NO13G00160, NO13G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00160 vs. NCBI_GenBank
Match: EWM22841.1 (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 402.1 bits (1032), Expect = 1.700e-108 Identity = 216/253 (85.38%), Postives = 230/253 (90.91%), Query Frame = 0 Query: 99 HQPVTMSAVAHNSHTASVPAAXXXXXXXXXXXXXTTVAPPEQPVINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIEVVETVERLVDVGCITKADLVRVPVAPDGTMLPTPPPSSPSSSSGIGLADDGGHIQGPNDLIPRR 352 HQ VTMSAVA +SHTASVPA XXXXXXXXXXXX APPEQP+INQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGT+QWALPGGSVEIGEEMLQAAARE+VEETTLDH+ L+FYPRCFMTTDAIYNDDMGAVKYHFVIS MVCWA+PEAAP+AADDAKDIRWMTLPQLR LD +AIFRGV+EVVETVERLVDVGCITKADLVRVPVAPDG+MLP+ PP+ P G+GL DD QG NDLIPRR Sbjct: 149 HQSVTMSAVARDSHTASVPAPPXXXXXXXXXXXXXXXAPPEQPIINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVEVVETVERLVDVGCITKADLVRVPVAPDGSMLPSLPPTPP----GMGLDDDA---QGANDLIPRR 394
BLAST of NO13G00160 vs. NCBI_GenBank
Match: EWM21211.1 (nudix [Nannochloropsis gaditana]) HSP 1 Score: 125.6 bits (314), Expect = 3.200e-25 Identity = 78/178 (43.82%), Postives = 103/178 (57.87%), Query Frame = 0 Query: 139 EQPVINQYPVFPRAAVNI-VVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGA--VKYHFVISQMVCWASPEA--APIAADDAKDIRWMTLPQLRGLDTDAIFRG-VIEVVETVERLVDVGCIT-KADLVRV 310 E+ IN YP+ RAAV + + + Y V+RSKEPG +W+LPGGSVE+GEE L AAARE EET+L L FYP TTDAIY + GA V +H+VI+ W + A A DDA ++ + TL +L+ + + + G V +VV VERLV G I DLVR+ Sbjct: 227 EEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRL 404
BLAST of NO13G00160 vs. NCBI_GenBank
Match: CEM39482.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 124.0 bits (310), Expect = 9.200e-25 Identity = 71/192 (36.98%), Postives = 106/192 (55.21%), Query Frame = 0 Query: 146 YPVFPRAAVNIVVVRARPLNMGR--EYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDA-IFRGVIEVVETVERLVDVGCITKADLVRVPVAPDGTMLPTPPPSSPSSSSGIGL 335 YP + RAAV++ V + + +GR EYL ++R KEP +W+LPGG +++GE L+AAAREL EET L+ + ++ YP F ++DAI D KYH++IS WAS +A P DDA + W T L L + VI +E E+L GC+ ++ V V PT P + +++ + L Sbjct: 57 YPSYARAAVSVAVCKETGV-VGRRPEYLLIRRGKEPSKGKWSLPGGKIDLGETTLEAAARELKEETALNSTDVKLYPDSFYSSDAICFDSRHRCKYHYLISTFYGWASRDAKPRPMDDALEAAWFTKAALDDLHKHGMVDEAVIHAIERGEKLRQSGCLDRSRAVAVEPTSSHAETPTDPKGADETAAPLSL 247
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_005837382.1 (hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712] >EKX50402.1 hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712]) HSP 1 Score: 118.2 bits (295), Expect = 5.000e-23 Identity = 64/153 (41.83%), Postives = 90/153 (58.82%), Query Frame = 0 Query: 150 PRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVK-YHFVISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIEVVETVERLVDVGCI 302 PR+AV + R P + E+L ++R K P +W+LPGGSVE+GE + AA REL EET L + ++F+ FMT+DAI D V +H+VI+Q+ PEA +A DDA D+ W T ++R A+ GV+ VVE E L GC+ Sbjct: 81 PRSAVAVAGCRLLP-SGETEWLLIKRGKPPSYGEWSLPGGSVELGESTIAAARRELCEETRLSSNDVKFFEDSFMTSDAIVKDARSDVTLFHYVIAQLFAEIKPEAQVVAGDDALDVGWFTKEKIRESSFGAVSPGVLRVVERAEELRRAGCL 232
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_005853620.1 (hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526] >EKU22739.1 hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.6 bits (283), Expect = 1.200e-21 Identity = 68/146 (46.58%), Postives = 89/146 (60.96%), Query Frame = 0 Query: 170 YLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGA--VKYHFVISQMVCWASPEA--APIAADDAKDIRWMTLPQLRGLDTDAIFRG-VIEVVETVERLVDVGCIT-KADLVRV 310 Y V+RSKEPG +W+LPGGSVE+GEE L AAARE EET+L L FYP TTDAIY + GA +H+VI+ W + A A DDA ++ + TL +L+ + + + G V +VV VERLV G I + DLVR+ Sbjct: 89 YCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGFLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIEFDLVRL 234
