NO12G03740, NO12G03740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03740 vs. NCBI_GenBank
Match: EWM25670.1 (er lumen protein retaining receptor [Nannochloropsis gaditana]) HSP 1 Score: 558.9 bits (1439), Expect = 9.300e-156 Identity = 273/295 (92.54%), Postives = 284/295 (96.27%), Query Frame = 0 Query: 1 MGQSKGGNVNMQLDRYLRFMGKHRNSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGGLV 296 MG+SKGGNVNMQLDRYLR + KHR SPA AWVGFLLLSLVVWKLVSDGDFSFIMTYGAFAR+FGFGLLAVK+WTARSATGVS KTLQLY LVFFFRLTSIIPFSGYLPYDKSGDWFYHFVES+SLFLVLV++YLVK+RFPHSYDERTDSFGN+HVP GALVYLA+PC LAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYL+SVRSGLPLQLPRAGGLV Sbjct: 54 MGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCLALAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 348
BLAST of NO12G03740 vs. NCBI_GenBank
Match: XP_005854326.1 (er lumen protein retaining receptor, partial [Nannochloropsis gaditana CCMP526] >EKU22033.1 er lumen protein retaining receptor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 425.2 bits (1092), Expect = 1.600e-115 Identity = 218/295 (73.90%), Postives = 230/295 (77.97%), Query Frame = 0 Query: 1 MGQSKGGNVNMQLDRYLRFMGKHRNSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGGLV 296 MG+SKGGNVNMQLDRYLR + KHR SPA AWVGFLLLSLVVWKLVSDGDFSFIMTYGAFAR+FGFGLLAVK+WTARSATGVS KTLQLY LVFFFRLTSIIPFSGYLPYDKSGDWFYHFVES+SLFLVLV++YLVK+RFPHSYDERTDSFGN+HVP GALVYLA+PCF LAVLFHPGLNSHFLADTTWAFS+ GSKMVGVFVLLTQFIHIILMVDFFYYYL+SVRSGLPLQLPRAGGLV Sbjct: 43 MGESKGGNVNMQLDRYLRLLSKHRQSPALAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARTFGFGLLAVKLWTARSATGVSFKTLQLYALVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESLSLFLVLVSMYLVKVRFPHSYDERTDSFGNLHVPASFGALVYLAVPCFALAVLFHPGLNSHFLADTTWAFSI-------------------------------------------------------GSKMVGVFVLLTQFIHIILMVDFFYYYLISVRSGLPLQLPRAGGLV 282
BLAST of NO12G03740 vs. NCBI_GenBank
Match: GAX19902.1 (hypothetical protein FisN_1Lh630 [Fistulifera solaris]) HSP 1 Score: 300.4 bits (768), Expect = 6.000e-78 Identity = 143/270 (52.96%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 25 NSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGGL 295 N W GF SL V+ L+S GDFSF+MTYGA AR FGFG+L VK + ++ ATGVS+K+LQLY LVFFFRLTSII GYLPYDKSGDW YH +E +SL ALY + F +Y D FG +VP GA VY+A+P ++++ HP LN+ FL+DT W ++MYLES+A++PQLYMFQKQ+S VVE+L H+V A GF R+++ +FW+ SYHEL SGS++ G L +QF+ ++LM+DFF+YY ++V++ PL LP+ G+ Sbjct: 90 NKNVYMWAGFFTASLFVYFLLSGGDFSFLMTYGAMARMFGFGILIVKTYKSQRATGVSVKSLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHLIEIMSLIFTSAALYGCMVPFKGTYQADMDRFGEFNVPPGAGA-VYIAVPVLIISIFIHPNLNADFLSDTAWTYAMYLESMALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLMEFLFWIYSYHELASSSGSRLPGYLALFSQFVQLVLMIDFFWYYYMAVKNATPLVLPQHSGM 358
BLAST of NO12G03740 vs. NCBI_GenBank
Match: GAX28580.1 (hypothetical protein FisN_1Hh630 [Fistulifera solaris]) HSP 1 Score: 300.1 bits (767), Expect = 7.800e-78 Identity = 143/270 (52.96%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 25 NSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGGL 295 N W GF SL V+ L+S GDFSF+MTYGA AR FGFG+L VK + ++ ATGVS+K+LQLY LVFFFRLTSII GYLPYDKSGDW YH +E +SL ALY + F +Y D FG +VP GA VY+A+P ++++ HP LN+ FL+DT W ++MYLES+A++PQLYMFQKQ+S VVE+L H+V A GF R+++ +FW+ SYHEL SGS++ G L +QF+ ++LM+DFF+YY ++V++ PL LP+ G+ Sbjct: 90 NKNVYMWAGFFTASLFVYFLLSGGDFSFLMTYGAMARMFGFGILIVKTYKSQRATGVSVKSLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHLIEIMSLIFTSAALYGCMVPFKGTYQADMDRFGEFNVPPGAGA-VYIALPVLIISIFIHPNLNADFLSDTAWTYAMYLESMALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLMEFLFWIYSYHELASSSGSRLPGYLALFSQFVQLVLMIDFFWYYYMAVKNATPLVLPQHSGM 358
