NO13G00500, NO13G00500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G00500 vs. NCBI_GenBank
Match: OEU23752.1 (basic leucine zipper domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.0 bits (206), Expect = 3.000e-12 Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV-----RWSSL 501 LKELVE L +R EE + + + E D R VV+ FL+++++ E D+RKW +LE+ + P+TPYR F R E++N R +G + ++ADASS+ +M+E V RW+ + Sbjct: 318 LKELVEGLHAERTEEVRQRRVAIQHLAETQDVRRAVVRSFLRFQSSYETDKRKWMTLLEDDFWLKQPVTPYRCFRRSEIKNESRFTRGAEGMIADASSIAVMIEGVGSRSSRWAHI 433
BLAST of NO13G00500 vs. NCBI_GenBank
Match: OEU15785.1 (hypothetical protein FRACYDRAFT_209218 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.4 bits (202), Expect = 8.600e-12 Identity = 48/151 (31.79%), Postives = 85/151 (56.29%), Query Frame = 0 Query: 742 ELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRA-ATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQ-PLDLLEG-STLAPGTGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANA 890 E+ +GML C+FN ++ +E+MFDVM +M QL++A+G S F ++PN+++ CQR+ T V++ A+ P+ ++ VN+ W + G +V G+ LEG T A + E+ RP S + + +K + F + +PL ++ Sbjct: 385 EVSKQGMLCCKFNSAHKIVGLELMFDVMALMLQLKQAAG-SETFSVIPNTVQ-TCQRSFDTPMVMILADEPHTIVQVNKLWEDMSGYKADEVVGRSSCRTLEGEQTDANAAEVFMDEIRFKRPTSAMSIHYKKSGERFKNFFLAYPLSTDS 533
BLAST of NO13G00500 vs. NCBI_GenBank
Match: EJK65577.1 (hypothetical protein THAOC_13543 [Thalassiosira oceanica]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 42/107 (39.25%), Postives = 69/107 (64.49%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQ-YRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV 496 LKELV+ L +R E+++ + + E D R VV+ FL+ + A D DR WA +LEE+ + P+TPYR F R E+Q R+++GIDA++ D++S+ +M+E++ Sbjct: 276 LKELVDGLHAERNEDARRRRVAVRHLAEIQDLRRRVVRTFLRNHAAYDSSDRTGWATILEENFWMKQPVTPYRSFRRSEIQKQSRILKGIDAMIRDSASMSVMIESI 382
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_002295299.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87365.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.7 bits (195), Expect = 5.600e-11 Identity = 44/151 (29.14%), Postives = 84/151 (55.63%), Query Frame = 0 Query: 742 ELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGV-SCDFLIVPNSLEGACQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEG-QPLDLLEGS-TLAPGTGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANA 890 EL GML+C+FN ++ S+EIMFDVM M Q++ A G + + +++PN+++ ++ V+ A+ PY ++ VNE W +L G +V G + +L+G+ T ++ V+ RP+ +M + + + Y+ ++PL ++ Sbjct: 980 ELHQRGMLFCKFNSAHKIVSLEIMFDVMAFMLQVKMAMGFDNFNDVVIPNTVQTCQKQYDYPMVMTLADRPYTIVQVNERWENLTGYKATEVVGKRSCTILQGTDTTRKDLDKLMGPVLFKRPSCGMMTNYTKTGRRYRTYITIYPLSTDS 1130
BLAST of NO13G00500 vs. NCBI_GenBank
Match: CBJ30828.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.3 bits (194), Expect = 7.300e-11 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0 Query: 747 GMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEG 843 GML F+ +R+ +EI+FDVM++MQQLQRA G + +VPN+L A Q + AR+++ A PY + H NE WT+L G T + + P L+ G Sbjct: 65 GMLRAHFSPDNRIKRLEIVFDVMSLMQQLQRAVGQG-ELRMVPNTLALATQPSQQARLVLSAVPPYGITHTNEAWTALMGHTAEEAKMFPFTLMNG 159
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_002184920.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43656.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.5 bits (184), Expect = 1.100e-9 Identity = 49/152 (32.24%), Postives = 84/152 (55.26%), Query Frame = 0 Query: 741 VELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRA-ATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQ-PLDLLEGSTLAPGT-GFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANA 890 +E+ +GML C+FN ++ +E+MFDVM M QL+ G S F +VPN+++ CQRA T +++ A++PY ++ VN+ W + G T +V G+ L L+ T ++ E+ RP++ +L K F +L +PL ++ Sbjct: 613 MEVAKQGMLCCKFNSAHKIIGLELMFDVMAFMLQLKHTVG-SDGFSVVPNTVQ-TCQRAFDTPIMMILADSPYTIVQVNKLWEEMTGYTAEEVVGKVGLAKLQCPRTDERTLQGLMHEIRFKRPSASKLLHSKKNGDTFMNFLVAYPLSTDS 762
BLAST of NO13G00500 vs. NCBI_GenBank
