NO12G03420, NO12G03420 (gene) Nannochloropsis oceanica

Overview
NameNO12G03420
Unique NameNO12G03420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2272
Alignment locationchr12:938029..940300 +

Link to JBrowse

Properties
Property NameValue
DescriptionCation diffusion facilitator family
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:938029..940300 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR036837Cation_efflux_CTD_sf
IPR027469Cation_efflux_TMD
IPR027470Cation_efflux_CTD
IPR002524Cation_efflux
Homology
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_005853956.1 (cation diffusion facilitator family [Nannochloropsis gaditana CCMP526] >EKU22400.1 cation diffusion facilitator family [Nannochloropsis gaditana CCMP526] >EWM25699.1 cation diffusion facilitator family [Nannochloropsis gaditana])

HSP 1 Score: 594.3 bits (1531), Expect = 3.100e-166
Identity = 336/484 (69.42%), Postives = 360/484 (74.38%), Query Frame = 0
Query:    1 MPRSTLGWGGATGEE----------GKSNGNGRHVHVSFDDEKASLLRHGPGCNNSKKGLVAEARDVDESPRITYGGTFAPSGSAPLTAE-----XXXXXXXXXXRPSISIVDGYNSPVRRGGARNTME-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVIARREVEQVEHLSNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHKI 465
            MP + LG  G   +E          G +NG G+ + +S DDEK SLLR G     S K   AEARD D++  I  GGTF    S PL AE               +PSISIVDGYNSPVRRGG R+ ME                                            CVIARRE EQ E LSNKVRFAVHASI ANV LS  SAYAA RSGSLAVLASLVDTLLDLISQVVLSVAEH MRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGT+V+A+AYGKLPHLDMEPVT+GIM+ AVGVK+ LYLYSSTLAG+SGTAEALAEDH+NDIMTNSFSV+SST AHYYPKAW VDPIGAI+ISCLIFYNWLHVGMDHASKIVGLSAPPETLE I++LAG HH QLELDIIRAYHFGPNFLVELEVVLP +M+VKEAHDIALGLQQKVE QSFVERCFVHVDYQ RGYNEHKI
Sbjct:    1 MPETGLGSEGLVIQECMTISRIDGPGYANGAGKGLRLSLDDEKTSLLRGGEAGGPSAKH--AEARDSDDNGGIN-GGTFTQITSTPLMAEGQSSHGHQAGQHAARKPSISIVDGYNSPVRRGGYRSYMEVDEEAAAGSLSRNGWTSGNNGGIIHRYGSGDAGSHVPPHACQDHCVIARRETEQAERLSNKVRFAVHASICANVLLSMASAYAAFRSGSLAVLASLVDTLLDLISQVVLSVAEHGMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTLVLAIAYGKLPHLDMEPVTVGIMVCAVGVKLSLYLYSSTLAGVSGTAEALAEDHKNDIMTNSFSVLSSTVAHYYPKAWFVDPIGAIVISCLIFYNWLHVGMDHASKIVGLSAPPETLEHISDLAGQHHAQLELDIIRAYHFGPNFLVELEVVLPWDMNVKEAHDIALGLQQKVEQQSFVERCFVHVDYQVRGYNEHKI 481          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_008871198.1 (hypothetical protein H310_07576 [Aphanomyces invadans] >ETW00173.1 hypothetical protein H310_07576 [Aphanomyces invadans])

HSP 1 Score: 279.3 bits (713), Expect = 2.200e-71
Identity = 149/299 (49.83%), Postives = 205/299 (68.56%), Query Frame = 0
Query:  165 EHLSNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            E  S KV+ A+ +SI  NV L+    YAA+ SGSLAVL+SLVD++LDL SQ +   ++  M  P +E YPAGR R+EP+ V++ + +MG+A+LE+++ SV T++     G LP LDM  +TI ++ VA+ VK+ L+     +A +S +A ALA+DHRND+ +N  +V +S  AHYY   W  DPIGAI IS  I  +W+  G +   ++VGL A  + +E +  +A  HH +L+ DIIRAYHFG NFLVELEVVLP +MSV+E+HDI+L LQ KVE    VER FVHVDYQ+R Y+EHK
Sbjct:   48 EAASQKVQLAITSSIVINVLLAIAKTYAAVSSGSLAVLSSLVDSILDLTSQALFWFSDRYMHTP-NEKYPAGRRRLEPIAVVVSATLMGMASLEVVQKSVTTLIEGFG-GHLPELDMSILTIAVLGVAITVKLMLWFICGQIAYVSPSAAALAQDHRNDVFSNLVAVSTSLMAHYYSGLWYFDPIGAIAISIYITLSWVATGKEQVERLVGLQADEDFIERVRAIADAHHPKLQSDIIRAYHFGNNFLVELEVVLPKDMSVQESHDISLALQIKVEALDEVERAFVHVDYQSRDYDEHK 344          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: OQR99797.1 (Cation Diffusion Facilitator (CDF) Family [Achlya hypogyna])

