NO13G00200, NO13G00200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00200 vs. NCBI_GenBank
Match: EWM22842.1 (pilus assembly protein [Nannochloropsis gaditana]) HSP 1 Score: 373.2 bits (957), Expect = 8.000e-100 Identity = 209/380 (55.00%), Postives = 233/380 (61.32%), Query Frame = 0 Query: 1 MSSSIVAATAAGA----RDRCVLLRSLYRALSRHGKWFDATPVAKAVIPFPLPFSYQVLLGGHNRDFYGQRLSVQNAIRSGFDSAASGQVQTEMSEELRLDLTLQLARQIGGWRHLLSSSASGI---------------------------------PXXXXXXXXXXXXXXXXFI--------------------------------------------------TYQGVYAEARKHNLRLHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEYLH 294 M++S A AAG+ RD +LLRSLYRA+SRHGKWFDATP+AKAVIPFPLPFSYQVLLGGHNRDFYGQ LSV AIR GF AAS QTE+SEELR+D+TLQLARQ+ GWRHLLSSS+S P F TYQ VY ARKHN +LH ALEKLEEAERLL+ GG++GGV+DRE K LY+ SLAL+PTADA TYLAYLLSYEGA +EAK+ +KEAMK D EFGN+WNDLGLYLWQEG E AL VLAEAK KRRY+ RYKPYLN GHI LELG+P ALVEYLH Sbjct: 1 MTTSKAVAAAAGSVASTRDHGILLRSLYRAMSRHGKWFDATPMAKAVIPFPLPFSYQVLLGGHNRDFYGQNLSVHEAIRCGFGPAASSHAQTEVSEELRIDMTLQLARQLAGWRHLLSSSSSSFSAPLISQATRPLDSLSSSAATAGTESETGGVFHPLTVDVAPYTRELIPAFFFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYQEVYGNARKHNSQLHAALEKLEEAERLLEAGGREGGVIDRERIKSLYQMSLALYPTADARTYLAYLLSYEGALKEAKEELKEAMKQDAEFGNAWNDLGLYLWQEGRREEALKVLAEAKKKRRYQVRYKPYLNSGHIFLELGQPTSALVEYLH 380
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OLC17587.1 (hypothetical protein AUH29_01505 [Candidatus Rokubacteria bacterium 13_1_40CM_69_27]) HSP 1 Score: 109.0 bits (271), Expect = 2.800e-20 Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 0 Query: 157 RALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY 292 RA+E EA R +G D E A LYR S+A+ PTA+AHT+L + S++G EEA +A+++D +FGN +ND+G+YL Q+G+ + A+ L +AKG RYE R PY+N G I ++LGR +AL E+ Sbjct: 9 RAIELWREAYRRQMDG-------DLEAAIELYRRSIAMCPTAEAHTFLGWTYSFQGRLEEATAECLKAIEIDPDFGNPYNDIGVYLMQQGKLDEAVPWLEKAKGAARYEPRQFPYMNLGRIYIKLGRWPDALREF 136
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OLB07964.1 (hypothetical protein AUH14_02270 [Candidatus Rokubacteria bacterium 13_2_20CM_69_15_1]) HSP 1 Score: 105.5 bits (262), Expect = 3.100e-19 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 0 Query: 155 LHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY-LHVRAFPS 300 L RA E +EA +G D E A LY++S+ +HPTA+AHT+L + LS++G EEA + +A+++D +FGN +ND+G YL Q+G+ E A+ L +AK RYE R PY+N G I L R EAL E+ + VR P+ Sbjct: 7 LRRATELWQEAYARQMQG-------DLERAIDLYQQSIDVHPTAEAHTFLGWTLSFQGRLEEATRECLKAIEVDPDFGNPYNDIGCYLMQQGKLEEAIPWLEKAKRAPRYEPRQFPYMNLGRIYLRQARWWEALREFEVAVRLAPA 145
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OLB51727.1 (hypothetical protein AUH99_06855 [Candidatus Rokubacteria bacterium 13_2_20CM_2_70_11]) HSP 1 Score: 105.5 bits (262), Expect = 3.100e-19 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 0 Query: 155 LHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY-LHVRAFPS 300 L RA E +EA +G D E A LY++S+ +HPTA+AHT+L + LS++G EEA + +A+++D +FGN +ND+G YL Q+G+ E A+ L +AK RYE R PY+N G I L R EAL E+ + VR P+ Sbjct: 7 LRRATELWQEAYARQMQG-------DLERAIDLYQQSIDVHPTAEAHTFLGWTLSFQGRLEEATRECLKAIEVDPDFGNPYNDIGCYLMQQGKLEEAIPWLEKAKRAPRYEPRQFPYMNLGRIYLRQARWWEALREFEVAVRLAPA 145
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OGL60359.1 (hypothetical protein A3J27_01385 [Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37] >OGL63914.1 hypothetical protein A3I72_13940 [Candidatus Tectomicrobia bacterium RIFCSPLOWO2_02_FULL_70_19]) HSP 1 Score: 104.8 bits (260), Expect = 5.300e-19 Identity = 62/154 (40.26%), Postives = 88/154 (57.14%), Query Frame = 0 Query: 139 ITYQGVYAEARKHNLRLHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEYL 293 ++++ Y + + N L +AL L EA E G VDR + LY+ SLA HPTADAHTYL ++ S +G EEA + A++ D +FGN +ND+G YL Q GE E+A+ L++AK RY+ R+ PY N I L + +A E L Sbjct: 1 MSFEEKYGDEARANSELRKALALLAEA-----EAAHRAGNVDRAIE--LYKNSLAYHPTADAHTYLGWMYSKQGRLEEAIEECHLAIEADPDFGNPYNDIGCYLMQLGEMEQAIGWLSKAKRAPRYDPRHFPYTNLARIYLRRRQHGKAAGEVL 147
