NO12G03600, NO12G03600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03600 vs. NCBI_GenBank
Match: XP_005853754.1 (hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526] >EKU22606.1 hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 163.3 bits (412), Expect = 4.900e-36 Identity = 90/233 (38.63%), Postives = 128/233 (54.94%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGT-CFYVNL----------GESFNRPS----NPYRLANEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQG-TGEYRAPIPILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEVIATNDRLYIXXXXXXXXXXXXXXXXTWIYTTWFAGEAGA 451 C+ D EL + + + + C + L G+ + PS P+ +EI++ + +++QGN + +PF+DC ++RCFRV+ GGYLE+R+V INQ G R P+ EG TG V E RG +V FE GA GG F+GV F+DD S +E + I+ + AL S RIYGGFV GR+QF CLFYD+E + DR+Y+ W Y T+ E GA Sbjct: 173 CFVGDMEELAEALADDSECTVITLVSTSSRDGVSGDGNSIPSAAAQTPFVFRDEILVSKRVIIQGNSVLLPFLDCSQSIRCFRVMDGGYLELRYVRINQSDKGVLRPVNPLYEGFTVTGMVREYRGSSVYFEPGATGGRFLGVYFDDDQS--DETDWIVEQSFALTSFRIYGGFVFMAGGRLQFELCLFYDFEFVTPLDRIYLGGDVLVLAGEVSFTGCVWAYITFLGFENGA 403
BLAST of NO12G03600 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 126.3 bits (316), Expect = 6.600e-25 Identity = 75/190 (39.47%), Postives = 99/190 (52.11%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTGEYRAPIP--ILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEVIAT-NDRLYI 421 C +D EL I N +C V L +P Y L EI++ R +++ GNP +P ID D +R F V+ GG+L++R V G R P P I P V E RGG+V + GALGG F GV+F DD ++ I + RIYGG V V GR+ FVGCLF+D +I T + LYI Sbjct: 155 CEVNDGLELTDAIENQSCSIVYL-----KPGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYI 339
BLAST of NO12G03600 vs. NCBI_GenBank
Match: XP_005852539.1 (hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526] >EKU23293.1 hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 125.6 bits (314), Expect = 1.100e-24 Identity = 108/301 (35.88%), Postives = 145/301 (48.17%), Query Frame = 0 Query: 193 ADLLNTTSGNAAAAASNTFAFASSLSDKFTDHWRDSTEGEWCWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTG------------------------------EYRAPIPILE-------------GIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEVIA-TNDRLYIXXXXXXXXXXXXXXXXTWIYTTWFAGEAG 450 AD + T+ GN + + A A S + C ++A ELE I TC V L S + Y L EI+I R +V+ GN + +PFIDC D VR FRV+ GG+L+++ V IN G G ++R P E GEV++ RGG+V FE GALGG F G+ F D + E+I + I L+ +RI+GG V+ G + F C+FYD E++ +DR+Y XXXXXXXXXXXXXXXX W Y T E G Sbjct: 122 ADEVTTSFGNKLLGGAASLALAVG-----------SGNQDACRVANAGELEDAIERKTCAVVILTSS---EPDAYVLEREIVISRAVVVMGNSVMLPFIDCKDIVRAFRVVPGGFLDLQFVRINIGKGFVRPRWGLFRKQKTRRNLRGEEIILDEEEDDWREPRTKEEREMVRNLQLGGQAADAEPGEVIDIRGGSVYFEPGALGGTFNGIYFTSDQTDVEDIMVAIEQTTNLIGIRIWGGHVLVADGDVSFNACVFYDLELLTPLSDRIYXXXXXXXXXXXXXXXXXHWFYFTVIGAENG 408