HSP 1 Score: 278.9 bits (712), Expect = 2.900e-71
Identity = 145/296 (48.99%), Postives = 205/296 (69.26%), Query Frame = 0
Query:  168 SNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            S +V+ A+ ASI  NV L+A   YAA+ SGSLAVL+SLVD++LDL SQ +    +  M  P  E YPAGR R+EP+ V++ + +MG+A+LE+++ S+ T+V     G LP LDM  +TI ++ VA+ VK+ L+     +A +S +A ALA+DHRND+ +N  +V +S  AHY  + W +DPIGAI IS  I ++WL  G +   ++VG+ A  + +E +  +A +HH Q++ DI+RAYHFG NFLVELEVV+P  M+V +AHDI+L LQ+KVE    VER FVHVDYQ+R Y+EHK
Sbjct:   45 SQRVQLAISASIVINVILAAAKTYAAVMSGSLAVLSSLVDSILDLTSQGLFWFTDRYMHTP-HESYPAGRRRLEPIAVVVSATLMGMASLEVVQKSIATLVEGFK-GDLPELDMSILTICVLAVAIVVKLALWFLCGQIAHVSPSAAALAQDHRNDVFSNGVAVTTSMIAHYNTELWYLDPIGAICISFYITWSWLATGKEQVDRLVGIQADEDFIERVRAIADSHHPQMQSDIVRAYHFGNNFLVELEVVMPKTMTVGDAHDISLALQKKVEELDAVERAFVHVDYQSRDYDEHK 338          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_008608917.1 (hypothetical protein SDRG_05001 [Saprolegnia diclina VS20] >EQC37397.1 hypothetical protein SDRG_05001 [Saprolegnia diclina VS20])

HSP 1 Score: 273.9 bits (699), Expect = 9.400e-70
Identity = 140/296 (47.30%), Postives = 205/296 (69.26%), Query Frame = 0
Query:  168 SNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            S +V+ A+ ASI  N+ L+    YAA+ SGSLAVL+SLVD++LDL SQ +    +  M  PS + YPAGR R+EP+ V++ + +MG+A+LE+++ S+ T++     G +P LDM  +TI ++ VA+ VK+ L+   + +A +S +A ALA+DHRND+ +N  +V +S  AHY   AW +DPIGAI IS  I ++WL  G +   ++VG+ A  + ++ I  +A +HH  ++ DI+RAYHFG NFLVELEVV+P  M+V +AHDI+L LQ+KVE    VER FVHVDY++R Y+EHK
Sbjct:   44 SQRVQLAISASIVINIILAIAKTYAAVVSGSLAVLSSLVDSILDLTSQGLFWFTDRYMHTPSPD-YPAGRRRLEPIAVVVSATLMGMASLEVVQKSIATLIEGF-NGHVPELDMSILTIAVLAVAIVVKLILWFLCAQIAHVSPSAAALAQDHRNDVFSNGVAVTTSMIAHYNIDAWYLDPIGAICISIYITWSWLETGKEQVDRLVGIQADEDFIQRIHAIADSHHPDMQSDIVRAYHFGNNFLVELEVVMPKSMTVGDAHDISLALQKKVEELDAVERAFVHVDYESRDYDEHK 337          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_009831175.1 (hypothetical protein H257_07371 [Aphanomyces astaci] >ETV79334.1 hypothetical protein H257_07371 [Aphanomyces astaci])

