NO13G00050, NO13G00050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00050 vs. NCBI_GenBank
Match: EWM22867.1 (intraflagellar transport particle protein ift140 [Nannochloropsis gaditana]) HSP 1 Score: 388.7 bits (997), Expect = 4.700e-104 Identity = 220/435 (50.57%), Postives = 276/435 (63.45%), Query Frame = 0 Query: 395 MRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVS----XXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLE----GETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDKAEE 822 M FAGL Y++ + A++ LKAFH+ L +QDWHAAHQ+L+ + Q+Q + + L+C+WRNMA L L+ R V+VAE CL +MGH+RG+ AVREAVS QLGLL+EAAALY +AKRFDLLNRM+QAAG+WE AL+VA+ +DR +LR THF+YAR+LE EW+KAI+HYEKAGAQAREV RML K GK+ +LE Y+ LW+WWG+YCESK D++ A EAY A+DLVALVRLACVAQDV AEALL+ G +G+I R+ + A+ AASYHLARHYEGAL+D+LPAL HYARAGCF+HC+RLA AHELD DVM +ALQS LM+ SA+YF Q ERA+EL+ KA + Sbjct: 1 MPSFAGLSYENFSLHAKSCLKAFHFQLFSQDWHAAHQSLRIIFPQRQPDSKAGKKCQNEEPNDH-NQQLRKEGNCKQQLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLS----------RQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASN-------HAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARK 417
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_009036412.1 (hypothetical protein AURANDRAFT_71429 [Aureococcus anophagefferens] >EGB09316.1 hypothetical protein AURANDRAFT_71429 [Aureococcus anophagefferens]) HSP 1 Score: 272.3 bits (695), Expect = 4.900e-69 Identity = 249/877 (28.39%), Postives = 366/877 (41.73%), Query Frame = 0 Query: 50 LVELSLDQVFLTGKNTAGPGATHCVEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLS--------LPEEKEE--------EKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPS---------------------------------FSPLPARLCIYDVDRDVAHAVSCLTTAAASPTTHMWDAEDPKFLVC-------IYT--TNTFTSPIVNARDTSKK----------------KTETKK--------KEGNEDAG---VVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYF--ISSSPNLSTSNIPPSSL--------------MLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETA-EALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDKAEEKVK 825 +++LS D V + +N A T L I+ + VW+ + RVY + + + P A+AL +F A N V++ ++G + + FS EG P LDV G+ LAVATD ++K+F + + P+Q S GH LP +E + E +G + SI NAD TRVS + + S +RL +YD +RD+ + P +H WD +PK L C ++T TN+ + + +TSKK ET+ ++ E+AG V TL V+ + + +T PL PPL LLGVQ P +F +P L + + + R MRDF GL D + ++AL F ++L + AH+A++ + VW NMA +C++T+ +DVAE+CLGHMGH RG AVR + QLGL +AA LY + +RFDLLN ++QAAG+WE AL A DR +LR TH YAR LE ++ A H+E A REV RML+ G+ A LE YV L +WW YCES G + A YE+A D +LVR+AC + + A E + E +T G +YHLARH EG DI A+ ++A++GC+ H +RLA ++LD D++ F++++ L A YF +G+ E+A +L K E K Sbjct: 753 