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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr13 | genome | chr13:87851..90794 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO13G00240 vs. NCBI_GenBank
Match: EWM22840.1 (hypothetical protein Naga_100295g4 [Nannochloropsis gaditana]) HSP 1 Score: 233.8 bits (595), Expect = 1.400e-57 Identity = 139/313 (44.41%), Postives = 184/313 (58.79%), Query Frame = 0
Query: 317 PMSSYSVPASTASSFS-SSSTMAPSRLPPPKTQARNPPQAEVKSAIRRHLALGPFTSGLEWTMLACMGTAFMSIASMCAESAGFFVGYNDISFPVVGSVNLIDVNIGWNRFSIDLNGAGIIATRSLESISQSAYILGCVTFVLHLLCVGLSLATLGYIYNLRTYGRLSPLGGAYTHTRWLSGLQILLGLGLAGVGCMAFPWYVQKGFTDTF--TPEMDAFHSKVGWAYALTLAVALLCLITGFRLLMGATKMDSIIAWGAGRMREGRRLGDIGRDREERKEEIPMRRPSWNDAGHGRHPP-----PPRPAFLS 622
P +S P+S ASS S + S P R P + A+RRHLALGPFTSGLEWTMLA + T +S A + AE GFF+G+ND + G +NLID++IGWNRFS+D+NG ++ R L SIS+ AY+LGC+TF HLL V LS + +++ +R+ GR+SPL GA+ HTR +SG I L L LAGV C+ F + V + F F P+M+ F K GWAY LT+ V+ LCL+ G RL + A MD ++A A IG + E+ +R+P H PP PPRPAFLS
Sbjct: 48 PATSSVPPSSMASSLSCTPSASLPPRRPDVHRSISGYAHVDAGRALRRHLALGPFTSGLEWTMLAGVATGLLSAACVVAEKHGFFMGFNDFEYTTAGDLNLIDLSIGWNRFSMDVNGMAVVTLRPLSSISRMAYLLGCLTFAGHLLSVCLSAILVSFLHQVRSQGRISPLAGAFVHTRLISGCLIFLSLFLAGVSCIEFRYVVLRDFNAEFRDAPQMEGFRIKPGWAYFLTVTVSALCLLMGGRLGINAGMMDKVLAHAAA----------IGTETED-----SLRKPKRGQVHHFAGPPARSQRPPRPAFLS 345
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00240 ID=NO13G00240|Name=NO13G00240|organism=Nannochloropsis oceanica|type=gene|length=2944bp
CCGCCTGTCCATATGGGGGTAGCCTGCCCGGGGCAGGTTCGTGAGGGAGG
TTTTGCCAGAAGTAGGCCGTCAAAAGGACATGGTCTTATTGTATGCATTC
CTAACCCCTTGAAAGGTCACACTCTGTTCATGGTGGTCACAGAGAGGCTG
CAGCGGTGGAAATATACGCGCATCGAATGTGTCGAGTGGGCTGTTGCAAA
ACCCTGGCAGAGTCCTCCGTCTGCCTTCCTTCTCTTGCAAGTTGCTTCTG
TGATGCTCTGACCACCTGGACATATTTTCATCTGCACTCACAGGCTCACT
TTTTAAACTTTTCAACCAACAAACAGGCGCATCAAGAACTTAAGGCGTAC
CTGCAGCACCATTTCACCACTTTTCGCATCGCGCCTTCTCCTCCTCGCCC
CTCCTCCTCATCCTTTAACACTAAATGCGGAGCACTCCGTCCTTTAACTC
TCCGCCATCTTATGGACACGATAAAGGGCATCACCATCACCCAAAGCCTC
ATCCTCCTCCAATACTGGTTAAAGACAACGATGGCAGCTTTAGCTTAGAC
GGTTCCGAGCTGATAACTCCGCGCACCCAGAAGCGCGTGACGCTCAATGA
CACGCCTATTATCAGCGGACCCGCTTATGCCTTTTTCGCCTCGCCCTCCC
CTCGCCACGAGCCTCCCATGATGAGGCCTGGCTCTTCCTACACGCCTGTT
CCGCCACCCCCCCCAACGCTGCGCCATCACGAAAAGGAAGTCAAAAGCCA
CCGCCGCCCAACATTACCCTCCTCTCTGTAAGCTGGAACCAAAAGAAAGC
TCCACCACACACCATGCCTCCTCAACCCACCTCTCATCCTTCTCCTTCTG
TACCTCCTCGTCGCCCTTCCCGGTATAATATTCCTTCCGTCCAACCTTCT
CCTCGCTCTGCCCTGAAGAAGACGCCTTCCAACTTCTCGCAACACCCCTC
TGCTCAAGCCGTCATGAATAGCGCTCCCATCTCCGCGCCCTCCTACCCTC
CCCCAGGCTCTTCGTCCCTCCCTCCCGCACACAGCACAAGAATATGGGAG
GGCGGAAGCAGCAGCAGTTACCACAAGACCAGTGTCACGGCTGCTGGTGG
GGGTGGGAGCAGTCGACATGGACGCATCGTCTCGCCGAGTACCACGAAAC
