NO13G00450, NO13G00450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00450 vs. NCBI_GenBank
Match: EWM22889.1 (dna repair helicase rad25, partial [Nannochloropsis gaditana]) HSP 1 Score: 1130.5 bits (2923), Expect = 0.000e+0 Identity = 600/664 (90.36%), Postives = 622/664 (93.67%), Query Frame = 0 Query: 8 GNGGTGVKRPRRVTSSSSIASSGADKDIGSSSHLPSAYGEEDENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDEEEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYT 672 GNG GVKRPRR SS+S+ S G K+ G S+HLPSAYGEEDENVQPFLDFS L LRKH ESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTL RFSKNELPSEVV+F+RRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV XXXXXXXXXXXXXXXXF+EGEAAREMSEN EFLLVG DEE+ DDLG AIHG + KTA+FQI+K+KVRRVKEAALTMDPPYPLMEEYDFRKD ENKAL IMLKS TKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAI+EKYLVKFTS+EK LLPP+EAVVLITTYSMLAY GKRN+EV IL+QIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNS+IGPKLYEANWMDLTE+GYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKES+RERLLAAFRIS+RVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTAD+GFNAFFYT Sbjct: 46 GNGTAGVKRPRRTASSASLPSLG--KNDGGSNHLPSAYGEEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV--------PLNSGXXXXXXXXXXXXXXXXFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_009533818.1 (hypothetical protein PHYSODRAFT_563851 [Phytophthora sojae] >EGZ11073.1 hypothetical protein PHYSODRAFT_563851 [Phytophthora sojae]) HSP 1 Score: 688.0 bits (1774), Expect = 3.700e-194 Identity = 369/660 (55.91%), Postives = 467/660 (70.76%), Query Frame = 0 Query: 49 DENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDE---EEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 D + + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL L R SKN LP+ +V FI+ T +YGKAKL+L NE+++E+ EV RKLL +E I++ARV XXXXXXXX FI+ + + E N ++ + N++ E+ G+ + ++ +T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS K + PD V+ +TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPMT EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 75 DGDASGYYDFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPAGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAEDVAANAXXXXXXXXGGPRAEDASEFIQKDVSAEDQANLQYQKLLNEDYNVAEEHHPGKPSGDQQKTVRTVSFKIRKTMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPDSGVI-VTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGEFYREYLR-----ETKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 725
BLAST of NO13G00450 vs. NCBI_GenBank
Match: OQR93463.1 (TFIIH basal transcription factor complex helicase XPB subunit [Thraustotheca clavata]) HSP 1 Score: 686.4 bits (1770), Expect = 1.100e-193 Identity = 368/690 (53.33%), Postives = 470/690 (68.12%), Query Frame = 0 Query: 20 VTSSSSIASSG--ADKDIGSSSHLPSAYGEEDENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEF--LLVGNDEEEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 V S S+A+S + + + L A + ++ + DFS L+++K S+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I T+ I+ L R SKN+LP ++ FIR T +YGKAKL+L NE+++E+ EV RKLL NE I+ ARV F++ E + E N ++ LL+ + ++ D+ +A A + +T F+I K V +VK A L MD YPLMEEYDFR D +++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I K + +FTS K + D V+ +TTY+M+A+ G R+ + I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL + + + R +LY+ NPNK EYL+RYHEERGDKII+FSD V+AL YA+ + I+GGT E+ER RLL AFR S +VN + LS+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ L D Sbjct: 35 VVSKDSVAASNSLSQRIQKRLTQLDQATMDSEKGDAGYFDFSSLNMKKDHASRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFIHEYKLTPYSLYAAVSVSIETDSIIKVLDRLSKNQLPECIIKFIRECTTSYGKAKLVLHHNEFYVESLFPEVLRKLLENEQIRLARV------KEDTETSTSAAALNMTEFTSNGEFLQKEVSAEDQANLQYQKLLMEDYDQTTDNAAKATT--ASTVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPSKKIARFTSVSKDEIDKDSGVI-VTTYTMVAFGGARSSASAEAMKIIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYSEYL------KDNNTARQRALLYVANPNKFSAAEYLIRYHEERGDKIILFSDDVFALQLYAKKLQKGYIFGGTSENERMRLLQAFRSSPQVNVVCLSKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANASGGFNAFFYTLISTDTSEMFYSNKRQQYLVDQGYTFKVVTELYD 707
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_012205472.1 (hypothetical protein SPRG_11271 [Saprolegnia parasitica CBS 223.65] >KDO23839.1 hypothetical protein SPRG_11271 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 685.6 bits (1768), Expect = 1.800e-193 Identity = 378/736 (51.36%), Postives = 486/736 (66.03%), Query Frame = 0 Query: 20 VTSSSSIASSG--ADKDIGSSSHLPSAYGEEDENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDEEEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLDDALRKCMSDPKYLMSNLKKDQELRLLTQALMDANTYEEMEAEEGRLVR 754 V S S+A+S + + + L A + ++ + DFS L L+K ES+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP +VHEYKLT YSLYAAV+V+I T+ I+ L R SKN +P+ + TFIR T +YGKAKL+L NE+++E+ +V R LL NE I+ ARV F++ E E N ++ + ++ + G A A + +T F+I K V +VK A L MD YPLMEEYDFR D + + LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS EK + P E+ V++TTY+M+A+ G R + ++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA G+ IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK + GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L D A K + KD + +LL + L +A +++ +E +R Sbjct: 38 VQSKDSVAASNSLSQRIQKRLTQLNQATLDSEKGDSGYFDFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFVHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNVIPTGITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARV------KEDPTDTSTATAMTSNEFSSNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGSAKSTSAATVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPEKKIARFTSVEKDYIDP-ESGVIVTTYTMVAFGGNRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEIWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIQYHEKRGDKILLFSDDVFALRLYATKLGKGFIYGGTGERERMRLLQSFRTSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANSTGGFNAFFYTLISTDTAEMYYSNKRQQYLVDQGYTFKVVTDLYDKATFKGVF--------TSKDAQAQLLVEVL-EAQDLDKVSNDEMAAIR 749
