NO13G00440, NO13G00440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00440 vs. NCBI_GenBank
Match: EWM22881.1 (atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 523.1 bits (1346), Expect = 1.800e-144 Identity = 397/916 (43.34%), Postives = 484/916 (52.84%), Query Frame = 0 Query: 1 MFAIERFVATEEGGGETQQQHDVDEKEKKQDKLALYLARVQQRRGDRKKESKMKRKRDLSATGQDETQEKKGIAPTYIQEDKEKTAKRKVEEEHAVETXXXXXXXXXXXXXXXXXXXXXXXXEDKAEQQASLHSSPTXXXXXXXXXXXXXXXXXXXXXXRSSGLEMIRRMLSGHMAKPSRTTQAQFTPPGKAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVQRTSLSSLMDMGTTPPLPSPPPSLPPAGTMSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPP--------------SLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGMSEEVVREVLRL 903 MFAIER+ ATE ++ D + +K DKLA YLARV+ R G +K++ KR R ++ G + + + AP+ E ++K +E+ E + AS P XXXXXXXXXXXXXXXXX GL+ +RR+LSGHM K +R+ F P S R T P +A+A +WGLD RLL LA+ + PVQA+VLP XX+ LLP RDA+VCAPTGSGKTL+YVL LL L++RRVGRLRGLVLVP+RDLA QV+REF +LAP+VGV V L +GQ+DF+AEQ+ + G G+EG R VDV+VATP R LVLDE DRL+NQSYQGW+ R+H A Y RPGTF S P ++ GS SY + PTT RL L+P PL KLLFSAT T+NPQKLARL+L PRYFS+ GH++DPPP+ G D DE P +G SG P+TL+E+VV C+ ++KPL+LLALLLREL+AF+S P P S P L+L+FTSSLDSTHRL RLLQLCTAT+QVPEN FAL PP RVLVASDGMARGIDLPNV+AV+NYD PRQ TYIHRVGRTARAGREGRS T LK GQE+EFERLR+ VGDGGKW+ VGR G+LG LEP LPGY+KALRGL++VMG EKGGRLK TEGM+E +VR++LR+ Sbjct: 37 MFAIERYEATE------ALENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPR-VAEEGVGQPTDVR--APSMESSGLE---RKKKKEDRGTE--------RCERTTQGTQAKARHPADPPPLPSASPAFLPFPTSGTXXXXXXXXXXXXXXXXXXXXGLDSVRRLLSGHMHKATRSRPLPFPPVASGGT---------------------EIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFXXXXXXXXXXXXPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHXXXXXXXXAR-----LLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGR--GVDVLVATPXXXXXXXXXXXXXXXXXXRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTF-----SLPXXXXXXXXXXXXXXXXXXXLEDVVGS---SYTLRPTTQRL----------PFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPP----VG---------SGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFAL----PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRM 869
BLAST of NO13G00440 vs. NCBI_GenBank
Match: CBJ31111.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 328.2 bits (840), Expect = 8.400e-86 Identity = 263/694 (37.90%), Postives = 348/694 (50.14%), Query Frame = 0 Query: 284 GTMSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAM---------------------QGR------REDGREGPREGW------------VDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKE----------------GRKEVEDEEIEKEEGGSTCTS-----------------------YIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKE--GEDGDEGP-EEGFIGEEGGEGEAISG-----TPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLC-----TATIQVPENIFALSSSIP-PSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRL 886 G + +WGLDPRL L ++HFFP+Q RV+P ++ +T S + RD V APTGSGKTLV+VL +LQAL RRV RLR