BLAST of NO12G03600 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 114.8 bits (286), Expect = 2.000e-21 Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLA------NEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTGEYRAPIPILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEVI 413 CWP + EL+ + C V L +NP +A NEI++ RH+ + G+P +P ID +R F ++ GG+LE+++V + QG G YR + + +V E +GG+V+ E GA G NFVGV+F M+ QE E I + RIYGG V AG ++F C F+D ++ Sbjct: 204 CWPRNIVELQIAVEEADCPLVVL-------TNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMIL 381
BLAST of NO12G03600 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.2 bits (282), Expect = 5.800e-21 Identity = 69/175 (39.43%), Postives = 89/175 (50.86%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTGEYRAPIPILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYD 409 CWP+D AEL + N C V L + Y L +I ++R++ + GNP +P ID D R F V GG LE++ V + QG G R LEG + V E RGG V E GALG NFVGV F + + ++ I V RIYGG V AG + F GC F+D Sbjct: 115 CWPADGAELLDAVENQGCELVVLSSG---DPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYG-LEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWD 285
BLAST of NO12G03600 vs. NCBI_GenBank
Match: EWM24109.1 (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana]) HSP 1 Score: 113.2 bits (282), Expect = 5.800e-21 Identity = 69/175 (39.43%), Postives = 89/175 (50.86%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTGEYRAPIPILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYD 409 CWP+D AEL + N C V L + Y L +I ++R++ + GNP +P ID D R F V GG LE++ V + QG G R LEG + V E RGG V E GALG NFVGV F + + ++ I V RIYGG V AG + F GC F+D Sbjct: 134 CWPADGAELLDAVENQGCELVVLSSG---DPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYG-LEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWD 304
BLAST of NO12G03600 vs. NCBI_GenBank
Match: XP_005854242.1 (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >EKU22122.1 hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 100.9 bits (250), Expect = 3.000e-17 Identity = 60/141 (42.55%), Postives = 76/141 (53.90%), Query Frame = 0 Query: 283 GNPLEIPFIDCFDTVRCFRVIAGGYLEMRHVHINQGTGEYRAPIP--ILEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEVIAT-NDRLYI 421 GNP +P ID D +R F V+ GG+L++R V G R P P I P V E RGG+V + GALGG F GV+F DD ++ I + RIYGG V V GR+ FVGCLF+D +I T + LYI Sbjct: 84 GNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYI 224
BLAST of NO12G03600 vs. NCBI_GenBank
Match: EWM22206.1 (hypothetical protein Naga_100291g4 [Nannochloropsis gaditana]) HSP 1 Score: 99.4 bits (246), Expect = 8.600e-17 Identity = 131/586 (22.35%), Postives = 208/586 (35.49%), Query Frame = 0 Query: 689 DFWIMGVCEPEPDVWAAGKPFFVTAGYEGGSRCRQDSERERMRMMEGGKEVKVVK-----EEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLLSINTTAFKVDYDNDTQLETL-KAMGVPPLLIQAAIKIQNALDPLRGGEREGGQGSAATAPQDDDTIFYVNSRTEGYCGVCGSGSDSVGGPGADHCEVEENCGDLNRAPGEYAGMLGWGEEGFEEVEFLPHFILLGEMEMTTREGVSSAPLDHSRRAEEEGKGEGGTEGGIHLKKEGVEAAVRQALLTLIPSIDSGPESLSIGVWESEPDPLFAAMFPSLPPSFFVGQEGFEVTH-RHKLAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGL--SHKEAQEWHADGLSALIKEGIVREEGVEVGHVGVEFEKVWKAPAYNDMKGMGGQD----GGKATSFGSLSVVVTDPLLPAVPVTEVMF--KHPYVIHLEKFPSSVLVKIELFGIPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRTNEDGGFDFPYRFLRLMDAAPGEYYVQATVLETGVYGQSLPFSLAAEGRSRKLYGPRL 