NO13G00400, NO13G00400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM26413.1 (hypothetical protein Naga_101468g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 256.1 bits (653), Expect = 2.600e-64 Identity = 126/233 (54.08%), Postives = 160/233 (68.67%), Query Frame = 0 Query: 3 LPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLAGT 234 LP GLS+V+ +RP + P ++++NPDG+TA++W FDF K+ +KRVF+A D CAPE L VT LAYLVNATDL+ YCA PL P VL VRY KKV+ TCAPTPAP+VNPA PF +FG+GQRCL+A +LAPFD R L ++ G + +I +HR L I P++CF YCS+NG E PFFFNWNT T+QCFCCG C LIV+P F+AY+V + T Sbjct: 106 LPTGLSLVRTSSRPKARIHP-EVVENPDGSTAVFWLGFDFAKAKGNKRVFKAKAKVDACAPETLTVTGLAYLVNATDLTTYCATPLASPAVLNVRYSKAKKVA--------TCAPTPAPTVNPAQPFVLFGDGQRCLEASRLAPFDDR--RLLSSSNGREYAHSIHREHRHLQ--SIATPSDCFTYCSLNGGESVPFFFNWNTVTSQCFCCGNVCTLIVDPAFSAYEVTMDAT 325
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM25605.1 (hypothetical protein Naga_100543g1 [Nannochloropsis gaditana]) HSP 1 Score: 226.9 bits (577), Expect = 1.700e-55 Identity = 115/234 (49.15%), Postives = 154/234 (65.81%), Query Frame = 0 Query: 3 LPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDFKKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKK--VSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLAGT 234 LPAGLS VK A P R SP I+ N DGTTAIYWT F+ + K +F+ V ++CA E L V LAY++NATD + C+ L +P+ LR+RYP ++K + + +TCAPTPAP+ NP+ PF FG GQRCL+A +LAPF DRRL + + + D HR L V I P +C+ YCS+NG E +PFFFNWNTAT QCFCCGG+C LI++P+F+ ++V++ T Sbjct: 72 LPAGLS-VKRTASPRRAGSPV-IVSNIDGTTAIYWTKFNL--THKHLFRVKVGVENCASEALAVRVLAYVLNATDSATECSQSLANPLNLRIRYPASQKYGLGKKKQKMPMTCAPTPAPTTNPSAPFVPFGVGQRCLEASRLAPFEDRRLKGQEDTIKISEDSKVDDKIHRPLGLVAIQTPFDCYTYCSLNGGESAPFFFNWNTATTQCFCCGGQCTLILDPEFDTFQVLIPAT 301
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20109.1 (hypothetical protein Naga_101756g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 216.1 bits (549), Expect = 3.000e-52 Identity = 118/238 (49.58%), Postives = 150/238 (63.03%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPF--RMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 M+LP+GLSV++ ARP R+ SP +I+QN DG+TAI+W DF KS KRVF+A V+ D+CAPEML +T LAYL NAT + +C PL P VLRVRY +K RSVTCAPTPAP+VNP PF +FGEGQR Q G LAPF R ++H S +RQL I C++YCS+N N SPFFFNWN T++CFCC C I +P ++ Y+V++ T Sbjct: 69 MDLPSGLSVLRTVARPASKRIASP-EIVQNLDGSTAIFWLGMDFTKSKGGKRVFRAKVVVDECAPEMLVITGLAYLANAT--ATFCETPLASPEVLRVRYGKSK--------RSVTCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFSERRLSMHPGP------SKTHVANRQLQ--AIGTTEACYEYCSLNANVSSPFFFNWNRVTSECFCCLSTCTPFIFDPAYDVYEVIIPAT 287