LVL+P+RDLAMQV F A G+ V L IGQT+F EQ A+ QGR G GW VD+VVATPGRL+DH+ +T GFTL+HLRYL++DE DRL+NQSYQGW +V +AAY + PGT + G++ + ++VE + G ++ +S + + P T+R R ++ + PLRKLLFSAT T+NPQKLA L++ NP ++ +E G DGD P +E G G A+ G TPATL+E VC + KPLVLL+ LLRE+ + R L ++FTSS+DSTHRL RLLQL TA + +P ++ V EFSSSL Q QR+++++R R G VRV+V SDGMARG+DL V VVNYD P QAKTY+HRVGRTARAG G +VT+ K GQ ++F +R G+ K R+ + L PL Y+ L+ L++VM E+ G L Sbjct: 170 GPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIV------ATERHSH-VQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVXXXXXXXXXXXXXXXXXQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGR---------PLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTAAGGQRRETSGADGDPRPSQETRRSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLS-LLREM-------VGRQAD---LSVVFTSSVDSTHRLFRLLQLFGGFERTAGTDAEGGGGDGDTHLPDDAIHGDGNDDGDGGVAEFSSSLGQRQRSSIIRR-------ARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQAKTYVHRVGRTARAGSRGTAVTITKKGQVKQFLNMRSGIDK--KRVRLDSSPADQ-SRLLPLAGRYQLCLKDLKEVMEAERTGEL 826
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_002181564.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46778.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 290.8 bits (743), Expect = 1.500e-74 Identity = 202/556 (36.33%), Postives = 284/556 (51.08%), Query Frame = 0 Query: 288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRR--EDGRE------GPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERL 836 + A T W + P L + L +FFP+QA +P ++ S + RD + APTGSGKTL YVL +L +L++R++ RLR LV++P+RDLA QVF+ F S + V L IGQ+DF AEQ A+ + EDG + + +DV+V TPGRL+DH+D T GF+LEHLR+L++DE DRL++Q+Y W RV ++A R G G +D + + + S + P LRK L SAT T +PQKLA L L NP++F + + G +GF + P L E V C+ + KP+VLLAL+L +L P S +++FT+SLDSTHRL RLLQL + E P S V EFSS+L+Q +R+AL++RC + V V+V SDGM+RG+D+ V AV+NYD P AKTY+HR GRTARAG+EG +++LLK GQ R+F+++ Sbjct: 6 IDQAATAWKIAPFLTNNLKRDGFANFFPIQALAIPDVI-------ASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGNDHDLPEKRDPQSTIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGGVVG---------------------DDTDFNTNDSYRSVASSVCRP------------------------------VQLRKFLVSATLTRDPQKLASLKLVNPKHFDVH--------QLRTG-------HQGFFNTNTKK----YSMPEGLHEHTVECTAEQKPIVLLALVLDQL-----TPQQSQSSSKQSVIVFTASLDSTHRLARLLQLLWVSAGYGE---------PDS------------VVEFSSALNQHERSALMKRC-----NDPQDKVSVVVCSDGMSRGMDIDAVRAVINYDVPGLAKTYVHRCGRTARAGKEGHAISLLKGGQTRQFDKM 453
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_002289414.1 (atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335] >EED92951.1 atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 283.1 bits (723), Expect = 3.100e-72 Identity = 216/585 (36.92%), Postives = 300/585 (51.28%), Query Frame = 0 Query: 328 PLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVG--------RLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIG----QTDFEAEQKAMQG-----RREDG----REGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGM 