NO12G03560, NO12G03560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_004363644.1 (choline dehydrogenase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 389.0 bits (998), Expect = 3.400e-104 Identity = 234/629 (37.20%), Postives = 358/629 (56.92%), Query Frame = 0 Query: 193 VLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALR----LIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQF-RSAHSNVAGR------YIEAPPPLPRHHSLFNDLSDV----SLTQRTSDSIR---------ALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLD------YIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNVE-----FVIDYISLNNPSTIWQNLGCAFAIYVGLTLCAYLALRHLHKERR 787 VLH + G++ G M A++G SG+GK+ +LD+L+ RK G + G L++G F ++++YV QED+F PT TV+E V++ A L RMP + A R L+ + GL + VGGPLPGG+ VRGLSGG+KRRLS+ CG + P++LFLDE TSGLD +AL+VM ++++ +G+ +I TIHQPR +IW +F+KVM+L++G MY G+AS A WF+ LGYP + DF++DL +ISF KDP + G+KTM+ + +E AA F +S H + R Y + F D SL +R +S R ++ W +F V+L R TNY RNPGNV+AR ++ F + +F + S L G++++ + LLPF SLSLFIYDRQFYS E+A++LY S Y+++N ++E N+ + + + + Y+ +D + + AN F ++L + L +G+ VQL L+ PNQD+AF L AG+V + GF+V ++F +WLQ+TSF+K+ + + +N G + +I+ +NP+T+ N + + A+L L++LHKERR Sbjct: 847 VLHNLTGYIAPGTMTALLGSSGAGKSTMLDVLSMRKNTGNVEGRVLINGH-ERNSSFYKMSSYVPQEDLFLPTVTVREVVMYYATL----RMPAYATPAARWRRCEMLLLESGLLEYVDSKVGGPLPGGITVRGLSGGQKRRLSMVCGLIANPAILFLDEVTSGLDALSALMVMEMIRRLATQGLTIIATIHQPRTSIWRMFDKVMLLANGRLMYMGDASRATEWFN-SLGYPTDPQANPADFLLDLTSISFHKDPALFGNKTMRKLEHVEDAADAFAKSEHMALLRRQQKFVSYSRGVDQTLELMTRFGKDKDAKMQSSLWRRVIESSRKMAGNAEHQSMAPWGTQFGVLLKRAITNYVRNPGNVIARFVLVAFTGFMTGAAFFGLSEHWDALNSRL------GALYFLCVIYVLLPFTSLSLFIYDRQFYSRESAARLYTPSAYYLANSLVELTFNAANVAISASVAYWMIDLGLSDNILGAERNAN---GFWVFLRIMTLLHIVGNQMVQLCGLMMPNQDMAFALGAGFVILCQIFSGFLVIPSNFNEVTEWLQYTSFLKYAYAGVVLNEFEGYDANSDPSFSIIEEAHFSNPTTVADNQYVLLGFFFVFHIMAFLCLKYLHKERR 1460
BLAST of NO12G03560 vs. NCBI_GenBank
Match: KJE93071.1 (hypothetical protein CAOG_009727 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 389.0 bits (998), Expect = 3.400e-104 Identity = 234/629 (37.20%), Postives = 358/629 (56.92%), Query Frame = 0 Query: 193 VLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALR----LIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQF-RSAHSNVAGR------YIEAPPPLPRHHSLFNDLSDV----SLTQRTSDSIR---------ALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLD------YIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNVE-----FVIDYISLNNPSTIWQNLGCAFAIYVGLTLCAYLALRHLHKERR 787 VLH + G++ G M A++G SG+GK+ +LD+L+ RK G + G L++G F ++++YV QED+F PT TV+E V++ A L RMP + A R L+ + GL + VGGPLPGG+ VRGLSGG+KRRLS+ CG + P++LFLDE TSGLD +AL+VM ++++ +G+ +I TIHQPR +IW +F+KVM+L++G MY G+AS A WF+ LGYP + DF++DL +ISF KDP + G+KTM+ + +E AA