NO13G00660, NO13G00660 (gene) Nannochloropsis oceanica

Overview
NameNO13G00660
Unique NameNO13G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length856
Alignment locationchr13:225434..226289 -

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Properties
Property NameValue
DescriptionCathepsin l-like proteinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:225434..226289 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin
IPR009327Cupin_DUF985
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_017319077.1 (cupin domain-containing protein [Mastigocladopsis repens])

HSP 1 Score: 120.2 bits (300), Expect = 5.800e-24
Identity = 64/132 (48.48%), Postives = 80/132 (60.61%), Query Frame = 0
Query:   11 EIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQE 143
            ++++ L L  H EGG+F ETYRS       K  TD  GT           R++ TSI+Y+LT   PIGY+H NKSNIIHY+  G PL+Y +LHP+ G   K  LG D+ KG   QL V GG WKATVLE+ E
Sbjct:    5 DLIEKLSLVEHIEGGYFSETYRSDL-----KIATDREGT----------ERSLLTSIYYMLTDNRPIGYFHKNKSNIIHYFHAGSPLTYLILHPN-GELNKLKLGFDVTKGHLFQLKVPGGCWKATVLEEGE 120          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_104427368.1 (cupin domain-containing protein [Methylobacter tundripaludum] >PPK77972.1 hypothetical protein B0F87_101354 [Methylobacter tundripaludum])

HSP 1 Score: 119.0 bits (297), Expect = 1.300e-23
Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = 0
Query:   10 QEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQE 143
            ++++  L L PH EGG+F  TY S            +    +P+ S    PR + +SIFY+LT ++PIG+ H NKS+IIHY+ GG PL+Y +L+P  G  E  VLG DL KGQ LQLIV GG WKAT LE  E
Sbjct:    4 RQLIDKLSLAPHIEGGYFSRTYSS------------DLKADIPADS---KPRCLLSSIFYMLTDDSPIGHLHKNKSDIIHYFHGGSPLTYLILYPD-GTLETKVLGADLDKGQQLQLIVRGGCWKATELETGE 120          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_087505341.1 (cupin domain-containing protein [Neiella marina])

HSP 1 Score: 118.6 bits (296), Expect = 1.700e-23
Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 0
Query:    8 SAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVL 139
            +AQ+I+  L L  H EGG+F+ TY++         +T E G+           R + TSIFYLLT++APIG++H+N+S+I+H+YQGGDP+ Y L+ P  G  E+ VLG DLA GQ LQL V GG+WK++ L
Sbjct:   25 TAQQIIDGLQLQAHVEGGYFRRTYQA----DHRDKITTEHGS-----------RYLLTSIFYLLTADAPIGHFHLNRSDILHFYQGGDPIRYTLIKPD-GGLEQVVLGSDLAAGQQLQLTVKGGIWKSSEL 139          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: XP_002503593.1 (predicted protein [Micromonas commoda] >ACO64851.1 predicted protein [Micromonas commoda])

HSP 1 Score: 117.5 bits (293), Expect = 3.800e-23
Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 0
Query:   10 QEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQEE 144
            +E +  LG+ PHPEGGFF ETYRSG+ P  S+GLTD+ G L+ ++  P   RN+ TSI+Y+LT+E P   W  N S+ +HY+  G  L Y L+ P  G + +  LG ++A G   QL+V GG  K+  LE   E
Sbjct:   57 EEFISQLGMIPHPEGGFFVETYRSGSVPMTSRGLTDKDGELMTTNRGPTPERNVMTSIYYMLTAERPHQDWVNNMSDHVHYHHAGGTLIYNLVLPD-GTFVERRLGTNVAAGDEPQLVVKGGTLKSVRLEAGAE 189          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_103654369.1 (cupin domain-containing protein [Agarilytica rhodophyticola])