VIQLSTDTVRVERQNGASVLLT---TDLSIRGLAVVVWNGQEARVYEWSDEMGDAKPIETARFPTTARAIALRDETIFR--ASNNLVELCN-------LQGIVRQK------ITFSEGEGSPTHLDVNGDYLAVATDTGLIKIFQVTRR-EPKQLGSPGHFHLWAQAQNFLPSNTDESVHPPGSSKGRSTEESARGHAIRSIRCNADGTRVSILADHVCSSEVDNEVCSTREGALRELTLCVSVSKVHGVSVRIREPDSRLHVYDSERDIVDSHD-FVDVRHYPVSHYWDPLEPKLLACETRRMRILHTSITNSNGNLRLAEHETSKKYFPLGLHEGKISTPSDSAETRSSALQRKLARKVTEEAGPLMEVTTLFVTAEYG-ILLQDTFPLEPPLEALLGVQVPRLFFTRCGGAPTLEAGDADAEDMNVNTSGCEAGGNVGLCGRVMRDFVGL--DDADARTRSALLDFSFYLTVGNMDEAHRAVRLIKSPS-----------------------------------VWENMAHMCVKTKRLDVAEVCLGHMGHARGAAAVRATKN---------DVIELEARVASVAVQLGLRNDAARLYRECRRFDLLNELYQAAGEWELALDTAAHSDRIHLRSTHHRYARHLEALGSYDGAARHFELADTHRREVPRMLVARGEQAALEHYVMRAND--------------------AELLKWWAGYCESLGHLDSAQHCYESAGDHYSLVRVACFSNETNRASEIVHESRSTAG-----------------------AYHLARHLEGR-GDINEAIQYFAKSGCYNHAIRLARQYQLDTDLLQFSIKA-RPSLQVDCANYFEQKGEFEKAVQLYQKGGELAK 1517
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_005855058.1 (intraflagellar transport 140-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21303.1 intraflagellar transport 140-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.1 bits (684), Expect = 9.200e-68 Identity = 147/263 (55.89%), Postives = 180/263 (68.44%), Query Frame = 0 Query: 563 QAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLE----GETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDKAEE 822 QAAG+WE AL+VA+ +DR +LR THF+YAR+LE EW+KAI+HYEKAGAQAREV RML K GK+ +LE Y+ LW+WWG+YCESK D++ A EAY A+DLVALVRLACVAQDV AEALL+ G +G+I R+ + A+ AASYHLARHYEGAL+D+LPAL HYARAGCF+HC+RLA AHELD DVM +ALQS LM+ SA+YF Q ERA+EL+ KA + Sbjct: 1 QAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLS----------RQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGGLHQGEISWRQASN-------HAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARK 246
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_009039874.1 (hypothetical protein AURANDRAFT_30803 [Aureococcus anophagefferens] >EGB05492.1 hypothetical protein AURANDRAFT_30803 [Aureococcus anophagefferens]) HSP 1 Score: 261.5 bits (667), Expect = 8.600e-66 Identity = 234/802 (29.18%), Postives = 350/802 (43.64%), Query Frame = 0 Query: 50 LVELSLDQVFLTGKNTAGPGATHCVEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPLPARLC------IYDVDRDV-AHAVSCLTTAAASPTTHMWDAEDPKFLVCIYTTNTFTSPIVNARDTSKKKTETKKKEGNEDAGVVI---TLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYF--ISSSPNLSTSNI-------------PPSSL-MLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDV-ETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDKAEEKVK 825 +++LS D V + +N A T L I+ + VW+ + RVY + + + P A+AL LF A N V++ ++G + + FS EG P LDV G+ LAVATD ++K++ + + P+Q S G LS E +G + SI NAD TRVS + + S S + +C + ++++ V VS S D+ K+ + P +A S ++ E+AG ++ TL V+ + + +T PL PPL LLGVQ P +F +P L + P ++ + R MRDF GL D + ++AL F ++L + AH+A++ + VW NMA +C++T+ +DVAE+CLGHMGH RG AVR + QLGL +AA LY + +RFDLLN ++QAAG+WE AL A DR +LR TH YAR LE ++ A H+E A REV R+L+ G+ A LE YV L +WW YCES G + A YE+A D +LVR+AC + + AE + E +T G +YHLARH EG DI A+ ++A++GC+ H +RLA ++LD D++ F++++ L A YF +G+ E+A +L K E K Sbjct: 411 VIQLSTDTVRVERQNGASVLLT---TDLSIRGLAVVVWNGQEARVYEWSDEMGDAKPMETARFPTTARAIALREETLFR--ASNNLVELCN-------LQGIVRQK------ITFSEGEGSPTHLDVNGDYLAVATDTGLIKIYQVTRR-EPKQLGSPG-LSAEES-----------ARGHAIRSIRCNADGTRVSILADHVRS-SEVDNEVCRTGEGALRELEKLVWTLCVSVSKVHGVSVRIREPDSRLHKYFPLCLHEGKISGPNDSAETRSSVLQRKLARKVTEEAGPIMEVTTLFVTAEYG-ILLQDTFPLEPPLEALLGVQVPRLFFTRCGGAPTLEAGDADAEEGNVNKNIGEPADNVGLCGRVMRDFVGL--DDADARTRSALLDFSFYLTVGNMDEAHRAVRLIKSPS-----------------------------------VWENMAHMCVKTKRLDVAEVCLGHMGHARGAAAVRATKN---------DVIELEARVASVAVQLGLRNDAARLYRECRRFDLLNELYQAAGEWELALDTAAHSDRIHLRSTHHRYARHLEALGSYDGAARHFELADTHRREVPRVLVARGEQAALEHYVMRAND--------------------AELLKWWAGYCESLGHLDSAQHCYESAGDHYSLVRVACFSNETNRAAEIVHESRSTAG-----------------------AYHLARHLEGR-GDINEAIQYFAKSGCYNHAIRLARQYQLDTDLLQFSIKA-RPSLQVDCANYFEQKGEFEKAVQLYQKGGELAK 1088
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_007423902.1 (PREDICTED: intraflagellar transport protein 140 homolog [Python bivittatus]) HSP 1 Score: 252.3 bits (643), Expect = 5.200e-63 Identity = 216/780 (27.69%), Postives = 335/780 (42.95%), Query Frame = 0 Query: 74 VEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPLPARLCIYDVDRDVA-----------HAVSCLTTAAAS---------------PTTHMWDAEDPKFLVCIYTTNTFTSPIVNARDTSKKKTETKKKEGNED-AGVVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFISS-----SPNLSTSNIPPSSLMLKRTMRDFAGL-EYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQE-ERARELLDKA 820 V G+ + +A W+ V ++ +T S S P+ LA+H L+ N+V + R +G + FS EG P FLDV GN L V TD K+F L + SS L + + + S+ NA +VS +LS + L R+C YD++ DV A L+ + PT+H WD +P+ +C T P + D KK+E E+ V+I S + + ++ PL LLG++ PH+YF + +P ++ +R MRDF GL E D +T A+ F ++L D A +++K + + VW NMAR+C++T+ +DVA++CLG+MGH RG A+REA QLG+L++A LY Q KR+DLLN+ +QA+ QW+ A+ +A+++DR +LR T++ YA+ LE E AI +YEK+ EV RML + + LE YV LW+WW +Y E + D+ A + YE A D ++VR+ C +++ A ++ + N AASYH+AR YE + DI A+ Y RA F + +RL ++LD +M+ AL S E ++ ++ARY+ G+G++ +RA L KA Sbjct: 446 VNGVCATKEAVAFWNGKQVSIFELSAATLRNS--GSFLCESPV--LAMHEENLY--TVEPNRVQV-------RTWQGTVK------QLLSFSESEGNPCFLDVCGNYLTVGTDLSHFKIFDLSRREAKVHCSSKALADL-------------IPGALGIASVKCNASGNKVSILLSK--ADGSLDPRICFYDIETDVVTLFDFESGRQKEAKEVLSFGQEAEGKNISVYPELCDRIPTSHFWDQNEPRLFIC----ETVLDPNQQSLD--------KKQESLENLMNVLIVSFFSTEEHGLLLQDSFPLPSTYQSLLGMEVPHYYFAKKPEAERKDEVEPGIVPQYQMVARRPMRDFIGLEECDKMTCE---AMLNFSFYLTIGDMDEAFKSIKLIKSE-----------------------------------AVWENMARMCVKTQRLDVAKVCLGNMGHARGAKALREA----------EQEPEQEARVAMLAIQLGMLEDAEQLYKQCKRYDLLNKFYQASDQWQKAIEIAESQDRVHLRTTYYNYAKHLEAIAERNLAITYYEKSDTHKFEVPRMLSE--DLQALESYVNRMKD--------------------KGLWKWWAQYLEGQADLEAAFKYYELAQDYFSMVRIHCFLGNIQKA----------------------AEIANATGNWAASYHVARQYE-SREDIKQAVHFYTRAQAFNNAIRLCKENQLDDQLMNLALLSSPEDMI-EAARYYEGKGEQMDRAVMLYHKA 