HSP 1 Score: 273.9 bits (699), Expect = 9.400e-70
Identity = 146/299 (48.83%), Postives = 206/299 (68.90%), Query Frame = 0
Query:  165 EHLSNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            E  S KV+ A+ +SI  NV L+    YAAI SGSLAVL+SLVD++LDL SQ +   ++  M  P+ + YPAGR R+EP+ V++ + +MG+AALE+++ SV T++     G+LP LDM   T+ ++ +A+ VK+ L+     +A +S +A ALA+DHRND+ +N+ +V +S  AHY  + W  DPIGAI IS  I  +W+  G +   ++VGL A  + ++ +  +A  HH +L+ DIIRAYHFG NFLVELEVVLP +MSV+E+HDI+L LQ KVE    VER FVHVDYQ+R Y+EHK
Sbjct:   48 EAASQKVQLAITSSIIINVILAIAKTYAAITSGSLAVLSSLVDSILDLTSQGLFWFSDRYMHTPNAK-YPAGRRRLEPIAVVVSATLMGMAALEVVQKSVTTLIEGFG-GQLPELDMSIPTVAVLGIAIIVKLMLWFLCGQIAYVSPSAAALAQDHRNDVFSNAVAVTTSLVAHYNSELWYFDPIGAIAISIYITLSWVATGKEQVERLVGLQADQDFIDRVRTIADAHHPKLQSDIIRAYHFGNNFLVELEVVLPKDMSVQESHDISLALQIKVEALDEVERAFVHVDYQSRDYDEHK 344          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_012207790.1 (hypothetical protein SPRG_12487 [Saprolegnia parasitica CBS 223.65] >KDO21523.1 hypothetical protein SPRG_12487 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 272.3 bits (695), Expect = 2.700e-69
Identity = 138/296 (46.62%), Postives = 204/296 (68.92%), Query Frame = 0
Query:  168 SNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            S +V+ A+ ASI  N+ L+    YAA+ SGSLAVL+SLVD++LDL SQ +    +  M  PS + YPAGR R+EP+ V++ + +MG+A+LE+++ S+ T++     G LP LDM  +TI ++ +A+ VK+ L+   + +A +S +A ALA+DHRND+ +N+ +V +S  AHY  + W +DPIGAI IS  I ++WL  G +   ++VG+ A  + +  I  +A  HH  ++ DI+RAYHFG NFLVELEV++P  M+V +AHDI+L LQ+KVE    VER FVHVDY++R Y+EHK
Sbjct:   44 SQRVQLAISASIVINIILAIAKTYAAVVSGSLAVLSSLVDSILDLTSQGLFWFTDRYMHTPSPD-YPAGRRRLEPIAVVVSATLMGMASLEVVQKSIATLIEGF-NGHLPELDMSILTIAVLAIAIVVKLILWFLCAQIAHVSPSAAALAQDHRNDVFSNAVAVTTSMIAHYNVEMWYLDPIGAICISIYITWSWLETGKEQVDRLVGIQADEDFIARIDGIADTHHPDMQSDIVRAYHFGNNFLVELEVIMPKSMTVGDAHDISLALQKKVEELDAVERAFVHVDYESRDYDEHK 337          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: GAX94066.1 (Hypothetical protein PINS_001965 [Pythium insidiosum])

HSP 1 Score: 268.5 bits (685), Expect = 4.000e-68
Identity = 140/308 (45.45%), Postives = 204/308 (66.23%), Query Frame = 0
Query:  156 IARREVEQVEHLSNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            + RR  +     S +V  A+  S+  NV L+    YA   SGSLAVL+SLVD++LDL SQ +   ++ RM  P + +YPAG+ R+EPV V+I + +MG+AA+E+++ SV T+V+    G LP LDM   TI +++ A+G+K+ L++  S +   S +A ALA+DHRND+ +N  +V +S  AH++   W  D IGAI IS  I Y+WL  G +   +++GL A P+ +E + E++  HH Q+  DI+RAYHFG N+LVE+EV+LP+ M V++AHDI+L LQ KV     VER FVHVDY +R Y+EHK
Sbjct:   99 LLRRASDSETTSSARVEIAIRVSLIINVILATAKTYAVFASGSLAVLSSLVDSILDLTSQWLFWYSDKRMHTP-NINYPAGQRRLEPVAVVISATLMGMAAIEVVQKSVETLVIGF-NGTLPDLDMTRFTICVLIFAIGIKIVLWIICSRIGQTSTSAAALAQDHRNDVFSNVVAVTTSMIAHWHRDLWYADSIGAIFISIYIAYSWLETGKEQVERLIGLRATPDFVEQVREISDLHHPQMTTDIVRAYHFGSNYLVEIEVILPANMCVRDAHDISLALQTKVXELDNVERAFVHVDYLSRDYDEHK 404          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: CCA18901.1 (Cation Diffusion Facilitator (CDF) Family putative [Albugo laibachii Nc14])