892 P + ++ L RD APTGSGKTL +VL LL AL + G RLR LV++P RDLA QV F+ A + + L +G ++D E++++ RR++G E + VD++VATPGRLMDH+D T GFTL+HLR+LV+DE DRLVNQ YQ W RV EA S + +R SS+ + G K+ + GG + P PLRK+LFSAT T +PQKLA L L+NP++F D + ++ N K G P L E +V C+ + KP+VLLALLL Q S L I +FTSS+DSTHRL RLLQL ++ P SS + EFSSS+S QRA +L+RC ++ V+ R V VLV SDGM+RG+DLP V+AV+NYD P AKTY+HR GRTARAG+EG+++++LK GQ +F+R+R+ +G G K + E+ ++ L Y+ +R L+ V+ E+ L ++ + Sbjct: 4 PDVIESERNAHLRGARDVCCHAPTGSGKTLAFVLPLLTALYNESPGQSCTRGFRRLRALVVLPGRDLAKQVHDVFVRYAKGSHLKIGLAVGGGKKKSDLVYERRSLVAYDGTTRRDNGIQVFPEFGGQSAVDILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEA----------SNSSNRFGSSVPVVRHGEKD------QANTGGELVSGMFGRP------------------------------VPLRKMLFSATLTQDPQKLAVLGLKNPKHF--DANQVE---NIKAGS---------------------YSVPEGLTERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVNLSI-VFTSSVDSTHRLARLLQL----------LWEAGGYGP-----------SSTIAEFSSSISAKQRAGILRRCRSSNVSNR---VSVLVCSDGMSRGMDLPCVSAVINYDVPSYAKTYVHRCGRTARAGKEGKAISVLKGGQIAKFQRMRRLIGGGSVEKMGIKKEL-----IKGTLSTYQACVRALKKVIEAEENEELSRSDSL 486
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_016605956.1 (hypothetical protein SPPG_06906 [Spizellomyces punctatus DAOM BR117] >KNC97916.1 hypothetical protein SPPG_06906 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 282.7 bits (722), Expect = 4.000e-72 Identity = 233/613 (38.01%), Postives = 314/613 (51.22%), Query Frame = 0 Query: 271 PPLPSPPPSLPPAGTMSVAN--ACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRR--EDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVC-SGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDL-PNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRL----GGLEPLLPGYRKALRGL 874 P S P ++P T S + A +WGL PR+L+ L +I H FPVQ VLP LL T SS +P D V APTGSGKTL Y L +++AL R + RLR LV++PTRDLA QV F L + L+ GQT F EQ+ + E E G VD+VVATPGRLMDH+ T+GFTL HLRYLV+DE DRL+NQSYQ W V AA Q S GE E + +E E +++H T RS P + TPL+KLLFSAT T NP K+A LNL +P Y ++ A G + +E + + ++ P TL E ++VC S +KPL+LL LL +L L+ L+FT S+++ HRL LLQL +++ ++PE+ S+ ++ AS+I FSS L +R LL + R+G + L+ SD MARG+DL +V AVVNYD P + KTY+HR+GRTARAGR G + T+L+ + R F+ G+ K +R G +V +L +E L Y+KAL L Sbjct: 167 PAWISNPLTIPAQITKSSESDVADIRWGLSPRILARLREKDISHLFPVQMAVLPRLL------KTRHSSASIPPGDICVSAPTGSGKTLAYALPIVEALLDRIIPRLRALVVLPTRDLAAQVKATFDMLLRGSDLRALLITGQTPFALEQQQLVASEAWEVATEEHGSGKVDIVVATPGRLMDHLRGTKGFTLRHLRYLVIDEADRLLNQSYQDWLTHVLAAAVAQPERNLADGI----VSEFGEATSATCEPQLDENE----------FLLHKTATWRRS---QIVDGKVSAAHSSIPSVHHYTPLQKLLFSATLTRNPAKIASLNLYDPVYIAV----------APAGSASTDLQQETVVERLTTDARFVA--PHTLSERMIVCTSAGEKPLMLLHLL-------CNLGLTG-------ALVFTKSVEAAHRLAALLQLFSSSYEMPESSSEDESTEGGAVKEA--KSASTIAQAFSSDLPPSERKRLLS-------SFRDGKLTALICSDVMARGMDLGESVKAVVNYDVPTRVKTYVHRIGRTARAGRVGVAYTILEDREVRWFK------GEMAKVERSGSEKVEKLKVVSDDVEGLTAPYQKALAEL 715
BLAST of NO13G00440 vs. NCBI_GenBank
