NO12G03770, NO12G03770 (gene) Nannochloropsis oceanica

Overview
NameNO12G03770
Unique NameNO12G03770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1612
Alignment locationchr12:1053765..1055376 +

Link to JBrowse

Properties
Property NameValue
DescriptionNicotinamide N-methyltransferase, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:1053765..1055376 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019410Nicotinamide_N-MeTfrase-like
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
GO:0018022peptidyl-lysine methylation
Vocabulary: Molecular Function
TermDefinition
GO:0018025calmodulin-lysine N-methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO12G03770 vs. NCBI_GenBank
Match: EWM25663.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana])

HSP 1 Score: 119.0 bits (297), Expect = 3.200e-23
Identity = 71/166 (42.77%), Postives = 87/166 (52.41%), Query Frame = 0
Query:  199 VCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEGGWEVVWEGERGGMQTGGDDCDYVESAPLQLLKLR 365
            VCLTDGH  C+SSLR+C+  N+        V+  +L+W +           T      L + H             FDLIV ADVLFFERFH ALL TL  +L+P GGE W LQPSRGGSLERF++  +E+GGWE       G   +   D        L LLKLR
Sbjct:   72 VCLTDGHSACVSSLRRCLERNQASFSPHISVQAHQLLWTD-----------TIGSPPNLLEGHKPAS---------FDLIVGADVLFFERFHDALLKTLSVYLNPAGGEVWLLQPSRGGSLERFVSRSQEQGGWEASHTNVVGHRHSPDTDA-------LVLLKLR 210          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: GAX94347.1 (Hypothetical protein PINS_002244 [Pythium insidiosum])

HSP 1 Score: 105.9 bits (263), Expect = 2.800e-19
Identity = 80/250 (32.00%), Postives = 112/250 (44.80%), Query Frame = 0
Query:   86 LAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQT----GIRRRPRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTR--LPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEE 330
            LA L SH+  N GVDNTGN+R WP+E  LL  LLK  + RQ        RR  R  ELG+G  G++GLGL MA  G  ++                                     + +TDG+P  + +L+ CV  N  +  +P   +  VQ  + + + +    D   +Q                       FDL+VA D LFFE FH  L  T+H  L PE G    +QP R GS+ERF+A+ +++
Sbjct:  112 LAELFSHQLNN-GVDNTGNIRTWPSEPILLSYLLKNNVCRQLADAHAPSRRAIRCCELGSGMAGVVGLGL-MAHEGALIDS------------------------------------MLITDGNPSAVRNLQICVDENIAQGVIPRDRRDAVQAKLLRWDRDVRFDDAMQSQ-----------------------FDLVVAGDCLFFEEFHVDLASTIHQLLRPETGRCLLMQPRRNGSMERFVAVARQQ 300          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: XP_008609102.1 (hypothetical protein SDRG_05178 [Saprolegnia diclina VS20] >EQC37582.1 hypothetical protein SDRG_05178 [Saprolegnia diclina VS20])

HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18
Identity = 103/323 (31.89%), Postives = 146/323 (45.20%), Query Frame = 0
Query:    6 PRPSKAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFH---LPCPSTSSPLPLTIALQLITPSPPSTLSSACPLSSPLAALVS-HRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRRPRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIA 325
            P    ++ARW LLR+AI+ +A + +PASS++         + FH   +P P+  +     +    +  + PS  +S         A VS H      VDNTGN+R WP+E+  L  LL+  L  +TG    P R+LELGAG  G+ G  LA A                               S+ V S       V +TDG+  C+ +L +  ++N++RL  G  VE   L W                        H    S        FD+IVA+D +FFE +H  LLHTL T L  + G A F+QP+RGGSL+RF+A
Sbjct:    5 PAGKTSKARWALLRRAIV-TASTPAPASSAM-------SIFQFHDPAVPRPTVYAGATPDVGYDWVEYTLPSGGASILLHQRRETAHVSLHELAIRDVDNTGNIRTWPSEDIALRYLLRT-LPSRTG---GPARVLELGAGMCGVAGFALAAA-----------------------------CASDVVAS-------VTITDGNQMCVENLTRIASMNRSRL--GRPVETALLQW----------------------SRHLSPPS-----SPLFDVIVASDCVFFEAYHDDLLHTLRTLLAVD-GVATFVQPTRGGSLDRFLA 249          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: XP_009836001.1 (hypothetical protein H257_10934 [Aphanomyces astaci] >ETV74343.1 hypothetical protein H257_10934 [Aphanomyces astaci])