BLAST of NO12G03740 vs. NCBI_GenBank
Match: OEU15622.1 (hypothetical protein FRACYDRAFT_170314, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 298.9 bits (764), Expect = 1.700e-77 Identity = 146/252 (57.94%), Postives = 184/252 (73.02%), Query Frame = 0 Query: 25 NSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYY 277 N+ W GF SL V+ ++S GDFSF+MTYG AR+FGFG+L +K + ++ ATGVS+KTLQLY +VFFFRLTSII GYLPYDKSGDW YHFVE +SL L +ALY + F H+Y D FG + VP GA VYLA P LLA++ HP LN+ F++DT W ++MYLES A+LPQLYMFQKQSS VVE+L H+VFA GF RV++ +FW+ SYHEL D SGSK+ G L + + II+M+DFF+YY Sbjct: 109 NANVLMWAGFFSASLFVYFMMSGGDFSFLMTYGGMARTFGFGILNLKTFKSQRATGVSIKTLQLYVIVFFFRLTSIIRHEGYLPYDKSGDWLYHFVEGMSLVLASLALYACMVPFKHTYQAELDKFGELLVPPGTGA-VYLAAPILLLAIIVHPNLNADFISDTAWTYAMYLESAALLPQLYMFQKQSSGVVELLTAHFVFALGFGRVMEFLFWIYSYHELADASGSKLPGYLALFSLAVQIIMMLDFFWYY 359
BLAST of NO12G03740 vs. NCBI_GenBank
Match: XP_002290839.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92591.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 296.6 bits (758), Expect = 8.600e-77 Identity = 146/268 (54.48%), Postives = 189/268 (70.52%), Query Frame = 0 Query: 25 NSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAG 293 N W GF SL V+ ++S GDFSF+MTYGA +R FGFG+L VK + ++ ATGVS+KTLQLY LVFFFRLTSII GYLPYDKSGDW YH +E ++L AL+ + F +Y D FG M+VP GA VYLA+P LLAV HP LNS F++D W ++MYLESVA++PQL+MFQKQ S VVE+L H+V A GF RV++ +FW+ SYHEL +GSK+ G L +QF+ ++LM+DFF+YY ++V++ PL LP G Sbjct: 7 NKNVIMWAGFFTASLFVYFMMSGGDFSFLMTYGAMSRMFGFGILNVKTFMSKRATGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGA-VYLAVPVMLLAVFVHPNLNSDFVSDVAWTYAMYLESVALVPQLFMFQKQQSGVVELLTAHFVAALGFGRVMEFMFWVYSYHELATSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHG 273
BLAST of NO12G03740 vs. NCBI_GenBank
Match: CBJ26352.1 (er lumen protein retaining receptor 1 [Ectocarpus siliculosus]) HSP 1 Score: 290.8 bits (743), Expect = 4.700e-75 Identity = 146/285 (51.23%), Postives = 198/285 (69.47%), Query Frame = 0 Query: 5 KGGNVNMQLDRYLRFMGKHRNSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLP 290 +GG+ NM + + +H N A W GF S VV+ L SDGDFSF+MT+ +F R FGF +L + + A GVS+K+LQLY +VF RL S++ GYLPYD+SGD+ YH E SL L + + L+ +F +Y + DSFG +HVP + G L Y+ +PC LLA++ HP LN +FL+DT W FSMYLES+A++PQL+MFQKQ+ +VEVL+ H FA G ARVLDM+FWM SY EL H+GS VG+FVL +QF+H+++M DFFYYY +SV++G +QLP Sbjct: 8 RGGSSNMVMGTVRK---QHMN--IALWFGFFTASFVVFYLFSDGDFSFLMTFASFTRGFGFAVLLGLMLAKKHARGVSMKSLQLYAVVFASRLVSVLQHEGYLPYDRSGDFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTL-YIFVPCLLLAIVMHPNLNKNFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGLARVLDMVFWMFSYKELT-HAGSNSVGMFVLFSQFVHVVIMGDFFYYYAISVKTGNMMQLP 285
BLAST of NO12G03740 vs. NCBI_GenBank