Match: OEU21077.1 (DEAD-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 273.9 bits (699), Expect = 1.900e-69 Identity = 215/616 (34.90%), Postives = 308/616 (50.00%), Query Frame = 0 Query: 286 MSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSV--GVTVALVIGQTDFEAEQKAM------QGRREDGREGPREG--WVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLAL--LLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLK-PGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889 + +A A +WG+ L+ L ++ HFFP+QA +P + +S + RD APTGSGKTL +VL +L AL+SRRV RLR LV++P+RDLA QV+ F + + + L IGQT+F AEQK + ++ R+ P G VDV+V TPGRL+DH+D T GFTL+HLR+LV+DE DRL++QSY GW QRV + + AP P S+ + ++ + E C LRKLL+SAT T +PQKL+ L L NP+YF + H + + + D G G ++ P LKE V C+ + KP+VLLAL SSL++THRL RLLQL +FA + TPP EFSS+L+Q QR+ L++RC + V VL+ SDGM+RG+DL +V AV++YD P AKTY+HR GRTARAG++G ++ +LK GQ +F +LR+ + +RV + V + + ++P YR+ + L++V+ E LK+T Sbjct: 4 LPIAEAARRWGMAEFLVRNLQSNGHEHFFPIQA----LTIPDAIIAERHMTSLRI--RDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLILGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH----------AP--PTQSMDSKDNSTDKIYSDGTSSESPSDIC-----------------------------------QRVQLRKLLYSATLTKDPQKLSSLRLINPKYF--NAHDLKRRSSTGVNDSRDIGNMNG-----NNLENSLYRMPEQLKECTVECTAEQKPIVLLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLEATHRLTRLLQL----------LFAAGNY------GTPPV-------EFSSNLNQNQRSMLMKRCNDE----NDRSVSVLICSDGMSRGMDLASVVAVIHYDVPGMAKTYVHRCGRTARAGQDGTAIAILKGKGQAGQFAKLRRLI---ALPERVTKTSV-KTSLVRCVIPLYRQCVSCLKEVLAAEDRNELKST 528
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ORX97486.1 (DEAD-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 263.8 bits (673), Expect = 1.900e-66 Identity = 201/580 (34.66%), Postives = 292/580 (50.34%), Query Frame = 0 Query: 297 LDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDV 877 L ++LS ++I FF VQ VLP L L +SS ++ G D V APTGSGKTL YV+ +++ LS+R V RLR L+++PTRDL +QV F + + + ++ GQT F EQ + G +G VD+++ATPGRL+DH+ T FTL+HLRYLV+DE DRL+NQSYQ W V +AA G RP I EG + +EG F +T ++KLLFSAT T NP K+A L+L NPRY ++ + D DE EG EG TP+TLKE ++ CS +KP+++L LL L+ S+ L FT S+++ +RL +L I+V + F ++ P ++ + E+S L Q +R ++L++ ++G +R+L+ SD +ARGIDL +V AV++YD P K YIHRVGRTARAGREG + T+++ + R F+ + + K++ E LEPL+P Y K L L+ + Sbjct: 48 LSSQILSRCKDNSIEEFFAVQTAVLPAL----LASKSSSLNYTFSG-DLCVSAPTGSGKTLAYVIPIVETLSTRVVTRLRALIILPTRDLVVQVKDTFDAFCKGTNLKIGVITGQTSFAQEQSQIVGGGSQVLQGGASN-VDILIATPGRLIDHLTSTPNFTLQHLRYLVIDEADRLLNQSYQDWLSNVLQAA--------GKATTKRPEDPITMDSEGIPVHDAISGRVQEG--------------------------------FCDLFEPQATRVQKLLFSATLTRNPGKIASLHLVNPRYIAVQ----------RTANDNDE-------DAEGSEGRYT--TPSTLKEFMIPCSPSEKPMIVLHLLY-HLKVNSA-------------LCFTKSIEAANRLYKL-------IEVFDGFFKEAN---------PEYESTIMAAEYSGDLPQSERTSILKKF-------KKGEIRLLICSDLIARGIDLDSVEAVISYDAPMYIKKYIHRVGRTARAGREGVAYTIVEEQEMRYFKSMLQKAQHYSVVKKMNVKE----KTLEPLMPNYEKTLEVLKSI 521