F +S H + R Y + F D SL +R +S R ++ W +F V+L R TNY RNPGNV+AR ++ F + +F + S L G++++ + LLPF SLSLFIYDRQFYS E+A++LY S Y+++N ++E N+ + + + + Y+ +D + + AN F ++L + L +G+ VQL L+ PNQD+AF L AG+V + GF+V ++F +WLQ+TSF+K+ + + +N G + +I+ +NP+T+ N + + A+L L++LHKERR Sbjct: 331 VLHNLTGYIAPGTMTALLGSSGAGKSTMLDVLSMRKNTGNVEGRVLINGH-ERNSSFYKMSSYVPQEDLFLPTVTVREVVMYYATL----RMPAYATPAARWRRCEMLLLESGLLEYVDSKVGGPLPGGITVRGLSGGQKRRLSMVCGLIANPAILFLDEVTSGLDALSALMVMEMIRRLATQGLTIIATIHQPRTSIWRMFDKVMLLANGRLMYMGDASRATEWFN-SLGYPTDPQANPADFLLDLTSISFHKDPALFGNKTMRKLEHVEDAADAFAKSEHMALLRRQQKFVSYSRGVDQTLELMTRFGKDKDAKMQSSLWRRVIESSRKMAGNAEHQSMAPWGTQFGVLLKRAITNYVRNPGNVIARFVLVAFTGFMTGAAFFGLSEHWDALNSRL------GALYFLCVIYVLLPFTSLSLFIYDRQFYSRESAARLYTPSAYYLANSLVELTFNAANVAISASVAYWMIDLGLSDNILGAERNAN---GFWVFLRIMTLLHIVGNQMVQLCGLMMPNQDMAFALGAGFVILCQIFSGFLVIPSNFNEVTEWLQYTSFLKYAYAGVVLNEFEGYDANSDPSFSIIEEAHFSNPTTVADNQYVLLGFFFVFHIMAFLCLKYLHKERR 944
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_012754335.1 (hypothetical protein SAMD00019534_062830 [Acytostelium subglobosum LB1] >GAM23108.1 hypothetical protein SAMD00019534_062830 [Acytostelium subglobosum LB1]) HSP 1 Score: 309.3 bits (791), Expect = 3.400e-80 Identity = 206/611 (33.72%), Postives = 327/611 (53.52%), Query Frame = 0 Query: 191 VEVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMD-LVNI-SFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSDSIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNVEFVIDYISLNNPS-------------TIWQNLGCAFAIYVGLTLCAYLALRHLHKERR 787 + +LHGV G +E G+++ ++GPSGSGK+ LLDILA+RK+ G I+G L++G+ G ++ AYVTQEDI PT+TV+E + F A+LRL +++ + ++++++GL + + +GG LPGG+ +RGLSGGEKRR+S+ CG VT PSL+FLDEPTSGLD AL+VMR L + RG+ V+C+IHQPR IW LF KVMV+ G+ +Y G G + +LGYP + + DF +D V I + PDI + + E+E + +AH PPP + ++R SW++++R++LGR ++ RNPGN AR + + I L + +G + L + I+G +F+ I+++ L+P+ S++LF+ + ++ E ASKLY YF++ + +E + ++ I Y T P + +V++L + CV + + D +F L +G+ IL GF V + W+ W + + +TF L +N +G +E I+++ P+ T + LG A L + +YLAL LHKERR Sbjct: 73 ITILHGVSGVIERGELVGLMGPSGSGKSTLLDILAERKSSGTITGSLLVNGKEIG-AAYKNYCAYVTQEDILLPTATVEETLRFHADLRLPHMNDEYKRRKIQ-QVLDEIGLSHRAKSKIGGLLPGGIMLRGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVNALIVMRTLMRLTDRGVTVVCSIHQPRQEIWKLFTKVMVVVKGHMIYSG---GDIVGYLNELGYPMPPHVNPADFCLDTAVEIGESTRYPDI--CNRWKQMWEVESNS----NAH----------PPP-------------------DNLTVRPTPSWLYQYRILLGRVARDFVRNPGNCAARTVMGIIIGLLGGSCFGGLGYTQ------LDIPKILGLLFFLIVSLNLMPYTSIALFLSGKALFNQERASKLYHPFPYFLALLTMENVVVIMVSVILPGICYSIAGLSWETMPFALLTLYVVHL--------LSDFCVIAATNITGTSDHSFTLGSGFSVIFILFSGFFVPASQLPKATGWIHWVNPLYYTFTALIINEFQGKKLE-CIEFLPCPFPNGDDLIAAYGLENYTREEMLGIAAGYTFLLFVISYLALAFLHKERR 628