HSP 1 Score: 268.1 bits (684), Expect = 5.200e-68
Identity = 144/313 (46.01%), Postives = 209/313 (66.77%), Query Frame = 0
Query:  155 VIARREVEQVEHL----SNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            +I ++  E++E +    S  V   + AS+ AN+ L+    YAAI SGSLAVL+SLVD++LDL SQ +   ++ RM  PS + YPAGR R+EP+ VII + +MG+AALE+++ +V T+++    G LP++ M   TI ++L A+  K  L+     +   S TA A+A+DHRND+++NS +VI+S  A  +   W +D +GAILIS  I  +WL  G +   ++VGL A P  ++ +     NHH +++ DIIRAYHFG N+LVE+EV+LP +MSV+EAHDI+L LQ+K+E    VER FVHVDY  RGY+EHK
Sbjct:   52 LIHKQNGEEIEIVPAATSRHVGSVIRASLIANIILACGKLYAAINSGSLAVLSSLVDSILDLTSQGLFWFSDKRMHTPSSK-YPAGRRRLEPIVVIISATLMGMAALEVIQKAVETLIIGYE-GTLPNIKMNQFTIAVLLFAISTKTILWYLCFRIGLTSPTARAIAQDHRNDVLSNSAAVITSLTAKLHTNLWYIDSVGAILISLYIAISWLATGSEQVQRLVGLQADPVFIDKLRNFTNNHHPKMQADIIRAYHFGSNYLVEVEVILPEKMSVREAHDISLDLQRKIEEFDNVERAFVHVDYLARGYDEHK 362          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: CCI45129.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 267.7 bits (683), Expect = 6.700e-68
Identity = 145/313 (46.33%), Postives = 208/313 (66.45%), Query Frame = 0
Query:  155 VIARREVEQVEHL----SNKVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            +I ++  E+V+ +    S  V   + AS  AN+ L+    YAAI SGSL+VL+SLVD++LDL SQ +   ++ RM  PS   YPAGR R+EP+ VII + +MG+AALE+++ +V T+++    G LP ++M  +TI ++L A+  K  L+     +   S TA+ALA+DHRND+++N  +VI+S     +   W VD +GAILIS  I  +WL  G +   ++VGL A P  +E + +   NHH Q++ DIIRAYHFG N+LVE+EV+LP +MSV+EAHDI+L LQ+K+E    VER FVHVDY  RGY+EHK
Sbjct:   51 LIHKQNGEEVQMIPAATSRHVGSIIRASFIANILLACGKLYAAISSGSLSVLSSLVDSILDLTSQGLFWFSDKRMHTPS-SRYPAGRRRLEPIAVIISATLMGMAALEVIQKAVETLIIGYE-GTLPSINMTQLTIAVLLFAISTKTILWYLCYRIGLTSPTAKALAQDHRNDVLSNIAAVITSLTTKVHENLWYVDSVGAILISLYIAISWLATGSEQVQRLVGLQADPVFIEKLRDFTNNHHPQMQADIIRAYHFGSNYLVEVEVILPEKMSVREAHDISLDLQKKIEEFDSVERAFVHVDYLARGYDEHK 361          
BLAST of NO12G03420 vs. NCBI_GenBank
Match: XP_024584235.1 (cation diffusion facilitator family [Plasmopara halstedii] >CEG47866.1 cation diffusion facilitator family [Plasmopara halstedii])