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ETI40087.1 (hypothetical protein F443_14395 [Phytophthora parasitica P1569]) HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65 Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0 Query: 288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889 VA QW L P + + LA NIR FFPVQA +P +L T D + APTGSGKTL YV+ ++Q L R V R+R L+++P+RDLA+QV + + L IGQ +F AEQ A+ G R VD++VATPGR + +++DE DRL+NQSYQ W +V+ + + +EV+++ + G + I+ IR TPL ++L SAT T NP+KLA + + N I G + DP NAK+G GD E G S TP L E + C KPLVLL LL + S +IFT+S++STHRL RLLQL + PE I EFSSSLSQ QR+AL+ C + G V +V SD MARG+D+ +V VVNYD P KTYIHRVGRTARAGR GR VTL+K GQ + R+ K D K K + ++ L+P Y AL+ L+D + EK G+L+AT Sbjct: 20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ETK80241.1 (hypothetical protein L915_14037 [Phytophthora parasitica] >ETL33674.1 hypothetical protein L916_13933 [Phytophthora parasitica] >ETL86951.1 hypothetical protein L917_13725 [Phytophthora parasitica] >ETP10049.1 hypothetical protein F441_14275 [Phytophthora parasitica CJ01A1] >KUF79476.1 ATP-dependent RNA helicase DDX51 [Phytophthora nicotianae]) HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65 Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0 Query: 288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889 VA QW L P + + LA NIR FFPVQA +P +L T D + APTGSGKTL YV+ ++Q L R V R+R L+++P+RDLA+QV + + L IGQ +F AEQ A+ G R VD++VATPGR + +++DE DRL+NQSYQ W +V+ + + +EV+++ + G + I+ IR TPL ++L SAT T NP+KLA + + N I G + DP NAK+G GD E G S TP L E + C KPLVLL LL + S +IFT+S++STHRL RLLQL + PE I EFSSSLSQ QR+AL+ C + G V +V SD MARG+D+ +V VVNYD P KTYIHRVGRTARAGR GR VTL+K GQ + R+ K D K K + ++ L+P Y AL+ L+D + EK G+L+AT Sbjct: 20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_008910026.1 (hypothetical protein PPTG_14463 [Phytophthora parasitica INRA-310] >ETN04632.1 hypothetical protein PPTG_14463 [Phytophthora parasitica INRA-310]) HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65 Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0 Query: 288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889 VA QW L P + + LA NIR FFPVQA +P +L T D + APTGSGKTL YV+ ++Q L R V R+R L+++P+RDLA+QV + + L IGQ +F AEQ A+ G R VD++VATPGR + +++DE DRL+NQSYQ W +V+ + + +EV+++ + G + I+ IR TPL ++L SAT T NP+KLA + + N I G + DP NAK+G GD E G S TP L E + C KPLVLL LL + S +IFT+S++STHRL RLLQL + PE I EFSSSLSQ QR+AL+ C + G V +V SD MARG+D+ +V VVNYD P KTYIHRVGRTARAGR GR VTL+K GQ + R+ K D K K + ++ L+P Y AL+ L+D + EK G+L+AT Sbjct: 20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511 The following BLAST results are available for this feature:
BLAST of NO13G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00440 ID=NO13G00440|Name=NO13G00440|organism=Nannochloropsis oceanica|type=gene|length=3641bpback to top protein sequence of NO13G00440.1 >NO13G00440.1-protein ID=NO13G00440.1-protein|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=927bpback to top Synonyms
Publications
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