HSP 1 Score: 99.8 bits (247), Expect = 2.000e-17
Identity = 100/330 (30.30%), Postives = 133/330 (40.30%), Query Frame = 0
Query:   10 KAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLPCPST--SSPLPLTIALQ---LITPSPPSTLS-----SACPLSSPLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRRPRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGA-KVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKE 329
            +A+ RW  LR AI          +S+  PH     +     P  ST  S   P     +      P PP  LS       C +S    A+ S       VDNTGN+R WP E+ L  +L+ K  D        PRR+LELGAG  G+ GL LA              P T I+                         +V +TDG+  C+ +LR  V  N  +    A  V  + L W                            ++      +PFD+++A+D LFFE FH  L+HTL     P  G  + LQPSRGGSLERF+AL +E
Sbjct:    8 QAKTRWARLRSAIRKHV-----ENSTTDPHPPSAMSMFSFYPVASTLLSDRPPFHRDYEWRRYPLPRPPHHLSLHARKEQCTISVHELAVQS-------VDNTGNIRTWPCEDLLWRVLIDKFPDTAP-----PRRVLELGAGMCGVAGLALAC-----------QLPATSIS-------------------------HVVVTDGNASCVENLRLNVEANIAQGHLRAHSVTAELLAW---------------------------SRAMLPVAADPFDVVIASDCLFFESFHVDLVHTLCQVTRPRTGVIYLLQPSRGGSLERFVALAQE 257          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: XP_024586678.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG50309.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 99.8 bits (247), Expect = 2.000e-17
Identity = 97/349 (27.79%), Postives = 143/349 (40.97%), Query Frame = 0
Query:   10 KAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLP-CPSTSSPLPLTIALQLITPSPPS------TLSSACPLSS------------------PLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQ---TGIRRRPRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            K ++ W +LR AI+ S  + + +SS     T      T   P CP +      T+ + + TP+  +       LS+A    +                  P++ L SH+  N GVDNTGN+R WP+E+ LL  ++  G+  Q    G    P    ELG+G  GL  LGL                                      P D +R   V +TDG+  C+++L+ CVA N+ +    A+V   ++        E+   D      + L               + FDL+ A+D LFFE FH  L HT+   L    G    LQPSR GSL+RF  + K+ G
Sbjct:    6 KTKSHWRVLRNAIVRSTSNDTSSSSVDITRTTASSIATDFFPLCPVSFVD---TVKVSMHTPAKDNFAWMMYNLSAAIESETERSITVVVHEKRKDVKFVPISELQSHQMNN-GVDNTGNIRTWPSEQILLSYIISSGILSQIQSVGRPELPVSCCELGSGMAGLASLGLLAC----------------------------------APVDFER---VVITDGNLLCVNNLQLCVAENQRQNTFPARVNNTKIT------AELLRWDRNATLRKDLQ--------------QQFDLVFASDCLFFEEFHEDLAHTIKNLLRRGSGRCLLLQPSRSGSLDRFCVIAKQYG 293          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: XP_008913488.1 (hypothetical protein PPTG_17584 [Phytophthora parasitica INRA-310] >ETN01161.1 hypothetical protein PPTG_17584 [Phytophthora parasitica INRA-310])