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20143.1 (hypothetical protein Naga_101529g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 213.8 bits (543), Expect = 1.500e-51 Identity = 118/232 (50.86%), Postives = 142/232 (61.21%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPFRMLSPA-QIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFD-RRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYK 228 + LP GLSV++ RP S A QI+QN DG T IYW DF K KRVF+A V + CAPE L VT LAY NAT S +C PL +P +L VRY KK S TCAPTPAP+VNP PF +FGEGQR Q G LAPF+ RRLS ++DE + T +RQLPPV I P +CF+YCS+N N SPF F+WN QCFCC C LI +PD++ Y+ Sbjct: 69 LALPTGLSVIRTATRPASKRSVAPQIVQNADGMTNIYWLGVDFTRPKGGKRVFRAKVAVEKCAPETLVVTGLAYFANAT--STFCETPLTNPEILHVRYGKFKK--------SATCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFNTRRLSMHSDSDEVRDASQTRRAVNRQLPPV-IATPEDCFEYCSLNANVSSPFLFSWNRVATQCFCCLSVCTPLIFDPDYDVYE 289
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM23483.1 (putative lipase, partial [Nannochloropsis gaditana]) HSP 1 Score: 210.3 bits (534), Expect = 1.600e-50 Identity = 114/240 (47.50%), Postives = 146/240 (60.83%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADE--GLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 + LP GLSV + RP + +P QI+++ DGTTAIYW F KS KR F+ V AD+CAP+ L V A AYLVNATD S C PL P +++VRY L + TCAPTPAP++NP PF + GEGQR Q G+LAPF DRRLSA + + G+ S +H Q I+ P C++YCS+N E PF F+WNT T+QCFCC G C L+ +PDFN Y+ +L T Sbjct: 69 LNLPNGLSVERTAMRPSSKPYAPPQIVEDTDGTTAIYWLGVAFTKSKGGKRRFRVKVKADECAPDTLAVDAFAYLVNATDAS--CITPLASPAIVKVRY--------SKLKNAATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPFQDRRLSAHPGSSKHGGIMSFGRAGDRHLQ----SIDTPEACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDFNVYEALLPKT 294
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM21515.1 (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana]) HSP 1 Score: 206.1 bits (523), Expect = 3.100e-49 Identity = 106/233 (45.49%), Postives = 145/233 (62.23%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDF-KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVEPDFNAYKVVLA 232 + LP+ LSVV+ RP ++N + TAIYW+D DF +++ +++F V ADDCAP+ L++ ALAYL NAT + +C VPL P VL +RY +K R+ TC PTPAPS+N A PF FG GQRC +A +LAPF DRRL + I + R L I+ P +C++YCS+NG P+PFFFNWNT ++C CC GEC LI +P F+A+KV++A Sbjct: 69 ISLPSSLSVVRTTTRPRTPYVLPYAVENLE-ETAIYWSDIDFARRNRRKLFHVKVQADDCAPKQLEINALAYLANAT--TTHCTVPLSKPEVLNIRYAESK--------RTTTCVPTPAPSINLAEPFVPFGLGQRCAEASRLAPFGDRRLQEHLERGRLQDNTRVISARARHLQ--GIDTPQQCYEYCSLNGGAPAPFFFNWNTVASECLCCAGECTLIRDPAFDAFKVIVA 288
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana]) HSP 1 Score: 205.7 bits (522), Expect = 4.000e-49 Identity = 112/238 (47.06%), Postives = 141/238 (59.24%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH---NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 M LP+G+SV + RP + P +++ N DGTTA+YW D DF + SKR F+ V D CAPE L V A AYL NAT S +C PL P +LR RYP K TCAPT APSVNP F +F GQR Q GQLAPFD R +LH N LS D HRQL P+E + +C++YCS+ G + +PFFF+WN AT+QCFCC C I +P F+ KV+++ T Sbjct: 81 MTLPSGMSVRRTATRPSIKPHMPPEVVGNIDGTTALYWLDIDFSRRSKRRFRVKVNIDLCAPEHLVVDAFAYLNNAT--STWCVTPLASPALLRARYPKEK---------PATCAPTLAPSVNPTQSFVVFAPGQRFSQGGQLAPFDNRRLSLHPEMNLAINQDVLSFGDTYHRQLQPIETKD--DCYEYCSLVGGKIAPFFFSWNNATSQCFCCATVCTPFIYDPAFDVQKVLVSAT 305
BLAST of NO13G00400 vs. NCBI_GenBank