HSP 1 Score: 265.8 bits (678), Expect = 2.600e-67
Identity = 147/315 (46.67%), Postives = 213/315 (67.62%), Query Frame = 0
Query:  155 VIARREVEQVEHLSN------KVRFAVHASIFANVFLSAVSAYAAIRSGSLAVLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSVIMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLYLYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIGAILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELDIIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFVHVDYQTRGYNEHK 464
            ++ + E  +V+HLS+      +V+ A++AS+ ANV L+ V  YAA+ SGSLAVL+SLVD++LDL SQ +   ++ RM  PS + YPAGR R+EP+ VII + +MG+AA+E+++ SV  +V     G L  +D+   T+ ++LVA+ VK+ L+   + +A  S +A+ALA+DHRND+ +N  +V ++  AH +P  W +D IGAI+IS  I  +WL  G +   ++VGL A  E ++ I  L   HH  ++ DI+RAYHFG N+LVE+EV+LP +M VKEAHDI+L LQ KVE    VER FVHVDY  R Y+EHK
Sbjct:   42 LLKKEEDAEVQHLSSPSSAALRVQVAINASLAANVVLTIVKIYAALTSGSLAVLSSLVDSILDLTSQALFWYSDKRMHTPSVK-YPAGRRRLEPIAVIISATLMGMAAIEVIQQSVKALVKGF-NGHLREIDISSFTLIVLLVAIVVKLFLWYICAKIASHSPSADALAQDHRNDVYSNLVAVSAAFVAHKHPSLWCLDSIGAIVISVYIAVSWLATGKEQVERLVGLQAEQEFIDHIRTLGDVHHPLMKTDIVRAYHFGNNYLVEMEVILPEDMCVKEAHDISLSLQIKVEGLDNVERAFVHVDYLERNYDEHK 354          
The following BLAST results are available for this feature:
BLAST of NO12G03420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853956.13.100e-16669.42cation diffusion facilitator family [Nannochlorops... [more]
XP_008871198.12.200e-7149.83hypothetical protein H310_07576 [Aphanomyces invad... [more]
OQR99797.12.900e-7148.99Cation Diffusion Facilitator (CDF) Family [Achlya ... [more]
XP_008608917.19.400e-7047.30hypothetical protein SDRG_05001 [Saprolegnia dicli... [more]
XP_009831175.19.400e-7048.83hypothetical protein H257_07371 [Aphanomyces astac... [more]
XP_012207790.12.700e-6946.62hypothetical protein SPRG_12487 [Saprolegnia paras... [more]
GAX94066.14.000e-6845.45Hypothetical protein PINS_001965 [Pythium insidios... [more]
CCA18901.15.200e-6846.01Cation Diffusion Facilitator (CDF) Family putative... [more]
CCI45129.16.700e-6846.33unnamed protein product [Albugo candida][more]
XP_024584235.12.600e-6746.67cation diffusion facilitator family [Plasmopara ha... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010302NSK010302Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03420.1NO12G03420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100222g4gene4813Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03420.1NO12G03420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03420 ID=NO12G03420|Name=NO12G03420|organism=Nannochloropsis oceanica|type=gene|length=2272bp
CATTGCTTCGTTCCCCACGTTAACGGTTCACTTGGTGAGAGCCTGATTCG
ATTCTGCCGTCCTGTCATGCATGCCTGCGCCACCACAATCAGCGCCTCCA
CTACAATAACACATACGTATAGGAAGAAACTATGCTACTGTGATTGATCA
CGTGGAGTCGTGGCCTCGCATGACTCGCCGCCCCTCCGCTGCAATGTCGC