HSP 1 Score: 98.6 bits (244), Expect = 4.500e-17
Identity = 98/355 (27.61%), Postives = 145/355 (40.85%), Query Frame = 0
Query:    7 RPSKAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLPCPSTSSPLPLTIALQLITPSPPSTLSSACPLSS------------------------PLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRR-------PRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            +P K +  W +L+ A+L S  + +PA       T       F    P T  P+  T  +Q+ +P+  + +  A  LSS                         +A L+SH+  N GVDNTGN+R WP+E+ LL  +L  G+  Q  ++RR       P    ELG+G  GL   GL                                      P D +R   V +TDG+P  + +L+ C+  NK +    A+ +                 D+T +  R   +    E   HQ     FDL+ A+D LFFE FH  L +T+++ L    G    LQPSR GS+ERF  + +  G
Sbjct:    5 QPEKTRRHWRVLQNALLRSTSNGAPAPVDATGSTASSIATEFFPLYPET--PVD-TAKVQMSSPAQENFMWMAYDLSSTTNKQVDRSSKVFVHEKRKDVKRVSIAELLSHK-VNEGVDNTGNIRTWPSEQILLSYMLSSGVCSQ--VQRRGAGGDVLPVMCCELGSGMAGLASQGLLAC----------------------------------APVDFER---VVVTDGNPLSVKNLQLCIEENKIQQVFAARAQ---------------HTDITAELLRWDRNATLREDLQHQ-----FDLVFASDCLFFEEFHEDLAYTINSLLRRGSGRCLLLQPSRNGSMERFCVIAERHG 296          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: KUF90167.1 (Calmodulin-lysine N-methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 98.2 bits (243), Expect = 5.800e-17
Identity = 98/360 (27.22%), Postives = 147/360 (40.83%), Query Frame = 0
Query:    2 TVLSPRPSKAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLPCPSTSSPLPLTIALQLITPSPPSTLSSACPLSS------------------------PLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRR-------PRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            ++ + +P K +  W +L+ A+L S  + +PA       T       F    P T  P+  T  +Q+ +P+  + +  A  LSS                         +A L+SH+  N GVDNTGN+R WP+E+ LL  +L  G+  Q  ++RR       P    ELG+G  GL   GL                                      P D +R   V +TDG+P  + +L+ C+  NK +    A+ +                 D+T +  R   +    E   HQ     FDL+ A+D LFFE FH  L +T+ + L    G    LQPSR GS+ERF  + +  G
Sbjct:   16 SMATAQPEKTRRHWRVLQNALLRSTSNGAPAPVDATGSTASSIATEFFPLYPET--PVD-TAKVQMSSPAQENFMWMAYDLSSTTNKQVDRSSKVFVHEKRKDVKRVSIAELLSHK-VNEGVDNTGNIRTWPSEQILLSYMLSSGVCSQ--VQRRGAGGDVLPVMCCELGSGMAGLASQGLLAC----------------------------------APVDFER---VVVTDGNPLSVKNLQLCIEENKIQQVFAARAQ---------------HTDITAELLRWDRNATLREDLQHQ-----FDLVFASDCLFFEEFHEDLAYTIKSLLRRGSGRCLLLQPSRNGSMERFCVIAERHG 312          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: ETI34815.1 (hypothetical protein F443_18753 [Phytophthora parasitica P1569] >ETK75100.1 hypothetical protein L915_18237 [Phytophthora parasitica] >ETL28538.1 hypothetical protein L916_18143 [Phytophthora parasitica] >ETL81793.1 hypothetical protein L917_17957 [Phytophthora parasitica] >ETM34997.1 hypothetical protein L914_18043 [Phytophthora parasitica] >ETO63557.1 hypothetical protein F444_18754 [Phytophthora parasitica P1976] >ETP04654.1 hypothetical protein F441_18616 [Phytophthora parasitica CJ01A1] >ETP32802.1 hypothetical protein F442_18569 [Phytophthora parasitica P10297])

HSP 1 Score: 97.8 bits (242), Expect = 7.600e-17
Identity = 98/355 (27.61%), Postives = 144/355 (40.56%), Query Frame = 0
Query:    7 RPSKAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLPCPSTSSPLPLTIALQLITPSPPSTLSSACPLSS------------------------PLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRR-------PRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            +P K +  W +L+ A+L S  + +PA       T       F    P T  P+  T  +Q+ +P+  + +  A  LSS                         +A L+SH+  N GVDNTGN+R WP+E+ LL  +L  G+  Q  ++RR       P    ELG+G  GL   GL                                      P D +R   V +TDG+P  + +L+ C+  NK +    A+ +                 D+T +  R   +    E   HQ     FDL+ A+D LFFE FH  L +T+ + L    G    LQPSR GS+ERF  + +  G
Sbjct:    5 QPEKTRRHWRVLQNALLRSTSNGAPAPVDATGSTASSIATEFFPLYPET--PVD-TAKVQMSSPAQENFMWMAYDLSSTTNKQVDRSSKVFVHEKRKDVKRVSIAELLSHK-VNEGVDNTGNIRTWPSEQILLSYMLSSGVCSQ--VQRRGAGGDVLPVMCCELGSGMAGLASQGLLAC----------------------------------APVDFER---VVVTDGNPLSVKNLQLCIEENKIQQVFAARAQ---------------HTDITAELLRWDRNATLREDLQHQ-----FDLVFASDCLFFEEFHEDLAYTIKSLLRRGSGRCLLLQPSRNGSMERFCVIAERHG 296          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: XP_009516697.1 (hypothetical protein PHYSODRAFT_552743 [Phytophthora sojae] >EGZ29422.1 hypothetical protein PHYSODRAFT_552743 [Phytophthora sojae])

HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16
Identity = 98/343 (28.57%), Postives = 141/343 (41.11%), Query Frame = 0
Query:   10 KAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHLPCPSTSSPLPLTIALQ-----LITPSPPSTLSSACPL----------SSPLAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRR-------PRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            K Q  W +LR+A+L S  +SS A +     +     +     C   ++ + +    Q     +    PP+  +    +             +A L+SH+  N GVDNTGN+R WP+E+ LL  +LK G+  Q  ++RR       P    ELG+G  GL  LGL                                      P D  R   V +TDG+P  + +L+ CV  N+ +    A+ +               D D+T +  R   D    E    Q     FDL+ A+D LFFE FH  L HT+ + L P  G    LQPSR GS+ERF A+    G
Sbjct:    6 KTQRHWRVLREALLRS--TSSGAVNGATASSISTEFFPLFAECAVDATRVRIHSPAQENFVWVAYDLPPAAGAEGSKIYVHEKCKDVKRVSIAELLSHQ-VNRGVDNTGNIRTWPSEQILLSYMLKSGVCSQ--VQRRDASGKPLPVACCELGSGMAGLASLGLLAR----------------------------------PPVDLRR---VVVTDGNPLSVKNLQLCVEENRKQQVFAARSQ---------------DTDITAELLRWDRDAKLREDLQQQ-----FDLVFASDCLFFEEFHEDLAHTVKSLLRPGSGRCLLLQPSRNGSMERFCAIAARHG 286          
BLAST of NO12G03770 vs. NCBI_GenBank
Match: KUF96510.1 (tRNA methyltransferase 10 B [Phytophthora nicotianae])

HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16
Identity = 77/252 (30.56%), Postives = 109/252 (43.25%), Query Frame = 0
Query:   86 LAALVSHRPENVGVDNTGNVRVWPAEEALLLLLLKKGLDRQTGIRRR-------PRRILELGAGCTGLLGLGLAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVCLTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMTQKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTHLHPEGGEAWFLQPSRGGSLERFIALVKEEG 331
            +A L+SH+  N GVDNTGN+R WP+E+ LL  +L  G+  Q  ++RR       P    ELG+G  GL   GL                                      P D +R   V +TDG+P  + +L+ C+  NK +    A+ +                 D+T +  R   +    E   HQ     FDL+ A+D LFFE FH  L +T+ + L    G    LQPSR GS+ERF  + +  G
Sbjct:   44 IAELLSHK-VNEGVDNTGNIRTWPSEQILLSYMLSSGVCSQ--VQRRGAGGDVLPVMCCELGSGMAGLASQGLLAC----------------------------------APVDFER---VVVTDGNPLSVKNLQLCIEENKIQQVFAARAQ---------------HTDITAELLRWDRNATLREDLQHQ-----FDLVFASDCLFFEEFHEDLAYTIKSLLRRGSGRCLLLQPSRNGSMERFCVIAERHG 235          
The following BLAST results are available for this feature:
BLAST of NO12G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25663.13.200e-2342.77Nicotinamide N-methyltransferase, putative [Nannoc... [more]
GAX94347.12.800e-1932.00Hypothetical protein PINS_002244 [Pythium insidios... [more]
XP_008609102.11.100e-1831.89hypothetical protein SDRG_05178 [Saprolegnia dicli... [more]
XP_009836001.12.000e-1730.30hypothetical protein H257_10934 [Aphanomyces astac... [more]
XP_024586678.12.000e-1727.79Uncharacterized conserved protein [Plasmopara hals... [more]
XP_008913488.14.500e-1727.61hypothetical protein PPTG_17584 [Phytophthora para... [more]
KUF90167.15.800e-1727.22Calmodulin-lysine N-methyltransferase [Phytophthor... [more]
ETI34815.17.600e-1727.61hypothetical protein F443_18753 [Phytophthora para... [more]
XP_009516697.11.700e-1628.57hypothetical protein PHYSODRAFT_552743 [Phytophtho... [more]
KUF96510.11.700e-1630.56tRNA methyltransferase 10 B [Phytophthora nicotian... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010360NSK010360Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03770.1NO12G03770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671580gene_5555Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101014g2gene4849Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03770.1NO12G03770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03770 ID=NO12G03770|Name=NO12G03770|organism=Nannochloropsis oceanica|type=gene|length=1612bp
ACAGGCGCAGCCCCGCCCGACTCCATTATGACGGTCCTGTCACCCCGGCC
TAGCAAGGCGCAGGCTCGGTGGAATCTCCTTCGGCAAGCCATCCTATCAT
CAGCAGGCTCCTCCTCCCCTGCCTCCTCCTCTTTGCCGCCGCATACCGGT
GGCATCAGGACGTACACGTTTCATCTTCCATGTCCTTCCACGTCATCGCC
ATTGCCTCTAACCATTGCTCTTCAACTCATCACGCCAAGCCCTCCTTCGA
CCCTCTCCTCGGCCTGCCCCTTGTCCTCCCCATTAGCCGCCCTTGTCTCC
CACCGCCCTGAGAATGTCGGCGTCGACAACACCGGCAATGTGCGAGTGTG
GCCGGCGGAAGAGGCGCTACTCTTACTGCTGCTGAAGAAAGgtatggaac
tgaatggctattgtatggcgcggcttacttgtatacccagggcaaagcaa
cgaacaaggcctcaagaatctcatctcctaccctccccttctcccaagGC
CTGGACAGACAGACTGGCATCAGGAGGCGGCCAAGGCGCATTCTTGAACT
GGGCGCGGGCTGCACGGGTTTGCTCGGTTTGGGGCTAGCCATGGCTTGGG
GTGGTAATAGCTTGAATGGCGGTCCCTCCACCCCTTGTACGGTAATCACA
CAAGCTAACTCTCCACCATCAACGACAACACCCGCTCATTCAGAATTCGT
GCCATCAGACGCCGACCGATCGCTGTATGTGTGCCTTACTGACGGGCATC
CAGACTGTCTCTCTTCCCTCCGTAAATGCGTCGCACTGAACAAAACCCGA
CTCCCATCAGGGGCGAAGGTCGAGGTGCAGAGGTTGGTATGGAAGGAGGA
AGGGGAGCAGGAAATAAAAGATTGCGATATGACGCAGAAATGTCACAGGC
AACTCCATGACAATCATACGGACGAAAAGAGCCATCACCAAGGCTGCTGT
GAGCCCTTTGATCTCATCGTGGCGGCAGATGTCCTCTTCTTCGAGCGCTT
CCATCGCGCCCTCCTTCACACCCTCCACACACACTTGCATCCCGAGGGAG
GCGAGGCTTGGTTCTTGCAGCCGTCGCGGGGGGGGTCTTTGGAAAGATTC
ATTGCACTAGTGAAGGAGGAAGGGGGATGGGAAGTGGTGTGGGAGGGAGA
GAGGGGTGGGATGCAGACGGGAGGTGATGACTGTGATTATGTGGAGAGTG
CCCCGTTGCAGCTGCTCAAATTGCGGTGTACGCGGCAATCTGACGGCGGA
ATCGATCAGAGTATAACTTATGTTGCTAGCTAATGGAGTGTGTAGTTGTC
CCAAGTACCCACATGCAACGTTGCTTCCATCTCGCCTTCCTACGAATGCA
TGTTCATTCACGATATAGCACATTACGTCACCACGTTGTGGCCGGTAGAG
CGCAGGAAACAGATGATGAAGATTAACAATCAATGACAGGGCGCCCTGTA
CGTATGGACATGCCAGAAGCTTCATGGTGAAGAGGCTAGTCTCAAAAAGA
CTTTGCCCATTGCATTTCTCATAAGTAAACCTGCCCTTGAACTTTGCGCC
GTTAACAACAAAATTTAATAGGGAGGTCCGTCATGGTGATTACAACTAAT
GTGGGTTGAGTG
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protein sequence of NO12G03770.1

>NO12G03770.1-protein ID=NO12G03770.1-protein|Name=NO12G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MTVLSPRPSKAQARWNLLRQAILSSAGSSSPASSSLPPHTGGIRTYTFHL
PCPSTSSPLPLTIALQLITPSPPSTLSSACPLSSPLAALVSHRPENVGVD
NTGNVRVWPAEEALLLLLLKKGLDRQTGIRRRPRRILELGAGCTGLLGLG
LAMAWGGNSLNGGPSTPCTVITQANSPPSTTTPAHSEFVPSDADRSLYVC
LTDGHPDCLSSLRKCVALNKTRLPSGAKVEVQRLVWKEEGEQEIKDCDMT
QKCHRQLHDNHTDEKSHHQGCCEPFDLIVAADVLFFERFHRALLHTLHTH
LHPEGGEAWFLQPSRGGSLERFIALVKEEGGWEVVWEGERGGMQTGGDDC
DYVESAPLQLLKLRCTRQSDGGIDQSITYVAS*
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Synonyms
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