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_009032572.1 (hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens] >EGB12956.1 hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens]) HSP 1 Score: 112.1 bits (279), Expect = 3.600e-21 Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 0 Query: 145 QYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTD 280 +Y + PRAAV + V R Y +QR K PG +W++PGG++E+GEE L A REL EET L V ++ F T+DAIY DD G V++H++I+Q C A+P AA A DDA D +W TL + D Sbjct: 34 EYALTPRAAVAVTVRRP---TSPPSYCLIQRGKPPGEGRWSIPGGALELGEETLAGARRELAEETGLRDGV-SWHGAPFTTSDAIYRDDDGRVRFHYLIAQCFCEAAPTAALAAGDDALDAKWFTLDDVANAGGD 164
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_005761526.1 (hypothetical protein EMIHUDRAFT_105798 [Emiliania huxleyi CCMP1516] >EOD09097.1 hypothetical protein EMIHUDRAFT_105798 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 106.7 bits (265), Expect = 1.500e-19 Identity = 62/142 (43.66%), Postives = 80/142 (56.34%), Query Frame = 0 Query: 146 YPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIE 288 Y PRAAV + V R+ EYL VQR K PG W+LPGG VE+GE AA REL EE L + ++ F TDAIY D GAV++H++I+Q EAA AADDA D RW +L ++ G + + G +E Sbjct: 11 YSSVPRAAVAVAVRRSE--EGPAEYLLVQRGKPPGKGSWSLPGGGVELGETSADAARRELEEECRLSGGAVRWHAGPFTATDAIYRDADGAVQFHYLIAQFYA----EAA--AADDAMDARWWSLAEVAGGEGSGVVAGNVE 144
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_002290167.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91919.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 73/175 (41.71%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 148 VFPRAAVNIVVVRARPL--------NMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD------HSVLEFYPR-CFMTTDAIYNDDMGAVKYHFVISQMVCWASPEAAPI-----AADDAKDIRWMTLPQL-RGLDTDAIFRGVIEVVETVERLVDVGCI 302 V PRAAV+ VVVR P +YL VQR K P W+LPGG +E+GE L AA REL EET L VL++YP F +D+I++ V +H+VISQ C+A E PI A+DDA D RW + ++ RG D A+ +GV+ VVE E L G + Sbjct: 36 VVPRAAVS-VVVRCAPSPSSTSDINKTSPKYLLVQRGKAPNKGMWSLPGGKIEVGEGTLDAAKRELWEETGLSTGHEPKAGVLKWYPHGPFACSDSIHHTKDSGVSFHYVISQ--CFAVIE-VPIPPKVEASDDAMDARWWSSSEMRRGEDDGAVTKGVLRVVERSEVLYSSGLL 206
BLAST of NO13G00160 vs. NCBI_GenBank
Match: OEU22293.1 (hypothetical protein FRACYDRAFT_179351 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 99.0 bits (245), Expect = 3.200e-17 Identity = 59/166 (35.54%), Postives = 95/166 (57.23%), Query Frame = 0 Query: 148 VFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKY--HFVISQMVCWA---------SPEAAPIAADDAKDIRWMTLPQLRGLD-TDAIFRGVIEVVETVERLVDVGCI 302 ++PRAAV V P YL V+R P ++W++PGG +E+GEE L AA RE+ EET + + ++ F+TTD+I D+M + Y H+VI+ C+A SP P +DDA D +W++L +++ L+ ++ + +GVIEV+ E L +G + Sbjct: 2 IYPRAAVAATVQWTNPNTNLYHYLLVKRKNPPAQNKWSIPGGKIELGEETLTAAKREIEEETQIRDCL--WHSNSFLTTDSIVLDEMNSSSYAFHYVIAH--CFAKIPPTSENESPALTP--SDDALDAKWLSLEEIKSLECSEHLSKGVIEVITKAEALSTLGIL 161
BLAST of NO13G00160 vs. NCBI_GenBank
Match: SIS83819.1 (ADP-ribose pyrophosphatase YjhB, NUDIX family [Insolitispirillum peregrinum]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 133 TTVAPPEQPVINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD----HSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVC-WASPEAAPIAADDAKDIRWMTLPQLRGLD 278 T+ AP +++YP P+ AV VVVR L L VQR P W PGG + +GE + A REL EET ++ H L P F + D I D +GAV+YHFV++ ++C W S + +A DDA D W TLP++ LD Sbjct: 27 TSPAPVPSMPVSRYPRGPQPAVLAVVVREERL------LLVQRKNPPDAGCWGFPGGRLMLGETLAAGAVRELREETAVEAVARHGTL---PAAFASLDVIERDIVGAVRYHFVLTAVLCQWQSGDG--VAGDDAADCAWRTLPEILALD 165 The following BLAST results are available for this feature:
BLAST of NO13G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00160 ID=NO13G00160|Name=NO13G00160|organism=Nannochloropsis oceanica|type=gene|length=4757bpback to top protein sequence of NO13G00160.1 >NO13G00160.1-protein ID=NO13G00160.1-protein|Name=NO13G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bpback to top Synonyms
Publications
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