Match: CBJ48632.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.6 bits (179), Expect = 4.000e-9 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 390 LKELVEDL--ERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSL 489 LK+ VE+L R+R+E + + R ++ E+ R V+ FL+YR E R++W VL+E + MPITPYR FP ++VQ G RVI+G+D V+AD SL Sbjct: 69 LKKQVEELVSGREREEMDQRAEARRVASLREI--RLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKRVIKGLDGVIADTLSL 167
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_005855540.1 (hypothetical protein NGA_2008900, partial [Nannochloropsis gaditana CCMP526] >EKU20819.1 hypothetical protein NGA_2008900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 70.1 bits (170), Expect = 4.400e-8 Identity = 35/106 (33.02%), Postives = 65/106 (61.32%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV 496 L+ ++ L + +E K + + +++E + ++ FL YRA E DRRKWA +L E V+ +P+TPYR+FP +V+ R ++GIDA + D +S ++++++ Sbjct: 41 LRHQLQSLSDAKDKEDKTELVSHVRSLEGRKLKKARLQTFLLYRARGELDRRKWAVLLAEDFVLKLPLTPYRYFPAGDVEQHARYVRGIDATIRDTASFTVLIDSL 146
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_009035758.1 (hypothetical protein AURANDRAFT_53271 [Aureococcus anophagefferens] >EGB09714.1 hypothetical protein AURANDRAFT_53271 [Aureococcus anophagefferens]) HSP 1 Score: 67.4 bits (163), Expect = 2.900e-7 Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 765 MFDVMTVMQQLQRA--SGVSCDFLIVPNSLEGACQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEGSTLAPG-TGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANAGXXXXXXXXXXXXXVPTPTHILGILRKV 918 MFD + + QQL RA S + ++ +PN+L+ A + + ARV+ A+ P+ + HVN+ WT L G T + G+ L +L+G G +V G S ++ + F +L++FPL + G +H+LG+L+ V Sbjct: 1 MFDTVGLWQQLTRAARSPTAEPYVAIPNTLDDAVRDSEDARVVTTAKRPFVIEHVNDAWTKLCGFTAEEAVGKTLAILQGPDTEKGEVADLVRGCEDGHATSALLTNYTKEGDKFQNFLRVFPLTEDDGTKV--------------SHMLGVLQNV 142
BLAST of NO13G00500 vs. NCBI_GenBank
Match: GAX12834.1 (hypothetical protein FisN_15Hh315 [Fistulifera solaris]) HSP 1 Score: 67.4 bits (163), Expect = 2.900e-7 Identity = 117/576 (20.31%), Postives = 194/576 (33.68%), Query Frame = 0 Query: 333 VVSGTVPDRGKGGEGVREKVTGSKEGLGTGSSD-GGGEEGEVGAAVVVEEGEDXXEG------------GLKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESC-VVTMPITPYRFFPRREVQ--NGLRVIQGIDAVMADASSLRLMVEAVRWSSLAIASSSCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVHFGEGGGMSMSAPVTIMYEVSPEDIIMSKDTLMCRWTMRSESSNYIPSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDARSLFVGEGGRSNKDPSSGKKCNGGTGAGGEREDGREGGMVNYNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIVELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRA-ATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEG-QPLDLLEGSTLAPG-TGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANA 890 V SG V GE R+KV+ E + + D G++ VG + L+ V+DL R+R + N +E + R V+ F R+T+E+ R W +L+ESC MP+TPYR FP EVQ R I GIDA+MAD +SL ++ ++SL +A ++ Y + E+ +++ + +M RW M + ++ V G R+ E+ +GML C+FN+ ++T E+MFDVM M QL++A+G S F ++PN+++ CQRA V+ AE PY ++ VN+ W + G + +V G + +L+ S + M+ E+ RP + ++ + + F ++ LFPL ++ Sbjct: 504 VASGIVSASDTDGELSRKKVSLKLENILDDTGDLSDGQDDSVGDKAKTNRDRNREHARNTRRRKKAYLEKLQTTVDDLCRERDTLMSERTGAANLLVEMHNTRTEVLMSFFSLRSTNEKRRSLWESILDESCFACVMPVTPYRSFPASEVQVSRCQRTILGIDAIMADTASLHVL-----FTSLV--------------------------------------------------DRRRFPTAKISFRYTLVTEEAVVAGNQMMARWVMSTTNA------------------------------------------------------VQYGART------------------------------------------------------------------------------------------EVAKQGMLCCKFNNAHKITGFELMFDVMAFMLQLKQAAG-SDGFSVIPNTVQ-TCQRAFDKPMVMTLAEPPYTIMQVNQKWEEMTGYSAEEVVGKKSCSILQNSDSSTNQLRDMMDEIRYKRPTAAYLINSRKSGELFRHFVLLFPLSTDS 878 The following BLAST results are available for this feature:
BLAST of NO13G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00500 ID=NO13G00500|Name=NO13G00500|organism=Nannochloropsis oceanica|type=gene|length=3714bpback to top protein sequence of NO13G00500.1 >NO13G00500.1-protein ID=NO13G00500.1-protein|Name=NO13G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=999bpback to top Synonyms
Publications
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