HSP 1 Score: 117.1 bits (292), Expect = 4.900e-23
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0
Query:    9 AQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQEE 144
            A+ ++ LL L  H EGG+FK+T+           + D    +      P   R   TSI+YLLT E+P G++H+NKS+I+HY+ GG P+ YF + P  G  E+HVLGPD++ G +LQLIV GG WKA  L  +E+
Sbjct:   32 AKGVIALLDLEAHIEGGYFKQTF-----------IADHRSKI----KTPNGERFTMTSIYYLLTDESPKGHFHINKSDIVHYFHGGKPIEYFFITPD-GKLERHVLGPDISSGHSLQLIVPGGYWKAARLMSEED 150          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_044057706.1 (cupin domain-containing protein [Alteromonas australica] >AIF99633.1 purine nucleoside permease [Alteromonas australica])

HSP 1 Score: 116.7 bits (291), Expect = 6.400e-23
Identity = 55/134 (41.04%), Postives = 85/134 (63.43%), Query Frame = 0
Query:    8 SAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQ 142
            +A +++  L L  H EGG+FK+T+++   P  S    D               R   TSI+YLLT E+PIG++HMN+S+I+HY+  GDP++Y+L++   G+ E H+LGPD  +G  LQ++V GG WKA+V+ Q+
Sbjct:    3 TANQLINALELEGHVEGGYFKQTFKADHRPMLSTSHGD---------------RVTMTSIYYLLTGESPIGHFHMNQSDIMHYFHMGDPITYYLIN-EDGSLETHILGPDPTQGHKLQMVVKGGTWKASVIPQK 120          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_018956225.1 (cupin domain-containing protein [Streptomyces sp. CNB091])

HSP 1 Score: 116.3 bits (290), Expect = 8.400e-23
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    8 SAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLE 140
            +AQ+ +  LGL PH EGG+F+ T+++                  P    P   R + TSI YLLT E+PIGYWH+N+S+I+H++  G PL+Y L+HP  G  E  +LG D  +GQ L L V GGVWKAT L+
Sbjct:    3 TAQQWIDALGLEPHVEGGYFRRTFQADHR---------------PLVRTPRGERPLLTSIHYLLTEESPIGYWHLNRSDILHFHHSGAPLTYHLIHPD-GRAESVLLGQDPHQGQALTLAVPGGVWKATSLD 118          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_095878306.1 (cupin domain-containing protein [Streptomyces sp. TLI_235] >PBC67500.1 hypothetical protein BX265_8107 [Streptomyces sp. TLI_235])

HSP 1 Score: 116.3 bits (290), Expect = 8.400e-23
Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    8 SAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVL 139
            +AQ+ +  LGL PH EGG+F+ TY++   P                   P   R   TSI YLLT  +PIG+WH+N+S+I+H++  GDP++Y LLHP  G  E  VLG D  +GQ L L V GGVWKA+ L
Sbjct:    3 TAQQWIDALGLEPHVEGGYFRRTYQADHRPPV---------------PTPAGDRYAVTSIHYLLTGRSPIGHWHLNRSDILHFHHHGDPITYHLLHPD-GRHESAVLGQDPGRGQLLTLAVPGGVWKASHL 117          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: XP_003055539.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60791.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 115.2 bits (287), Expect = 1.900e-22
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 0
Query:    8 SAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQ 141
            S +E++  LGL PHPEGGFF ETYRSG  P ASKGLTD  G ++ ++  P   RN+ TSI+Y+LT E     W +N S+ +HY+  G    Y ++ P+ G +     G  +A G   Q++V GG +KA  LE+
Sbjct:   19 SKEELIANLGLIPHPEGGFFCETYRSGCAPMASKGLTDLMGNMMTTTRGPTPERNVMTSIYYMLTPEHDFQAWVVNASDHVHYHHAGGTFVYHIVSPN-GTYYTRRCGGCVANGDEPQVVVPGGSFKAVRLEE 150          
BLAST of NO13G00660 vs. NCBI_GenBank
Match: WP_005959939.1 (MULTISPECIES: cupin domain-containing protein [sulfur-oxidizing symbionts] >EGV52044.1 cupin family protein [endosymbiont of Riftia pachyptila (vent Ph05)] >EGW55829.1 cupin family protein [endosymbiont of Tevnia jerichonana (vent Tica)])