1085
BLAST of NO13G00050 vs. NCBI_GenBank
Match: OQR87348.1 (Intraflagellar Transport protein [Achlya hypogyna]) HSP 1 Score: 251.1 bits (640), Expect = 1.200e-62 Identity = 190/671 (28.32%), Postives = 302/671 (45.01%), Query Frame = 0 Query: 160 SAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPL---PARLCIYDVDRDVAHAVSCLTTAAASPTTHMWDAEDPKFLVCIYTTNTFTSPIVNARDTSKKKTETKKKEGN--------EDAGVVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFISSSPNLSTSNIP-PSSLMLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDK 819 + + F+ EG P L V LAV TD VL++F L + P+ + S G++ +G G+ + TL S+ +N D TR++F++ ++ + ++ +++ D +V + C P H WD ++P+ L C TF + +A+ T+ + K +G+ A I +L + + + + L LLG+ P Y S+ P +L+ + MRDF GL D + + AL F Y + + A++++K + VW NMA +C++T+ +DVA++CLGHMGH RG AV A S QLGL EAA LY +A RFDLLN+++QAAG W A+ VA DR +L+ THF YA+ LE ++A+ H+E AG A+++ RML +GK+ L+ Y AL WW +Y ES + A Y A D+++LVR+ C +D + A ++ + NRAA+YHLAR +E A ++ A+ YA +G + H +RL+ H LDGD+M +AL S ++ + A+YF + + E+A L K Sbjct: 477 NTLSFTEAEGKPFLLHVNNKFLAVGTDTGVLRVFDLSRR-EPKAFGSMGNI---------MKGLSGMNEKSTLHSLSVNCDGTRIAFLVDAVEGTMKVRIPHTKVYLFNTDLNVFQSYDC--GPVRHPVAHFWDPQEPRLLAC----ETFHAKHDDAKSTTTELMAAAKADGDGYDATRLASQAEKEILILFASNERGLLMQDNFDLDVKYSALLGMHVPRLYLGSNQDARDAKEADGPVALLRSKIMRDFVGL--DRVDEPTRQALIDFSYFMTIGNMDEAYRSVKLI-----------------------------------QNTSVWENMAHMCIKTKRLDVAQVCLGHMGHARGAAAVDAAAS---------PGVAVEVPIAMVAIQLGLRDEAARLYKEAGRFDLLNKLYQAAGFWAKAIEVAAKRDRIHLKSTHFAYAKHLEEEGNLKEAMRHFELAGTAAKDIPRMLFSLGKLEMLDSYASKTDD--------------------PALLLWWAQYQESNHEFDAAAVCYRRAKDILSLVRVLCFKKDFDAAAQVI----------------------ANTGNRAAAYHLARQFE-AHDEVGRAIQFYATSGSYGHAIRLSREHNLDGDLMQYALLSKPGPML-ECAQYFEAKREFEKAVALYHK 1041
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_012208438.1 (hypothetical protein SPRG_14091 [Saprolegnia parasitica CBS 223.65] >KDO20860.1 hypothetical protein SPRG_14091 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 244.6 bits (623), Expect = 1.100e-60 Identity = 189/670 (28.21%), Postives = 297/670 (44.33%), Query Frame = 0 Query: 164 FSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPL---PARLCIYDVDRDVAHAVSCLTTAAASPTTHMWDAEDPKFLVC----IYTTNTFTSPIVNARDTSKKKTETKKKEGNEDAGVV-------ITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFISSSPNLSTSNIP-PSSLMLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDK 