CGGCCGTCTTCGGTCTCTGCGAGGGCAAGCTAGTCGATCGATTCGTAGGC
ATGCCCACCGAGCCCATTCTGGCGGGATTCCTGGACAAGATGCTCTCCAT
CATTCCACCTGCAGGCACCGATGAGGGAGTGGATGGAGCGCCTTCCGTGG
CGGAGAGACAGGAGGCTGATCTGGCCATGGCCGATAGTTTGATGAAAGGA
GGAAACAATGGGGGGAAAGAGGAGAAGGACAAGGCCACCAAAGCGGGTGC
GTTGTATAAACAAGTGTATGAGGAACTGGCAGCAGAGGAAACACCAGCGC
CTTATTTGCAGGCGCGATGCTTGGCGGGTTTGGCGCGGTGTGCATTGATG
GGAGGAGCAGCGGAGGAGGCGAGGCAAATTGTGCAACTACTGAGGACGAA
GCACAAGGCGGAGATGGAGAGTATACTGgtaagagaaaggaagggaagga
caggggaaagaagaagtcctgttgagatgctgatgcacgacttctcgtct
atattccgccctgcatttcccgtaacagGAGGTTGCCAGTGCCGTCTCTT
TCGCGGAAGTGGTTATGCAGGCGCCGCCAGAGGAAGGAGGGCTCTCAGTA
GAGGACACATTAAAGAAGCTGCAGGGGGATGTACTTAAGGCACCGACTGA
TCTGGAGGCCCGGTATCAGCTGGCGTTGAAGTGCTTCCAGCTGCAACGGT
TCGAGGCAGCGATGAATGAGTGCTTGGAGgtgggaagtaaaagggaggga
tggagggagggggagagagatgaggataaaaggaggattttaatagatta
ttttcatttagaaacatatttgactgaaaattggacaatttgtcatcttg
aaatattctcattcttgtcaccctctccccctccacctacacagATCATC
AAGCGCGAGAAGGAGTGGAAGGAAGGGGCTGCCAAAGCCTTGCTACTCAA
GATTTTTGAGGCCTTGGGCCCACAAAACGAAGTGACCAAGAAAGGACGGC
AACGCATGACGAATTACCTTTTTTTGTAGATCCGGTTATAGGTGAAGAGG
ATGCTTGTCCTTCCAACCCCCTCCTCCTGTCTCCTCCTTCTTTTACTCCC
AGGCCTTCGCCTTTCTGCGCCGGAAGAATTTCATCAAAGAAGTATTTGCT
CTTTCAAGATAACCAAGTGCGAGACATGCCTAGTACCAACAAAAATAGAA
ATGAAGACGATGAGGAGAACGAGCAAGAGAGGAGAAATACAAAGAGGCCG
TGGGACAAAAAGTAACAACCACATGTACAATGGAAAGAACAATGT
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protein sequence of NO13G00670.2

>NO13G00670.2-protein ID=NO13G00670.2-protein|Name=NO13G00670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=466bp
MYRRLLSDNTRRRITDVSLRYRSAPPPLPLVCCRGAASSKPPPSGRLPST
GNGLIGMPPPPRSPPSTVKSKPKISPPAAAARAPSIIEVDVKNFVALLNS
PVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQ
LKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGV
DGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELA
AEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILE
VASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALK
CFQLQRFEAAMNECLEVGSKREGWREGERDEDKRRILIDYFHLETYLTEN
WTICHLEIFSFLSPSPPPPTQIIKREKEWKEGAAKALLLKIFEALGPQNE
VTKKGRQRMTNYLFL*
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protein sequence of NO13G00670.1

>NO13G00670.1-protein ID=NO13G00670.1-protein|Name=NO13G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MYRRLLSDNTRRRITDVSLRYRSAPPPLPLVCCRGAASSKPPPSGRLPST
GNGLIGMPPPPRSPPSTVKSKPKISPPAAAARAPSIIEVDVKNFVALLNS
PVPVILDCYATWCDPCKKLTPVLEKIVGKYPGRVILGKLDVDKHPELAAQ
LKVSSLPAVFGLCEGKLVDRFVGMPTEPILAGFLDKMLSIIPPAGTDEGV
DGAPSVAERQEADLAMADSLMKGGNNGGKEEKDKATKAGALYKQVYEELA
AEETPAPYLQARCLAGLARCALMGGAAEEARQIVQLLRTKHKAEMESILE
VASAVSFAEVVMQAPPEEGGLSVEDTLKKLQGDVLKAPTDLEARYQLALK
CFQLQRFEAAMNECLEIIKREKEWKEGAAKALLLKIFEALGPQNEVTKKG
RQRMTNYLFL*
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Synonyms
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