HSP 1 Score: 115.2 bits (287), Expect = 1.900e-22
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0
Query:   10 QEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTLLPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYFLLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVL 139
            QEI+  LGL PH EGG+F+ +Y+S                       P  PR+  TSI+YLLT +AP+G+ H N+SNI+HY+  G PL Y L+ P  G  E+ ++G +++ GQT QLIV+GG WKA+ L
Sbjct:    4 QEIIDALGLEPHLEGGYFRRSYQSAG-----------------EIQTPNGPRHRLTSIYYLLTDDAPVGHLHRNRSNILHYFHAGAPLRYTLIQPD-GRLEQRIMGTEVSAGQTPQLIVEGGCWKASEL 114          
The following BLAST results are available for this feature:
BLAST of NO13G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_017319077.15.800e-2448.48cupin domain-containing protein [Mastigocladopsis ... [more]
WP_104427368.11.300e-2347.37cupin domain-containing protein [Methylobacter tun... [more]
WP_087505341.11.700e-2346.56cupin domain-containing protein [Neiella marina][more]
XP_002503593.13.800e-2344.78predicted protein [Micromonas commoda] >ACO64851.1... [more]
WP_103654369.14.900e-2342.96cupin domain-containing protein [Agarilytica rhodo... [more]
WP_044057706.16.400e-2341.04cupin domain-containing protein [Alteromonas austr... [more]
WP_018956225.18.400e-2343.94cupin domain-containing protein [Streptomyces sp. ... [more]
WP_095878306.18.400e-2344.27cupin domain-containing protein [Streptomyces sp. ... [more]
XP_003055539.11.900e-2243.61predicted protein [Micromonas pusilla CCMP1545] >E... [more]
WP_005959939.11.900e-2243.41MULTISPECIES: cupin domain-containing protein [sul... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001832NSK001832Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00660.1NO13G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117321gene_6949Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00660.1NO13G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00660 ID=NO13G00660|Name=NO13G00660|organism=Nannochloropsis oceanica|type=gene|length=856bp
AATTTCAGAATCATATCTCTTTTTTCTCCACGTCGTTGCCCCTCCTAGCT
AGTTTCCTCTCTCGACAAGGGCAGAGACCACACAAGAATACCCGGGACAC
TCCTCACGACCCGTTGTCCCTTTATCATACCTTTCTAACCATAATAATAC
AATACCATCCACCCACCCACCCACAGACATAACTCCAGACAGACTCCTTC
ATCCACTTCCTTCCTTCCGTAACGTTCCTCTCGATGAAAAAAATCAACGA
CTGCTCGGCCCAAGAGATCGTCCAGCTTCTCGGACTCCATCCACgtacgt
ttgatgaaggaaaaaagtgatggggtgggagaggcaagaaagtcgacagg
gaggaacatccctatcattgaaacattggatttcttctatcctttcttgc
atcattctcatccattctcctcccttgcccaacgtttgatccctcatctt
agACCCTGAAGGTGGATTTTTTAAGGAAACGTACCGAAGCGGCGCCACGC
CAGGAGCTTCCAAAGGCCTCACCGACGAGACGGGCACCCTCCTCCCCTCG
TCCTCCATCCCTCTCTCCCCTCGTAATATCTGCACCTCCATCTTCTACCT
CCTTACTAGCGAAGCTCCCATCGGGTACTGGCACATGAACAAGTCAAATA
TAATCCACTACTACCAAGGAGGTGATCCGCTCTCCTACTTCCTCCTTCAC
CCTTCGACGGGTGCGTGGGAAAAGCACGTACTAGGCCCTGATCTTGCGAA
AGGACAGACATTGCAATTGATTGTGGATGGAGGAGTATGGAAGGCGACGG
TGTTGGAGCAGCAGGAGGAGAGGGAGGGAGGGAAGGAGGGGGGTGGGGAT
TGTTAG
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protein sequence of NO13G00660.1

>NO13G00660.1-protein ID=NO13G00660.1-protein|Name=NO13G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=155bp
MKKINDCSAQEIVQLLGLHPHPEGGFFKETYRSGATPGASKGLTDETGTL
LPSSSIPLSPRNICTSIFYLLTSEAPIGYWHMNKSNIIHYYQGGDPLSYF
LLHPSTGAWEKHVLGPDLAKGQTLQLIVDGGVWKATVLEQQEEREGGKEG
GGDC*
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Synonyms
Publications