Match: XP_005852708.1 (hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526] >EKU23125.1 hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 203.4 bits (516), Expect = 2.000e-48 Identity = 109/238 (45.80%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 + LP GLSV + RP + +P QI+++ DGTT+IYW F KS KR ++ + AD+CAPE L V A AYLVNATD S C PL P +++VRY L + TCAPTPAP++NP PF + G+GQR Q G+LAPF DRRLSA + + ++ HR L I+ P C++YCS+N E PF F+WNT T+QCFCC G C L+ +PD N Y+ +L T Sbjct: 200 LNLPNGLSVERTAMRPSSKPYTPPQIVEDTDGTTSIYWLGVAFTKSKGGKRRYRVNMKADECAPETLAVDAFAYLVNATDAS--CITPLASPAIVKVRY--------SKLKNAATCAPTPAPTINPTQPFVLLGKGQRFSQGGRLAPFQDRRLSAYPASSKHGSIMALGQAGHRHLQ--SIDTPQACYEYCSLNSGEVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDSNVYEALLPKT 425
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM26026.1 (hypothetical protein Naga_100629g4 [Nannochloropsis gaditana]) HSP 1 Score: 200.7 bits (509), Expect = 1.300e-47 Identity = 110/223 (49.33%), Postives = 135/223 (60.54%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGECDLIVE 221 + LP GLSV + RP + +P QI+QNPDGTTAIYW DF K KR F+ V AD+CAPE L + A AYLVNAT A + + +L VRYP +K + TCAPTPAPSVNPA PF +F EGQRC +AG+LAPF+ R +L + G G R L I++P C+ YCS+N E +PFFFNWNTAT+QCFCCG I E Sbjct: 69 LNLPNGLSVERAVMRPSTKPFTPPQIVQNPDGTTAIYWLGIDFTKPKGGKRRFRVKVKADECAPETLTIDAFAYLVNAT---AASCITSTNSAILSVRYPKHK--------NAATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPFEDRRLSLSSGHGGNGPAQRHSGD-RDLQ--SIDSPEACYAYCSLNAGEETPFFFNWNTATSQCFCCGSVSPTIRE 277
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM23769.1 (hypothetical protein Naga_100411g1 [Nannochloropsis gaditana]) HSP 1 Score: 197.6 bits (501), Expect = 1.100e-46 Identity = 146/347 (42.07%), Postives = 187/347 (53.89%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH---NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGVIWTQQTNSTQQQWESITSSSDGTKLAAGAHEGFIYTSTD 341 + LP GLSV + RP + +P QI+++ DG TAI W F +K KR F+ V AD CAPE L V A AYL+NATD S C PL +P +++VRY K TCAPTPAP+VNP PF + GEG R Q +LAPF+ R LH N EG+ ++ + RQL I+ P C++YCS+N + PF F+WNT T+QCFCC G C LIV+PD+N Y+ +L XXXXXXXXXXXXXXXXXXXX T+Q+ + + W+SI SSSD T +AA + G I+TSTD Sbjct: 100 LNLPDGLSVERTSMRPSSKPYTPPQIVEDADGVTAISWQGLAFTKRKGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTS--CITPLANPAIVKVRYMKRNK--------DATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLLLHTGINRHEGI--IARYHPEDRQLQ--SIDTPEACYEYCSLNAGKEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDYNVYEALL---------------------------------------------PRXXXXXXXXXXXXXXXXXXXXXXXXXXTEQSAAGSRDWQSIASSSDFTNIAAVVNGGSIWTSTD 387 The following BLAST results are available for this feature:
BLAST of NO13G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00400 ID=NO13G00400|Name=NO13G00400|organism=Nannochloropsis oceanica|type=gene|length=2817bpback to top protein sequence of NO13G00400.1 >NO13G00400.1-protein ID=NO13G00400.1-protein|Name=NO13G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bpback to top Synonyms
Publications
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