819 F+ EG P L V LAV TD ++++F L + + + S G++ +G G+ + L S+ +N D TRV F++ + + ++ +++ D +V + C P H WD ++P+ L C PI + D + K + +G DA + I +L + + + + L LLG+ P Y S+ + + P +L+ R MRDF GL D + + AL F Y + + A++++K + VW NMA +C++T+ +DVA++CLGHMGH RG AV A QLGLL +AA LY ++ RFDLLN+++QAAG W A+ VA DR +L+ THF YA+ LE + A+ H+E AG A+++ RML +GK+ L+ Y AL WW +Y ES + A Y A D ++LVR+ C +D + A G+I+ + NRAA+YHLAR +E A ++ A+ YA +G + H +RL+ H LDGD+M +AL S ++ + A+YF +G+ E+A L K Sbjct: 484 FTGAEGKPTLLHVNNKFLAVGTDTGLIRVFDLSRKNL-DAFGSMGNM---------MKGLPGMSENSMLHSLSVNCDGTRVIFLVDGVEGTLRVRIPHTKVYLFNTDLNVFQSFDC--GPVRYPVAHFWDPQEPRLLACETFHAKLDEQSAKPISSRDDVAPAKND---GDGGADATRLPSSAEKEILILFASNERGLLMQDNFDLDAKYSALLGMHVPRLYLSSNQDSRDAKDADGPVALLRSRIMRDFVGL--DRVDEPTRQALIDFSYFMTVGNMDEAYRSVKLI-----------------------------------QNASVWENMAHMCVKTKRLDVAQVCLGHMGHARGAAAVDAAA---------RPMAPVEVPIAMVAIQLGLLDDAARLYKESNRFDLLNKLYQAAGFWSKAIEVANKRDRIHLKSTHFAYAKHLEDEGNLKDAMRHFELAGTAAKDIPRMLFGLGKLEMLDTYASKTDD--------------------PALLLWWAQYQESNHEFDAAAVCYRRAKDYLSLVRVLCFKKDFDAA----------GQIV------------ANTNNRAAAYHLARQFE-AHDEVGKAIQFYALSGSYGHAIRLSREHNLDGDLMQYALLSKPGPML-ECAQYFEAKGEHEKAVALYHK 1048
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_017923067.1 (PREDICTED: intraflagellar transport protein 140 homolog [Manacus vitellinus]) HSP 1 Score: 243.4 bits (620), Expect = 2.400e-60 Identity = 221/791 (27.94%), Postives = 334/791 (42.23%), Query Frame = 0 Query: 65 TAGPGATHC------VEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPLPARLCIYDVDRDVA------------------------HAVSCLTTAAASPTTHMWDAEDPKFLVCIYTTNTFTSPIVNARDTSKKKTETKKKEGNEDAGVVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFISSSPNLSTSNIPPSSLML-----KRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQE-ERARELLDKA 820 T GATH V G+ D L W+ V V+ G T + S P+ L++HG L+ V+ YR + R +G + FS EG P LDV GN LAV TD LK+F L + +S K+ + + + S+ NA+ ++VS ++S + + +++C YDV+ D + + P H WD +P+ VC P + + + +KK +T EG D V I + + + ++ PL LLG++ PH+YF + P S M+ +R MRDF GL + Q A+ F ++L D A +++K + + VW +MAR+C++T+ +DVA++CLGHMGH RG A+REA QLG+L++A LY RFDLLN+ +QA+ QW+ AL A+ +DR +LR TH YA+ LE A E A+ HYEK+ EV RML + + LE YV +LW+WW +Y ES+ D+ A + Y A D +LVR+ C +++ A ++ N AASYHLAR YE + DI A+ Y RA F + +RL A+ LD +M+ AL S E ++ ++A Y+ +G++ +RA L KA Sbjct: 432 