BLAST of NO13G00450 vs. NCBI_GenBank
Match: OWZ23611.1 (TFIIH basal transcription factor complex helicase XPB subunit [Phytophthora megakarya]) HSP 1 Score: 685.3 bits (1767), Expect = 2.400e-193 Identity = 361/654 (55.20%), Postives = 452/654 (69.11%), Query Frame = 0 Query: 55 FLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDEEEDDDLGQAAIHGAESQK---TAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL L R SKN LP +V FI+ T +YGKAKL+L NE+++E+ EV RKLL +E I++ARV FI+ + + E N ++ + N++ D + QK T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS K + PD V+ +TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPMT EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 79 YYDFSILDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPQGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAEDVAANSSISAPPTAPDGVRQDTGEFIQKDVSAEDQANLQYQKLLNEDYNVADEHHPTKPSGDQQKTVRTVSFKIRKTMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPDSGVI-VTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGEFYREYLR-----ETKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 723
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_024575104.1 (dna excision repair protein ercc-3 [Plasmopara halstedii] >CEG38735.1 dna excision repair protein ercc-3 [Plasmopara halstedii]) HSP 1 Score: 684.9 bits (1766), Expect = 3.100e-193 Identity = 361/656 (55.03%), Postives = 458/656 (69.82%), Query Frame = 0 Query: 55 FLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDE---EEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL LGR SKN LP +V FI+ T +YGKAKL+L NEY++E+ +V RKLL +E I++ARV T FI+ E + E N ++ + N++ +++ G+ ++ +T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS K + P E+ V++TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPM EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 81 YYDFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLGRLSKNRLPDGIVAFIKDCTLSYGKAKLVLHHNEYYVESLYPDVLRKLLEHEHIRAARVKETTETIADHASAATAPAVASNGAGSETANEFIQKEISAEDQANLQYQKLLNEDYNLVDENHPGKTISDRQKTVRTVSFKIRKSMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKISRFTSVAKDFIDP-ESGVIVTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLR-----ESKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 727
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_008614960.1 (DNA excision repair protein ERCC-3 [Saprolegnia diclina VS20] >EQC31561.1 DNA excision repair protein ERCC-3 [Saprolegnia diclina VS20]) HSP 1 Score: 683.3 bits (1762), Expect = 9.100e-193 Identity = 377/736 (51.22%), Postives = 484/736 (65.76%), Query Frame = 0 Query: 20 VTSSSSIASSG--ADKDIGSSSHLPSAYGEEDENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDEEEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLDDALRKCMSDPKYLMSNLKKDQELRLLTQALMDANTYEEMEAEEGRLVR 754 V S S+A+S + + + L A + ++ + DFS L L+K ES+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP +VHEYKLT YSLYAAV+V+I T+ I+ L R SKN +P+ + TFIR T +YGKAKL+L NE+++E+ +V R LL NE I+ ARV F++ E E N ++ + ++ + G A A + +T F+I K V +VK A L MD YPLMEEYDFR D + + LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS EK + P E+ V++TTY+M+A+ G R + ++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA G+ IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK + GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ L D K + KD + +LL + L +A +++ +E +R Sbjct: 38 VQSKDSVAASNSLSQRIQKRLTQLNQATLDSEKGDSGYFDFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFVHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNVIPTGITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARV------KEDPTDASTATAMTSNEFSSNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGSAKSTSAATVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPEKKIARFTSVEKDYIDP-ESGVIVTTYTMVAFGGSRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEIWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIQYHEKRGDKILLFSDDVFALRLYATKLGKGFIYGGTGERERMRLLQSFRTSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANSTGGFNAFFYTLISTDTAEMYYSNKRQQYLVDQGYTFKVVTELYDKTTFKGVF--------TSKDAQAQLLLEVL-EAQDLDKVSNDEMAAIR 749