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_020437283.1 (ABC transporter G family protein [Heterostelium album PN500] >EFA85174.1 ABC transporter G family protein [Heterostelium album PN500]) HSP 1 Score: 288.9 bits (738), Expect = 4.800e-74 Identity = 203/612 (33.17%), Postives = 314/612 (51.31%), Query Frame = 0 Query: 193 VLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSDSIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRG--------------TNVEFVIDYISLNNPSTIWQNLGCAFAIYVGLT----LCAYLALRHLHKERR 787 +LHGV G +E G+++A++GPSGSGK+ LLDILA RK+ G I+G L++G+ G ++ +YVTQEDI PT+TV+E + F A+LRL ++++ + ++ED+GL K + +GG LPGG+++RGLSGGEKRR+S+ CG VT PSL+FLDEPTSGLD ALVVM+ L C +G+ VIC+IHQPR IW LF KVMV+ G +Y G S ++F + LG+P + + DF +D +E+ +++ RYIE +H +++ +L R + SW ++++++L R F ++ RNPGN +AR + + L + +G + + + IIG IF+ I + L P+A +SLF+ R ++ E A+K+Y YF+S + +E + +L + I Y + ++ ++ V Y L +C+ L L D F + AG L GF V + +L + + + + F L +N N VI L+N W AF + V T + +YLAL LHKE+R Sbjct: 74 ILHGVSGVIERGELVALMGPSGSGKSTLLDILAKRKSSGHITGQLLVNGKEIG-EAYKNYCSYVTQEDILLPTATVEETLRFYADLRLSDASDEYKQERIR-AVLEDIGLAKKASSKIGGMLPGGIQLRGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVNALVVMKTLMNLCTKGVTVICSIHQPRPEIWRLFNKVMVVVKGRMIYSG--SDILSYF-DSLGFPTPPHVNPADFCLD-------------------AAVEIGESS------------RYIEICERWQQHWE--TEVNTAALPPVEDQQPRRIPSWAYQYQILLKRAFRDFLRNPGNFVARTITGVIVGLLFGACFGGLGETQ------VDIQKIIGVIFFLISGLNLTPYAVISLFLSGRALFNQERAAKIYHPIPYFLSMLTVENIVVVIIAILMAGIT-YAISHLRWSVGRFFFSMLVFYFVHL-----FSDLCIILLTNLTGTSDHTFAIGAGLSVVYQLFAGFFVPVQQLPKSFAFLHYLNPLFYAFASLMVNEFEDRPLVCPPEPQPCQYPNGNDVIKAFGLDN----WTRAD-AFGVTVMWTVVFFILSYLALTFLHKEKR 630
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_644137.1 (ABC transporter G family protein [Dictyostelium discoideum AX4] >Q8T685.1 RecName: Full=ABC transporter G family member 12; AltName: Full=ABC transporter ABCG.12 >AAL91494.1 ABC transporter AbcG12 [Dictyostelium discoideum] >EAL69950.1 ABC transporter G family protein [Dictyostelium discoideum AX4]) HSP 1 Score: 284.6 bits (727), Expect = 9.000e-73 Identity = 208/621 (33.49%), Postives = 319/621 (51.37%), Query Frame = 0 Query: 193 VLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMD-LVNISFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSDSIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYY--NLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNVEFVIDYISLNNPSTI--------------------WQNLGCAFAIYVGLTL----CAYLALRHLHKERR 787 +L+ V G +E G+++A++GPSGSGK+ LLDILA RK+ GKI+G L++G+ G +++ +YVTQED+ TSTV E + F A+L+L + EK ++IED+GL + H+ +GG LPGG+ ++GLSGGEKRR+S+ CG VT PSL+FLDEPTSGLD AAL +M+ L +G+ VIC+IHQPR I+ LF KVMV+ G +Y G S +F E LGYP +NT+ DF +D V I G + + Q++ N IE PP V++ + + SW +++ ++LGR + ++ RN GN +AR+ + L + + + EA V I+G+IF+ I + L PFA +SLF+ R ++ E ASK+Y Y+++ + +ET + L+ + I Y +L + A + + F ++L + + A L D+ F +G +L GF V N + WL W + + ++F L +N +E I + N STI W G +F + V T+ +YLAL L+KE+R Sbjct: 73 ILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNGKEIG-EAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEI-EKIKRVEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFALFNKVMVIIKGKMIYSG--SNILEYF-ESLGYPCPNNTNPADFCLDSAVEIG-------EGER-------YTEICNQWQKIWENELLNEIEYPP--------------VNVEKPKT------ASWGYQYWILLGRTWKDFLRNQGNFVARVGTAVVTGLLFGVCFAGLKETEA------DVQKILGTIFFLITGLNLTPFAVISLFLSGRTLFNAERASKIYHSFPYYMAMVTVETLIVFLVALINAAICYLFAHLRWTAGHFFFAIMVYFFVHL--------LSDFMISTIANLTGTSDMTFAYGSGLSVIYMLFAGFYVPTNELPKSFGWLHWVNPLFYSFVSLVVNQFEDLPLECTRPNIPVGN-STIQIPCQFSNGNQVIEYYGIDDWTR-GSSFGVVVAWTVFFFWTSYLALHFLNKEKR 638
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_003283114.1 (ABC transporter G family protein [Dictyostelium purpureum] >EGC40363.1 ABC transporter G family protein [Dictyostelium purpureum]) HSP 1 Score: 283.9 bits (725), Expect = 1.500e-72 Identity = 215/663 (32.43%), Postives = 328/663 (49.47%), Query Frame = 0 Query: 139 SDSSSASYDCESHSMDGSXDSVDSSAPQSYTWRNIRCSYEANNQSRGGKPVVVEVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQ-RGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMDLV-NISFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTS---DSIRALDSWVW-KFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNV---------EFVIDYISLNNPSTIWQNLGCAFAIYVGLTLCAYLALRHLHKERR 787 +DS S + +S S + S Q R++ S++ + S K +++L GV G + G+++AV GPSGSGKT LLDILA+RK G+I+G L++GQ ++R+ +YV QEDI PT TV+E + F A+L+L EK +++E +GLK + + +GG LPGG+ +RGLSGGEKRR+++ CG +T+PS++ LDEPTSGLD +A VM L++ Q + + VICTIHQPR+ I+ +F K MVL+ G +Y+G FS LGYP T+ D+I+D V I D G K +T L+ + A + L+D +L TS I A ++ +W +F V+ R ++ RNP N L R +V +F+ L + +G E G S V +FY ++ + L PFASLSLFI R ++ E AS+LY Y+ + + E + + I Y+ F+ N N+ + L L G + + + D +F + AG L GF V + + +WL W +F+ ++F+ L N G + V+D LN I + +FAI Y L + H+E+R Sbjct: 2 ADSLSIEMNDQSSSTTLGGGKLVKSKSQMSLRRSLTISFKDLSYSVMVKKKKMQILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESGEITGSVLINGQEID-DDYKRLCSYVVQEDILLPTITVRETLRFYADLKLPPSWTNKEKVERIDQILEQIGLKHRADSKIGGILPGGIILRGLSGGEKRRVTIGCGLITSPSIILLDEPTSGLDSSSAKTVMDTLQELSQTKNVTVICTIHQPRSEIFKMFTKCMVLTEGRLVYYGNKPVEH--FS-SLGYPFPDLTNPADYILDSVTQIKEEGRADEIGDKLSETYLQQASSEASVQ--------------------------LTDSTLLYHTSTKKKKISAYNNGLWTQFIVLWKRTGLDFMRNPSNCLIRFAVAIFVGLLFGACFANLGLDEKGVQSRAAV------LFYLVINMILQPFASLSLFISKRTLFNAERASRLYHTFPYYCAMMFFEILACIGTAFILGTISYW------FSDLNNGVDNYFFAMCILTLAHFAGDFFMLFISCITVQVDTSFAVGAGVATIYQLFAGFFVHIDKLPISFRWLHWCNFVYYSFEALMANEFIGETIIINGKEESGRIVLDQFGLNQRKGINLIIVSSFAIL--FFFMVYFVLHYFHREKR 620