TFSTGATHSLRVDMNVNGVFATKDALVFWNGKQVTVFECSGDTFRSA--GSFLCDSPV--LSVHGESLY-------TVEPYR--VQVRTWQGTVK------QLLVFSEAEGSPCLLDVCGNFLAVGTDLAHLKIFDLSRREAKVHCNS-------------KDLSQLLPDRGGIASVKCNANGSKVSILVSK--ADGNIDSKICFYDVEMDKVTLFDFNAEQGDGGEKLSAGQGIGKSVLEYPELHSHIPVCHFWDQSEPRLFVC------EAIPEMGLQSSDQKKNQT---EGTMD--VWIISFFNTEEHGLLLQDSFPLPSSYEVLLGIEVPHYYFAKKLGDSEKGAPEPGSAMVSQMVARRPMRDFIGL--GDCDKTTQDAMLNFSFYLTAGDMDEAFKSIKLIKSE-----------------------------------AVWESMARMCVRTQRLDVAKICLGHMGHARGAKALREA----------EQEPEPEARVAVLAIQLGMLEDAERLYKACGRFDLLNKFYQASNQWQKALETAEAQDRVHLRTTHCNYAKHLEAAGEQSLALAHYEKSDTHRFEVPRMLSE--DLQALENYVNKMKD--------------------KSLWKWWAQYLESQSDLESALQYYALAQDYFSLVRVHCFQGNIQKA----------------------AEIANKTGNWAASYHLARQYE-SQEDIKQAVHFYTRAQAFNNAIRLCKANNLDDQLMNLALLSSPEDMI-EAACYYEEKGEQMDRAVMLYHKA 1084
BLAST of NO13G00050 vs. NCBI_GenBank
Match: XP_017664320.1 (PREDICTED: intraflagellar transport protein 140 homolog isoform X2 [Lepidothrix coronata]) HSP 1 Score: 242.7 bits (618), Expect = 4.100e-60 Identity = 222/793 (27.99%), Postives = 337/793 (42.50%), Query Frame = 0 Query: 65 TAGPGATHC------VEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPLPARLCIYDVDRDVA------------------------HAVSCLTTAAASPTTHMWDAEDPKFLVCIYTTNTFTSPIVNARDTSKKKTETKKKEGNEDAGVVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFI-------SSSPNLSTSNIPPSSLMLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQE-ERARELLDKA 820 T GATH V G+ D L W+ V V+ G T + S P+ L++HG L+ V+ YR + R +G + FS EG P LDV GN LAV TD LK+F L + +S ++ + G G+ S+ NA+ ++VS ++S + + +++C YDV+ D + + P H WD +P+ VC P + + +KK +T EG D V I S + + ++ PL LLG++ PH+YF +P ++ + S ++ +R MRDF GL + Q A+ F ++L D A +++K + + VW +MAR+C++T+ +DVA++CLGHMGH RG A+REA QLG+L++A LY RFDLLN+ +QA+ QW+ AL A+ +DR +LR TH YA+ LE A E A+ HYEK+ EV RML + + LE YV +LW+WW +Y ES+ D+ A + Y A D +LVR+ C +++ A ++ N AASYHLAR YE + DI A+ Y RA F + +RL A+ LD +M+ AL S E ++ ++A Y+ +G++ +RA L KA Sbjct: 432 TFSTGATHSLRVDMNVNGVFATKDALVFWNGKQVTVFECSGDTFRSA--GSFLCDSPV--LSVHGESLY-------TVEPYR--VQVRTWQGTVK------QLLVFSEAEGSPCLLDVCGNFLAVGTDLAHLKIFDLSRREAKVHCNS-------KDLSQLLPGRGGI------ASVKCNANGSKVSILVSK--ADGNIDSKICFYDVEMDKVTLFDFNAEQGDGGEKLSAGQGIGKSVLEYPELRSHIPVCHFWDQSEPRLFVC------EAIPETGLQSSDQKKNQT---EGTMD--VWIISFFSTEEHGLLLQDSFPLPSSYEVLLGIEVPHYYFAKKLGDSEKGAPEPGSATV--SQMVARRPMRDFIGL--GDCDKTTQDAMLNFSFYLTAGDMDEAFKSIKLIKSE-----------------------------------AVWESMARMCVRTQRLDVAKICLGHMGHARGAKALREA----------EQEPEPEARVAVLAIQLGMLEDAERLYKACGRFDLLNKFYQASNQWQKALETAEAQDRVHLRTTHCNYAKHLEAAGEQSLALAHYEKSDTHRFEVPRMLSE--DLQALENYVNKMKD--------------------KSLWKWWAQYLESQSDLESALQYYALAQDYFSLVRVHCFQGNIQKA----------------------AEIANKTGNWAASYHLARQYE-SQEDIKQAVHFYTRAQAFNNAIRLCKANNLDDQLMNLALLSSPEDMI-EAACYYEEKGEQMDRAVMLYHKA 1084
BLAST of NO13G00050 vs. NCBI_GenBank