CCGTGCCCAGTTCTGCACCTGTGCTGGCGCCGCTACACGAAGGGAATGAA
GGGGAGGAGGACAGTGAATTCGGGAGCAGCGATGGTGGGACGGAGGAGGA
GGAAGAGGGGGTTCAAATGGCTTCGAGACGCTCTTCTATCCCACCACGAC
GCTCCCAACAACAACCCACCCAGCATGCCGCAGTGTTGCCCCCTCGCTCC
TCTTTGCCACCCCGTTCGCAATTTACTGACTCCCCATCGTCCTTGTCCTC
CTCGCCATTACCATCGTGGGTACGGCCCACGGGCCAGCCGCAGAGGCCCC
CGCAGGAACACTTACGGCAACTTGAGAGACTGCCTTCTGGGGTTGAGGCG
GGGGAGAGGGCGGGAAGGAGGACAGGGTGGCAGCAGGACAAAGTAGAGGA
AGCCCCCGACTCGAAGAATGTGCAGGGAGGGCACCACAAGTTAGAGGAGG
TAAACCGCGAAGCCCCTTCTCATCCCAACAGCATCGGCGGTGCTCCGTCT
CTGGCGGCAGCTACTGCAGCTGTGGTGGCGGCCCAGCGCCAGCAGCAACG
CGTAACAGCATTACGAGAAGCCGAACGCGACCGAGAGCGATTGCCTCATC
ACCTTCCCTTGCCCATGTCCTCCTACTCAGTGCCCGCCTCCACCGCTTCC
TCGTTTTCCTCCTCCTCCACCATGGCCCCCTCTCGTCTCCCCCCCCCCAA
AACGCAAGCCCGCAACCCACCGCAAGCCGAGGTGAAGAGTGCTATACGGC
GACACCTGGCACTCGGGCCCTTTACCTCTGGTCTGGAGTGGACTATGCTG
GCCTGCATGGGCACTGCCTTCATGTCCATAGCGTCCATGTGCGCCGAGAG
CGCTGGCTTCTTCGTGGGCTACAATGACATTTCCTTCCCTGTCGTAGGCA
GCGTCAATCTGATCGATGTGAACATCGGCTGGAACCGGTTTTCAATCGAC
CTGAATGGGGCTGGTATCATTGCGACCCGCTCTCTCGAGAGCATTTCCCA
GTCCGCCTACATCCTTGGCTGCGTCACCTTCGTCTTGCACCTCCTCTGTG
TTGGACTCTCCCTCGCGACCCTGGGCTATATCTACAACCTGCGGACGTAC
GGTCGCCTGTCGCCATTGGGAGGGGCCTACACACACACACGCTGGCTTTC
CGGGCTGCAAATACTGCTAGGCTTGGGCCTGGCGGGCGTGGGCTGCATGG
CATTCCCGTGGTATGTCCAAAAAGGGTTCACGGACACATTTACGCCCGAG
ATGGATGCTTTCCACAGTAAAGTTGGATGGGCATATGCGCTGACGCTGGC
AGTTGCGCTCTTGTGTCTGATCACAGGTTTTAGGCTGCTGATGGGCGCCA
CGAAGATGGACTCCATCATTGCATGGGGGGCGGGCAGGATGAGGGAAGGG
AGGAGGTTGGGGGACATTGGCAGGGACAGGGAGGAGAGGAAGGAGGAGAT
ACCGATGAGAAGGCCATCGTGGAATGATGCAGGGCATGGGCGCCATCCGC
CTCCGCCTCGGCCTGCGTTCTTGTCGTCTGTATGAAGAAATAGAAATAGA
AAAAAAACTAATTGTAATATCACTTTGAAAGCATATCAGTCGTGTGGGTA
GGGTAGGCACCAGCGTATGGGGTGGATGTGATGGGAGCAGTCCACCACTG
TCGAGTTTTAAAAGTTCACCGAACGCAAGAAAGTGTGTGGGCGTAAAGGA
AATAATGGCTCATCAAGGCTTTGTATCTCTATTTGTATGTGTATACTTTG
GTTCTCGCATAACAAAAAGAAAAAATGAATGCGACTAAATTGAA back to topprotein sequence of NO13G00240.1 >NO13G00240.1-protein ID=NO13G00240.1-protein|Name=NO13G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=624bp
MPPQPTSHPSPSVPPRRPSRYNIPSVQPSPRSALKKTPSNFSQHPSAQAV
MNSAPISAPSYPPPGSSSLPPAHSTRIWEGGSSSSYHKTSVTAAGGGGSS
RHGRIVSPSTTKPVPSSAPVLAPLHEGNEGEEDSEFGSSDGGTEEEEEGV
QMASRRSSIPPRRSQQQPTQHAAVLPPRSSLPPRSQFTDSPSSLSSSPLP
SWVRPTGQPQRPPQEHLRQLERLPSGVEAGERAGRRTGWQQDKVEEAPDS
KNVQGGHHKLEEVNREAPSHPNSIGGAPSLAAATAAVVAAQRQQQRVTAL
REAERDRERLPHHLPLPMSSYSVPASTASSFSSSSTMAPSRLPPPKTQAR
NPPQAEVKSAIRRHLALGPFTSGLEWTMLACMGTAFMSIASMCAESAGFF
VGYNDISFPVVGSVNLIDVNIGWNRFSIDLNGAGIIATRSLESISQSAYI
LGCVTFVLHLLCVGLSLATLGYIYNLRTYGRLSPLGGAYTHTRWLSGLQI
LLGLGLAGVGCMAFPWYVQKGFTDTFTPEMDAFHSKVGWAYALTLAVALL
CLITGFRLLMGATKMDSIIAWGAGRMREGRRLGDIGRDREERKEEIPMRR
PSWNDAGHGRHPPPPRPAFLSSV* back to top
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