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_646231.1 (ABC transporter G family protein [Dictyostelium discoideum AX4] >Q55DA0.1 RecName: Full=ABC transporter G family member 22; AltName: Full=ABC transporter ABCG.22 >EAL72763.1 ABC transporter G family protein [Dictyostelium discoideum AX4]) HSP 1 Score: 277.3 bits (708), Expect = 1.400e-70 Identity = 197/608 (32.40%), Postives = 316/608 (51.97%), Query Frame = 0 Query: 191 VEVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYC-QRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSDSIRALDSWVW-KFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNVEF----------VIDYISLNNPSTIWQNLGCAFAIYVGLTLCAYLALRHLHKERR 787 +++L GV G + G+++AV GPSGSGKT LLDILA+RK G+ISG L++G ++R+ +YV QED+ PT TV+E + F A+L+L + EK +++E +GL + +GG LPGG+ +RGLSGGEKRR+S+ CG VT+PS++ LDEPTSGLD +A+ VM+ L + Q+ + VICTIHQPR+ I+ LF K+MVL+ G +Y+G F+E +G+P T+ D+I+D V T++ ++ A + +S++ + A + E+ L + + L ++ + + I A ++ ++ +F V+ R ++ RNP N L R +V +F+ L + +G E G S V +FY ++ + L PFAS+SLFI R ++ E ASKLY Y+++ + E + + I Y+ D P F + + L L G + + + + D +F + AG L GF V N+ + +WL W +F+ ++F+ L N G V V+ + LNN NL + +L L + H+E+R Sbjct: 47 MQILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESGEISGAVLINGNEID-DDYKRLCSYVVQEDVLLPTITVRETLRFYADLKLPKSWTEKEKHERIEQILEQIGLSHRADAKIGGVLPGGIVLRGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQKSVTVICTIHQPRSEIFKLFTKIMVLAEGRLVYYGNRPVEH--FTE-IGFPFPDQTNPADYILDAVT-------------TIKEEGRADEIADRLQSSYLDQANQ--ESSSTLTQ-----SQLGIINASGKR--KINAYNNGLFTQFLVLWKRTGLDFIRNPSNCLVRFAVAVFVGLLFGACFSGLGMDEKGVQSRSAV------LFYLVINMILQPFASISLFISKRTLFNAERASKLYHTLPYYLALMFFEILACIGTAFILGTITYWFAD----LNPGADKYFFAMAI--LTLAHLAGDFFMLIISCITVQVDTSFAVGAGVATIYQLFAGFFVPINALPKSFEWLHWCNFVYYSFEALMHNEFVGETVNCGQLACPTGRDVLINLGLNNRGK-GINLIIVSSFAFAFFTMVFLCLHYFHREKR 615
BLAST of NO12G03560 vs. NCBI_GenBank
Match: KYQ91489.1 (ABC transporter G family protein [Tieghemostelium lacteum]) HSP 1 Score: 274.2 bits (700), Expect = 1.200e-69 Identity = 197/636 (30.97%), Postives = 323/636 (50.79%), Query Frame = 0 Query: 167 SYTWRNIRCSYEANNQSRGGKPVVVEVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFG-EASGAEAWFSEQLGYPRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQFRSAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSDSIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHNAKWLQWTSFIKFTFQPLSMNVLRGTNV----EFVIDYISLNNPSTIWQNL-------GCAFAIYVGLT----LCAYLALRHLHKERR 787 +YT +N + Y+ N+Q K + +L+ V G +E GQMLA++GPSGSGK+ LLDILA RK G ISG L++G+ G + ++ +YVTQED T+TV+E + F A+L L + EK +++D+GL K +T VGG LPGG+ ++GLSGG+K+R+S+ C VT PSL+FLDEPTSGLD AL +M++L ++G+ V+C+IHQPR+ IW LF KVMVL G +Y G + G + E