Match: GBG32279.1 (Intraflagellar transport protein 140-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 242.7 bits (618), Expect = 4.100e-60 Identity = 228/816 (27.94%), Postives = 345/816 (42.28%), Query Frame = 0 Query: 74 VEGLKIQDDMLAVWSLHDVRVYRFYGSTTSPSLVASLTVPKPIAALALHGSVLFMALAGENKVDIYRDLLARRAMKGEAAAESRPCSAVPFSAKEGCPLFLDVRGNVLAVATDRRVLKLFSLDKSGMPQQWSSFGHLSLPEEKEEEKEGDEGVKKGMTLTSIHLNADATRVSFVLSSIPSFSPL---PARLCIYDVDRDVAHAVSCLTTAAASPTTHMWDAEDPKFLVC-----IYTTNTFTSP-----------------IVNARD--------------------------------------------TSKKKTETKKKEGNEDAG--VVITLLVSPDAAKVTCLETSPLSPPLGDLLGVQAPHFYFISSSPNLSTSNIPPSSLMLKRTMRDFAGLEYDSLTSSAQAALKAFHYHLLTQDWHAAHQALKSVSIQQQRQMXXXXXXXXXXXXXXCSXTGXXXXXXXKHLVCVWRNMARLCLQTRCVDVAELCLGHMGHVRGLTAVREAVSXXXXXXXXXXXXXXXXXXXXXXXQLGLLKEAAALYTQAKRFDLLNRMFQAAGQWEDALRVAQTEDRFNLRRTHFEYARQLEGAREWEKAIWHYEKAGAQAREVSRMLLKVGKMAELEMYVKXXXXXXXXXXXXXXXXXXXXXXXRTALWQWWGKYCESKGDIRGATEAYENASDLVALVRLACVAQDVETAEALLEGETTKGKILPREKHHPLTKLPVSAVNRAASYHLARHYEGALHDILPALAHYARAGCFQHCLRLAMAHELDGDVMHFALQSDSERLMRQSARYFSGRGQEERARELLDK 819 ++GL + D VWS VY F + +AS T MAL GE + L+ ++G + AE V FS EG P F+ + G LAVAT + +LK+F + + +S K + G + V G + SI NAD TRVS VL I L R+ +++++RD A T P +H WD ++PK L C + N+F IV D K +T + + G+ + V+TL + + V + PL L LLG++ P +FIS +P + RTMRDF GL+ + + AL F Y+L + A++A+K + V VW NMA +C++TR +DVAE+C+G+MGHVRG A+RE+ QLGLL++A LY + R+DLLN+M + +GQW +L VA + DR +LR +HFEY R LE +++ AI +YE +G ++V RML + ++ ELE Y++ L +WWG YCES G+ + Y+ ASD ++LVR+ CV ++ + A ++ +++ N AASYHLAR E +I A+ Y+RAG + H +RLA L+ D+++ AL++ S+ M ++ARY +G E A L K Sbjct: 479 IKGLDVNDSHALVWSQRKAEVYAFQDNRM--ERIASFTTRAEA-----------MALYGETILQTEGSHLSVCNLQGVSRAE------VSFSEHEGEPRFMHINGKYLAVATHKGMLKVFDVSRREPRPVGGGAWFVSSARSKGGKPLGKQ-VPIG-EIRSIRCNADGTRVS-VLCDIVRGQHLREPDTRIHVWNLNRDEFQAYEFGPT--RYPVSHFWDGQEPKLLACEAKRLRKSVNSFEEASDAKVKSSKELKGSRLRIVGDEDEDLGDLRRGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQKMRTALRARNGSAEIAEVEVVTLFATEERVGVMMQDAFPLEGNLEALLGMRVPRLFFISKPS--ENGGVP---RLKGRTMRDFVGLD-QRVDDETKRALIDFSYYLTIGNMDEAYRAVKLID-----------------------------------NVSVWENMAHMCVKTRRLDVAEMCMGNMGHVRGAQALRES----------KREPEVEARIATVAIQLGLLEDAERLYIECGRYDLLNKMLRHSGQWTKSLEVANSFDRIHLRESHFEYGRHLESMGDFKAAIANYEASGTHRKQVPRMLFEAERLDELESYIQTQCD--------------------EELTKWWGHYCESLGEYDRSIRVYQRASDDLSLVRVHCVMENFKAA----------------------AEIALNSTNLAASYHLARQCE-QRGEINEAIQFYSRAGRYNHAVRLAKERGLNADIVNLALRA-SKTTMVEAARYLEAKGFNEDAVVLYQK 1175 The following BLAST results are available for this feature:
BLAST of NO13G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00050 ID=NO13G00050|Name=NO13G00050|organism=Nannochloropsis oceanica|type=gene|length=2490bpback to top protein sequence of NO13G00050.1 >NO13G00050.1-protein ID=NO13G00050.1-protein|Name=NO13G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=830bpback to top Synonyms
Publications
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