1260 DFWI G CEPE WA GK FF+ GG C + E L L++ N + ++++ N QL L K + P +L+ A + D L A A + T Y+N +GYC +C DSV GPG + G A G ++E H++++ ++++T+R G +GG+ +E V++A+ +L+ G E+L + V ++ PD L A F Q+G H R +LA E L S EA +GL A + +VG + + ++++ PAYN +G+ D GG++TS G+ SV + D PA+PVT + + YV L FP V + L + V ++ G +F L+ G+Y+++AT ++G+Y S FS+ R RK+YGP + Sbjct: 371 DFWIAGSCEPEHGAWAPGKAFFI----PGGMGCEEHXXXXXXXXXXXXXXXXXXXXXXXVERRFATRRRLQALATALLGSNQALAPGLTDQFAAGDLSLVAFNISKKELEFGNPAQLRPLAKIVQDPQMLLAAGMGFSEMKDAL---------VKVAPASPSNRTTMYINGARDGYCSLC--NVDSVSGPG-----LSSXXXXXXXXXGSVAAQGGPVLNDYKE-----HYVIMADLDVTSR----------------------GDQGGL------IEPEVQEAVASLLALEGDGLETLQVTVSDTTPDSLLKATF----------QDGLPDGHERRRLAFHRAMATELYDMTQRFKVMIVATSKDRSESVLERLQPSGNEAPSLQ-NGLIAFFSD----PASTDVGSLQLLYDRMIYVPAYN-TRGLLDNDMNLPGGQSTSLGTFSVALQDAEQPAIPVTSAHYGADNNYVASLAHFPPGASVGLRLVKV--------------------GSGLGMTEASWPLGTVNVDKQGVGKLAVQFQPLVH-REGDYFLKATETKSGIYNFSPVFSVDKGARRRKMYGPEM 866
BLAST of NO12G03600 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 97.1 bits (240), Expect = 4.300e-16 Identity = 64/236 (27.12%), Postives = 105/236 (44.49%), Query Frame = 0 Query: 234 CWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFD---TVRCFRVIAGGYLEMRHVHINQGTGEYR-APIPI--------------LEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEV-IATNDRLYIXXXXXXXXXXXXXXXXTWIYTTWFAGEAGA 451 C+P A EL + + C + L N Y + I++DR I + G+P+ +P ID R FRV+ GG+L+++++ + G GE + P+ + + TG++LE+RGG+V E GA G NF GV+F + E ++ I + R YGG + G ++F C F+ + + D+ + T+ TT F AGA Sbjct: 4 CYPQTADELVEAVQELDCSLLFL---TNSDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 236
BLAST of NO12G03600 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 96.7 bits (239), Expect = 5.600e-16 Identity = 72/276 (26.09%), Postives = 120/276 (43.48%), Query Frame = 0 Query: 199 TSGNAAAAASNTFAFASSLSDKFTDHW-----RDSTEGEWCWPSDAAELEQEIVNGTCFYVNLGESFNRPSNPYRLANEIIIDRHIVLQGNPLEIPFIDCFD---TVRCFRVIAGGYLEMRHVHINQGTGEYR-APIPI--------------LEGIPPTGEVLESRGGTVLFEYGALGGNFVGVMFEDDMSGQEEIELIILLNEALVSVRIYGGFVMAVAGRIQFVGCLFYDYEV-IATNDRLYIXXXXXXXXXXXXXXXXTWIYTTWFAGEAGA 451 T+ A A N A ++ K +D + S + + C+P A EL + + C + L N Y + I++DR I + G+P+ +P ID R FRV+ GG+L+++++ + G GE + P+ + + TG++LE+RGG+V E GA G NF GV+F + E ++ I + R YGG + G ++F C F+ + + D+ + T+ TT F AGA Sbjct: 99 TASAVAPPAPNLLTTAHAVLSKGSDRFSSKQQASSDQMDACYPQTADELVEAVQELDCSLLFL---TNFDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 371 The following BLAST results are available for this feature:
BLAST of NO12G03600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03600 ID=NO12G03600|Name=NO12G03600|organism=Nannochloropsis oceanica|type=gene|length=5193bpback to top protein sequence of NO12G03600.1 >NO12G03600.1-protein ID=NO12G03600.1-protein|Name=NO12G03600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1262bpback to top Synonyms
Publications
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