LGY +N + DF++D S + +Y E H + + D + + +I S++++++V+LGR ++ RN GN++AR++ + + L ++ + + + I+G +F+ + + L+P+A +SLF+ R ++ E AS+LY YF++ + +E + +L I + Y NV F L L + +C+ L + + D F +A+G L GF V+ + WL + + + + F +N + E +I N + + +N G +FA+ V T + +YL+L +L+KE+R Sbjct: 29 TYTVKNKK--YKKNSQKDKHKQKELTILNQVSGVIEPGQMLALMGPSGSGKSTLLDILAQRKETGTISGQILVNGKEIG-KAYKSFCSYVTQEDTLLQTATVQETLRFYADLTLP-TLSDEEKSERVKTVMQDIGLYEKANTLVGGVLPGGIILKGLSGGQKKRVSIGCALVTNPSLIFLDEPTSGLDSVTALSIMKILLGLTKKGVTVVCSIHQPRSEIWQLFNKVMVLVKGKMIYAGTDVMG----YYEGLGYTCPNNVNPADFVLD-------------------------------ASVEMGESAKYNEICAKWREHSQQESLIYDNQIHKDIPIAIPKQPSYIYQYKVLLGRAKRDFVRNYGNLVARVATSIVMGLLFGACFYGLDLNQN------DLQKIVGVVFFLVSGINLIPYACISLFLSGRALFNAERASRLYHSLPYFLATMTMEMIV-----VLAVTIGFVGTTYALAHLRWNVARFFYSLLVFFFLHI-LSDLCIVLISNITGTSDETFAIASGVSVIWQLFAGFFVTVDQLPKAFGWLHYINPLFYGFTSTMINEFEDRILICPKESIIP-CQYPNGNDLLKNFGIDDWTRGTSFAVVVAWTAFFFVASYLSLHYLNKEKR 612
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_013902403.1 (hypothetical protein MNEG_4578 [Monoraphidium neglectum] >KIZ03384.1 hypothetical protein MNEG_4578 [Monoraphidium neglectum]) HSP 1 Score: 270.4 bits (690), Expect = 1.800e-68 Identity = 200/617 (32.41%), Postives = 311/617 (50.41%), Query Frame = 0 Query: 164 APQSYTWRNIRCSYEANNQSRGGKPVVVEVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRR-MPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYC-QRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGY---PRHHNTSAVDFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQFRSAH----------------------------SNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQ----RTSDSIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVY----YNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSFYHN-AKWLQWTSFIKFTFQPLSMNVLRG 739 AP + W+ I CSY + EVL V G + G+M A++GPSG+GK+ +DILA RK++G +SG L++G + +RF + TAYV QED F PT T E + F A + L + P KD + ++ +VGL T VGG LPGGL +RGLSGGE++RL++ G + APS+LFLDEPTSGLD FAAL VM LK+ ++ +VI +IHQPR+AIW +F+ V +L+SG MY G G WF LGY P H + D+ +DLV I F K +G T+ T EL ++ F++ + SN A P S + L + +D+ A +W +++ + GR RNP +V R ++ + ++Y+ + + S L + +++ S + L+P+ S+ L+ D++FY +A+S+LY Y+++ I T S +F VY Y A + N +N V+YL + + + A++APNQD+AF+L+ + +L GF V+F + +L++ S ++F+ ++MN G Sbjct: 122 APSTLEWQGIGCSYMTPTGPK-------EVLADVWGIAQPGEMQALLGPSGAGKSTFMDILAMRKSIGNLSGRLLVNGARSS-KRFIKKTAYVPQEDNFVPTMTTWEVMSFYAEIILPGKWSPQRRKDRIR-EVLSEVGLAHAHRTIVGGMLPGGLMMRGLSGGERKRLAIATGILAAPSVLFLDEPTSGLDSFAALTVMGYLKRMVREQSHVVIASIHQPRSAIWLMFDAVTLLASGRLMYHGPREGITPWFG-SLGYHYDPSLHGVPS-DWALDLVAIGFAKPARFYG-HTITTRDELLSVSSNFKAHYLQENGLTGAESGEGKKDRLGNIIHVPSASNTAALASGGQSPSGARESAAGAGGNALLAEAKGGAAADATFASSAWK-QYKTLFGRELLAITRNPFDVAGRTLTFAWVGIVMGILYYGMPFNAGSARSRLNLVYMLLSFY------CLMPYISMGLYSADKKFYLSDASSQLYRPLAYYLAKISAITPFQIVSACVFGFTVYGMGGLRPGYEAVLK--NGFINTVMYL--------IATQVLHACAVIAPNQDVAFMLSILWTTIQLLLSGFFVNFPEVLNYWITYLRYISATYYSFEAVAMNEFGG 709