Match: XP_002178083.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50897.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 290.8 bits (743), Expect = 4.700e-75 Identity = 138/252 (54.76%), Postives = 183/252 (72.62%), Query Frame = 0 Query: 25 NSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYY 277 N W GF +SLVV+ ++S GDFSF+MTYGA +R FGFG+L VK + + A+GVS+KTLQLY LVFFFRLTSII GYLPYDKSGDW YHF+E +L ALY + F +Y + D FG +VP+ +GA +YLA P ++A+L HP LN+ F++DT W ++MYLES A++PQLYMFQKQ+S VVE+L H+V A GF R+++ FW+ SYHEL + SGSK+ G L +QF+ ++LM+DFF+YY Sbjct: 1 NKNVYIWAGFFTISLVVYSMLSGGDFSFLMTYGAMSRMFGFGILNVKTFKSERASGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHFIEIAALLFTASALYGCMVPFKGTYQKELDRFGEFNVPEGLGA-IYLAGPILIIAILIHPNLNADFISDTAWTYAMYLESTALMPQLYMFQKQASGVVELLTAHFVAALGFGRLMEFFFWIYSYHELANSSGSKLPGYLALFSQFVQLVLMIDFFWYY 251
BLAST of NO12G03740 vs. NCBI_GenBank
Match: XP_009041692.1 (hypothetical protein AURANDRAFT_59616 [Aureococcus anophagefferens] >EGB03617.1 hypothetical protein AURANDRAFT_59616 [Aureococcus anophagefferens]) HSP 1 Score: 290.4 bits (742), Expect = 6.200e-75 Identity = 146/280 (52.14%), Postives = 198/280 (70.71%), Query Frame = 0 Query: 19 FMGKHRNSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNM-HVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQS--SQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGGLV 296 F G ++S A W+GFL+LS +V+ + SDGDFSF++TY + R FG LL K+ T++SA G+S KTL Y +VF RL SI+ GYLPYD+SGDW YH VE S L AL LV + SY+E DSFG + +P +GALV + +P L A FHPGLN F++DT+W ++MYLES A+LPQL++FQKQS + V+ LIGH+V A GF+R+++M FWM+S+HEL D +G++ VGV VL TQ +H+++M DFFY+YL SV G+P+QLP A G+V Sbjct: 14 FEGTRKSSMLAPWLGFLMLSTLVYLVFSDGDFSFLLTYASLTRCFGITLLVAKMQTSQSAAGLSAKTLHCYAVVFASRLVSIMRHEGYLPYDRSGDWIYHCVEFASFGATLAALGLVHVVHGRSYEENNDSFGALPPLPGSLGALVVI-LPTLLFAACFHPGLNKDFISDTSWTYAMYLESFAILPQLFLFQKQSKANATVDYLIGHFVAALGFSRLVEMGFWMNSFHELADRNGNRYVGVLVLATQMVHLVIMGDFFYFYLRSVGRGMPIQLPTAAGMV 292
BLAST of NO12G03740 vs. NCBI_GenBank
Match: OQS05607.1 (hypothetical protein THRCLA_02290 [Thraustotheca clavata]) HSP 1 Score: 286.6 bits (732), Expect = 8.900e-74 Identity = 138/275 (50.18%), Postives = 185/275 (67.27%), Query Frame = 0 Query: 19 FMGKHRNSPAAAWVGFLLLSLVVWKLVSDGDFSFIMTYGAFARSFGFGLLAVKIWTARSATGVSLKTLQLYGLVFFFRLTSIIPFSGYLPYDKSGDWFYHFVESVSLFLVLVALYLVKIRFPHSYDERTDSFGNMHVPDQVGALVYLAIPCFLLAVLFHPGLNSHFLADTTWAFSMYLESVAMLPQLYMFQKQSSQVVEVLIGHWVFASGFARVLDMIFWMSSYHELVDHSGSKMVGVFVLLTQFIHIILMVDFFYYYLVSVRSGLPLQLPRAGG 294 F+ KH+ + A W GF ++ L + L SDGDFSF+MT+GAF R+FGFG+L K T RS +G+SLKTLQLY VFFFRL SI+ + GYLPYD+SGDW Y F+E V L L + ++LV ++F SY+ R D+FG +HVP + G +VY+ +PC L +L HP LN ++ AD W ++Y+E+VA+LPQL+MFQK+ VE I HWV+A F L + FWM SYHEL + VG V+ Q H+I+M DF YYY S++ G P+ LP GG Sbjct: 11 FVTKHKGN-IALWTGFFVIVLFAYHLFSDGDFSFLMTFGAFVRAFGFGILIFKSLTQRSVSGLSLKTLQLYAFVFFFRLCSILRYQGYLPYDRSGDWLYTFIEFVGLALTIGVIFLVTVQFRGSYEFRYDTFGFLHVPSEYG-IVYILVPCIFLGMLIHPNLNMNWFADVAWTIALYIEAVAILPQLFMFQKRGGGTVESCISHWVYALAFGSFLHLWFWMFSYHELGEKDAGHHVGYTVIFVQIGHMIMMGDFLYYYFKSLKDGGPMMLPTHGG 283 The following BLAST results are available for this feature:
BLAST of NO12G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03740 ID=NO12G03740|Name=NO12G03740|organism=Nannochloropsis oceanica|type=gene|length=2304bpback to top protein sequence of NO12G03740.1 >NO12G03740.1-protein ID=NO12G03740.1-protein|Name=NO12G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bpback to top Synonyms
Publications
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