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_002896491.1 (TFIIH basal transcription factor complex helicase XPB subunit [Phytophthora infestans T30-4] >EEY67518.1 TFIIH basal transcription factor complex helicase XPB subunit [Phytophthora infestans T30-4]) HSP 1 Score: 683.3 bits (1762), Expect = 9.100e-193 Identity = 359/662 (54.23%), Postives = 460/662 (69.49%), Query Frame = 0 Query: 49 DENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDE---EEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 D + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL L R SKN LP +V FI+ T +YGKAKL+L NE+++E+ +V RKLL +E I++ARV T FI+ + + E N ++ + N++ +++ LG+++ ++ +T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW +QF+ + I EK + +FTS K + PD V+ +TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPM EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 75 DGEASGYYDFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPEGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPKVLRKLLEHEHIRAARVKETAEDIASNASSASAPPVAPGGTRPEDANEFIQKDVSAEDQANLQYQKLLNEDYNVADENHLGKSSGDQQKTVRTVSFKIRKTMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTSQFKMWTNIPEKKIARFTSVAKDYINPDSGVI-VTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLR-----EAKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 727
BLAST of NO13G00450 vs. NCBI_GenBank
Match: XP_008915039.1 (hypothetical protein PPTG_18896 [Phytophthora parasitica INRA-310] >ETI31708.1 hypothetical protein F443_21340 [Phytophthora parasitica P1569] >ETK72097.1 hypothetical protein L915_20742 [Phytophthora parasitica] >ETL25514.1 hypothetical protein L916_20625 [Phytophthora parasitica] >ETL78728.1 hypothetical protein L917_20487 [Phytophthora parasitica] >ETM32001.1 hypothetical protein L914_20495 [Phytophthora parasitica] >ETM99660.1 hypothetical protein PPTG_18896 [Phytophthora parasitica INRA-310] >ETO60419.1 hypothetical protein F444_21363 [Phytophthora parasitica P1976] >ETP01507.1 hypothetical protein F441_21238 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 682.6 bits (1760), Expect = 1.600e-192 Identity = 360/662 (54.38%), Postives = 458/662 (69.18%), Query Frame = 0 Query: 49 DENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDE---EEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 D + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL L R SKN LP +V FI+ T +YGKAKL+L NE+++E+ EV RKLL +E I++ARV T FI+ + + E N ++ + N++ +++ G+ + ++ +T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS K + PD V+ +TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPM EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 75 DGEASGYYDFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPEGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAEDIAANASSTTAPPVAPGGTRPEDSNEFIQKDVSAEDQANLQYQRLLNEDYNVADENHPGKTSGDQQKTVRTVSFKIRKTMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPDSGVI-VTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLR-----ETKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 727
BLAST of NO13G00450 vs. NCBI_GenBank
Match: ETP29676.1 (hypothetical protein F442_21179, partial [Phytophthora parasitica P10297]) HSP 1 Score: 682.6 bits (1760), Expect = 1.600e-192 Identity = 360/662 (54.38%), Postives = 458/662 (69.18%), Query Frame = 0 Query: 49 DENVQPFLDFSRLSLRKHQESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLGRFSKNELPSEVVTFIRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEGEAAREMSENTEFLLVGNDE---EEDDDLGQAAIHGAESQKTAMFQISKDKVRRVKEAALTMDPPYPLMEEYDFRKDTENKALQIMLKSTTKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIDEKYLVKFTSKEKALLPPDEAVVLITTYSMLAYTGKRNDEVKRILDQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSLIGPKLYEANWMDLTEEGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESERERLLAAFRISNRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADDGFNAFFYTLVCSDTVEMRYSTKRQQYLVDQGYTYKVIPNLLD 706 D + DFS L ++ E++P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V I TE IL L R SKN LP +V FI+ T +YGKAKL+L NE+++E+ EV RKLL +E I++ARV T FI+ + + E N ++ + N++ +++ G+ + ++ +T F+I K V +VK A L +D YPLMEEYDFR D L++ LK TT++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS K + PD V+ +TTY+M+A+ G+R + ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN LIGPKLYEANWMDLT+ G+LANV CVE WCPM EF+ EYL E + +K R +LY+ NPNK E+L++YHEERGDKI++FSD V+AL YA + IYGGT E ER RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYTL+ +DT EM YS KRQQYLVDQGYT+KV+ +L + Sbjct: 87 DGEASGYYDFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPEGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAEDIAANASSTTAPPVAPGGTRPEDSNEFIQKDVSAEDQANLQYQRLLNEDYNVADENHPGKTSGDQQKTVRTVSFKIRKTMVEQVKRACLDLD--YPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPDSGVI-VTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLR-----ETKSARK-RALLYVANPNKFTAAEFLIQYHEERGDKILLFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRSSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFE 739 The following BLAST results are available for this feature:
BLAST of NO13G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00450 ID=NO13G00450|Name=NO13G00450|organism=Nannochloropsis oceanica|type=gene|length=3807bpback to top protein sequence of NO13G00450.2 >NO13G00450.2-protein ID=NO13G00450.2-protein|Name=NO13G00450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=675bpback to top protein sequence of NO13G00450.1 >NO13G00450.1-protein ID=NO13G00450.1-protein|Name=NO13G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=821bpback to top Synonyms
Publications
|