BLAST of NO12G03560 vs. NCBI_GenBank
Match: XP_005652310.1 (hypothetical protein COCSUDRAFT_45983 [Coccomyxa subellipsoidea C-169] >EIE27766.1 hypothetical protein COCSUDRAFT_45983 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 269.2 bits (687), Expect = 3.900e-68 Identity = 196/596 (32.89%), Postives = 295/596 (49.50%), Query Frame = 0 Query: 192 EVLHGVDGHLETGQMLAVIGPSGSGKTCLLDILADRKTVGKISGLRLLDGQLAGRRRFQRVTAYVTQEDIFHPTSTVKEAVLFQANLRLDRRMPVHEKDALALRLIEDVGLKGKEHTYVGGPLPGGLRVRGLSGGEKRRLSLCCGTVTAPSLLFLDEPTSGLDGFAALVVMRLLKKYCQRGMMVICTIHQPRAAIWTLFEKVMVLSSGNQMYFGEASGAEAWFSEQLGYPRHHNTSAV--DFIMDLVNISFVKDPDIHGSKTMQTVLELEQAAAQFR------------------------------------------SAHSNVAGRYIEAPPPLPRHHSLFNDLSDVSLTQRTSD----SIRALDSWVWKFRVVLGRNFTNYYRNPGNVLARISVMLFIAGLEALVYFRIGSREAGSTSLLTVTHIIGSIFYSILAVTLLPFASLSLFIYDRQFYSGEAASKLYPCSVYFVSNIVLETALNSFSGLLFSLIVYYNLDYIAFTQPANVPLNFVIYLSGLVLQTNMGSMCVQLSALLAPNQDIAFVLAAGYVAASILTGGFIVSFNSF-YHNAKWLQWTSFIKFTFQPLSMNVLRG 739 +VLH G+ G+ +A++GPSG+GK+ LLDIL+ RK+ GK+ G +++G+ G +F+R +AYV QED F PT + E + F A L L + + E VGG LPGG+ VRGLSGGEKRRL++ C ++APS+LFLDEPT+GLD FAAL VM + G +I +IHQPR+AIW +F+K +VLS G+ +YFG A WFS+ LGY + D++MDLV++ F K H S++M +V ++++AA F + + V GR + SL DL V Q S + SW +FR++L R RNP + +R+ + ++ L L ++ + S G S VT + +F+ +L LLPF +S ++ DR+F++ + ++ LY S Y++S+++ + L L Y L+GL L + CV L+ PNQD+A+VLA GYVAASIL GF + + + L + S+ K+ + +S L G Sbjct: 147 QVLHPSSGNAYPGECVALLGPSGAGKSTLLDILSLRKSSGKLKGQVMMNGRPLG-VQFKRNSAYVAQEDCFVPTMSAWETLKFTATLTLPKAI-------------------SPEDRRVGGALPGGILVRGLSGGEKRRLNIACALISAPSILFLDEPTTGLDSFAALNVMEHMSNLADLGHTIIASIHQPRSAIWDMFDKCVVLSEGHNLYFGSPKRALDWFSDALGYSYSYQRDGAVSDWLMDLVSVGFQKPASYH-SRSMCSVGDVQRAAVAFAKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAKVAPATTAPVVGRTRSSMGKAGSIASL-EDLEAVGKAQVKKQMEWASGKYAASWWTQFRILLNRAMLGQLRNPTDTTSRLFLSTWVGCLAGLAFYDLPS---GPDS---VTRRLALLFFILLLFELLPFCYMSFYVADRRFFAADISNDLYHPSAYYLSSVIASIPFVIINSLCGCLCAY--------------------GLAGLRLSAH-AVFCVWLT----PNQDLAYVLATGYVAASILLSGFYLRIDDMKLAVMRGLSYLSYTKYAMEAVSKLELSG 689 The following BLAST results are available for this feature:
BLAST of NO12G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03560 ID=NO12G03560|Name=NO12G03560|organism=Nannochloropsis oceanica|type=gene|length=4578bpback to top protein sequence of NO12G03560.1 >NO12G03560.1-protein ID=NO12G03560.1-protein|Name=NO12G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=787bpback to top Synonyms
Publications
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