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OGL01046.1 (hypothetical protein A3D33_20895 [Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26] >OGL01769.1 hypothetical protein A3E31_12530 [Candidatus Rokubacteria bacterium RIFCSPHIGHO2_12_FULL_73_22] >OGL07994.1 hypothetical protein A3I14_14840 [Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56] >OGL26232.1 hypothetical protein A3G44_13035 [Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_73_47]) HSP 1 Score: 103.2 bits (256), Expect = 1.600e-18 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 154 RLHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY 292 RL RA E EA R +G D E A LYR S+ HPTA+AHT+L + LS++G +EA + A+++D +FGN +ND+G YL ++ + + A+ L AK RYE R+ PYLN G I L R EAL E+ Sbjct: 5 RLARATELWREAYRHQMQG-------DLEHAIALYRRSIEAHPTAEAHTFLGWTLSFQGRLDEATRECLRAIEVDPDFGNPYNDIGCYLMEQDKLDEAIPWLERAKRAPRYEPRHFPYLNLGRIHLRRSRWWEALSEF 135
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OLD32984.1 (hypothetical protein AUI49_01475, partial [Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13]) HSP 1 Score: 102.4 bits (254), Expect = 2.600e-18 Identity = 56/137 (40.88%), Postives = 85/137 (62.04%), Query Frame = 0 Query: 155 LHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY 292 L RA+E EA R G D + A LYR SLA+ PTA+AHT+L + S++G F++A + +A+K+D +FGN +ND+G+YL Q+G+ + A+ L +AK RYE R P++N G I + G+ +AL E+ Sbjct: 2 LERAIELWREAYRRQMAG-------DLDEAITLYRRSLAVRPTAEAHTFLGWTYSFQGRFDDATEECLKAIKVDPDFGNPYNDIGVYLMQQGKLDEAVPWLEKAKRAPRYEPRQFPFMNLGRIYIRQGQWWQALREF 131
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OGK87657.1 (hypothetical protein A2050_10520 [Candidatus Rokubacteria bacterium GWA2_73_35] >OGK97935.1 hypothetical protein A2W08_18720 [Candidatus Rokubacteria bacterium RBG_16_73_20]) HSP 1 Score: 101.7 bits (252), Expect = 4.500e-18 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 154 RLHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY 292 RL RA+ EA R +G D E A LYR S+ HPTA+AHT+L + S++G +EA + A+++D +FGN +ND+G YL ++ + + A+ L AK RYE R+ PYLN G I L GR +AL E+ Sbjct: 5 RLDRAIGLWREAYRHQMQG-------DLERAIELYRRSIETHPTAEAHTFLGWTFSFQGRLDEATRECLRAIEVDPDFGNPYNDIGCYLIEQDKLDEAIPWLERAKRAPRYEPRHFPYLNLGRIHLRRGRWRDALAEF 135
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OGQ78250.1 (hypothetical protein A3F90_00470 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19]) HSP 1 Score: 101.7 bits (252), Expect = 4.500e-18 Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 155 LHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEYLHVRAFPSSFP 303 L RA++ EA R +G D V LYRES+ HPTA+AHT+L + S++G +EEA + K+A+ +D +FGN +ND+G YL G+ + A+ L +A RRYE+ + P+ N G + L G + AL E+ A ++P Sbjct: 7 LERAVKLFHEAHRRQMQGELDEAV-------RLYRESIHAHPTAEAHTFLGWTYSFQGYYEEAIEECKKAIAVDPDFGNPYNDIGAYLINLGQMDEAIPWLEKAMRARRYEAYHYPHCNLGRVYLAKGMLKRALEEFERALAIEPNYP 147
BLAST of NO13G00200 vs. NCBI_GenBank
Match: OGK80167.1 (hypothetical protein A2X53_21400 [Candidatus Rokubacteria bacterium GWA2_70_23]) HSP 1 Score: 100.9 bits (250), Expect = 7.700e-18 Identity = 56/137 (40.88%), Postives = 82/137 (59.85%), Query Frame = 0 Query: 155 LHRALEKLEEAERLLDEGGKDGGVVDREMAKCLYRESLALHPTADAHTYLAYLLSYEGAFEEAKKGVKEAMKLDKEFGNSWNDLGLYLWQEGEHERALSVLAEAKGKRRYESRYKPYLNCGHILLELGRPEEALVEY 292 L +A + +EA R EG D + +C YR S+ HPTA+AHT+L + LS++G FEEA + A+++D EFGN +ND+G YL + + ++ L +AK +RYE R P++N G I L GR EAL E+ Sbjct: 7 LRQATKLWQEAYRYQMEGELDRAI------EC-YRRSIEAHPTAEAHTFLGWALSFQGRFEEATEECLRAIEIDPEFGNPYNDIGAYLMPRDKLDESIPWLEKAKQAKRYEPRQFPFMNLGQIYLRQGRWWEALHEF 136 The following BLAST results are available for this feature:
BLAST of NO13G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00200 ID=NO13G00200|Name=NO13G00200|organism=Nannochloropsis oceanica|type=gene|length=3781bpback to top protein sequence of NO13G00200.1 >NO13G00200.1-protein ID=NO13G00200.1-protein|Name=NO13G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top protein sequence of NO13G00200.2 >NO13G00200.2-protein ID=NO13G00200.2-protein|Name=NO13G00200.2|organism=Nannochloropsis oceanica|type=polypeptide|length=328bpback to top Synonyms
Publications
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