TACTTTTCTTCTTTTTGCTGGCTTGCCCTTTCTTGGTCTGCCTTCGCTTA
CCCTTGTATTAAAGCCCCTCACATCTGTAAAAGAGTCCAGGGGATGCACG
CACTATCCTGTTTTTACATGGATCTCGGGTATTGGCCATGCAACCTCTCA
CATCCGCCGTTCCTCGCTCCCACAGGCAGTTTCCTGAATCCCTTCTTTGC
TGCCGTAAGAAACAAGTCGCCAGGAAGCCAAGCCAAGCGACTCAAGCATG
CCACGTAGCACCCTCGGATGGGGCGGGGCAACGGGTGAGGAAGGCAAGAG
CAATGGGAATGGGAGGCATGTTCATGTCTCGTTTGACGATGAAAAAGCGT
CCCTCTTGCGACACGGTCCCGGCTGCAACAACAGCAAGAAAGGCCTTGTG
GCCGAGGCTCGCGATGTCGATGAAAGTCCGAGAATTACATATGGGGGGAC
CTTTGCTCCCTCGGGATCCGCACCTCTGACGGCGGAGGAGCAGCACCACC
ACCGCCACCACACCCGCAGGCCCTCAATCTCGATTGTGGATGGGTACAAC
AGCCCTGTGCGTCGGGGTGGGGCACGGAACACCATGGAAATGGAAGGGGA
AGCAACGGCAACGATATCCGTGGGCAGTTCTGGTGGAAGCGGGAGTGTGA
GCGGTGGTATCTTTCATCACCACGAGAATGCGGGGCATGGCCACAGCCAC
GACCATTGTGTAATTGCGAGACGGGAGGTGGAACAAGTGGAACACCTGAG
TAATAAAGTCCGATTCGCCGTACATGCATCTATTTTTGCGAATGTCTTCT
TGTCGGCTGTTAGCGCGTATGCCGCAATACGTTCAGGATCTTTGGCGGTG
CTGGCTTCTTTAGTGGATACCCTCCTTGACCTTATTTCCCAAGTCGTCCT
TTCCGTCGCCGAGCACCGCATGCGAAAGCCCTCTGATGAGCATTACCCTG
CCGGGCGCTCGCGGATCGAGCCGGTCGGTGTTATCATTGTGTCTGTCATC
ATGGGGGTGGCGGCGCTCGAGTTGTTGAGGGCGTCGGTCGGAACCATGGT
CATGGCGCTGGCCTATGGAAAGCTACCTCATTTGGgtgagtgagttacat
tgggaaagatgtgagggagagagggtatagagcaagggttcaacagagag
cgagaggaatcgagcgccagcttgtcgtcagtgagcgtgtttagataaag
agacgaaagtaaagggaaccgcgtgcacctgactaatccttcgccctccc
ttttcccctccttctcgccctcccttcccttccatcactcgcttagACAT
GGAACCCGTCACCATCGGGATCATGCTCGTTGCCGTCGGTGTCAAAGTAT
GCCTCTACCTCTACTCAAGCACCCTGGCAGGAATATCCGGCACGGCCGAA
GCCCTCGCGGAGGACCACAGAAACGATATCATGACAAATTCTTTCTCTGT
CATTTCCTCTACCTTCGCGCACTACTACCCCAAGGCCTGGGTAGTCGACC
CAATCGGCGCCATCCTCATTTCCTGCCTCATTTTCTACAATTGGCTGCAT
GTGGGGATGGACCATGCTAGCAAAATTGTCGGTCTCTCTGCTCCTCCTGA
GACACTTGAAACCATAACAGAGCTCGCCGGCAATCATCACACTCAGCTCG
AGTTGGATATCATTCGTGCGTATCACTTTGGTCCCAATTTCCTCGTTGAA
TTGGAGGTGGTGTTACCCAGCGAGATGAGCGTAAAGGAGGCCCACGACAT
TGCGTTGGGGCTGCAGCAGAAGGTGGAAATGCAGAGTTTTGTGGAGCGTT
GTTTTGTGCATGTGGATTATCAGACGAGAGGGTATAATGAGCATAAAATA
TAGGAGAGGGGGAGGGAGGGAGGAAGGGACGTGTAAATTAGAATGGGGGA
AATCGAGGAGGGAGGACAGCGAAATATGAGGATGCAAGGATACCACCTCG
AGATGACAACAGAAGAGCAATAACAAGAATGAGAAACAGGAGATTGGCGA
AAGAATAGCGAAATGTAAGATGAAATAATGTTTTGGCATCGATATGTGAT
GATACAACAGACCCCTTCGTTG
back to top

protein sequence of NO12G03420.1

>NO12G03420.1-protein ID=NO12G03420.1-protein|Name=NO12G03420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MPRSTLGWGGATGEEGKSNGNGRHVHVSFDDEKASLLRHGPGCNNSKKGL
VAEARDVDESPRITYGGTFAPSGSAPLTAEEQHHHRHHTRRPSISIVDGY
NSPVRRGGARNTMEMEGEATATISVGSSGGSGSVSGGIFHHHENAGHGHS
HDHCVIARREVEQVEHLSNKVRFAVHASIFANVFLSAVSAYAAIRSGSLA
VLASLVDTLLDLISQVVLSVAEHRMRKPSDEHYPAGRSRIEPVGVIIVSV
IMGVAALELLRASVGTMVMALAYGKLPHLDMEPVTIGIMLVAVGVKVCLY
LYSSTLAGISGTAEALAEDHRNDIMTNSFSVISSTFAHYYPKAWVVDPIG
AILISCLIFYNWLHVGMDHASKIVGLSAPPETLETITELAGNHHTQLELD
IIRAYHFGPNFLVELEVVLPSEMSVKEAHDIALGLQQKVEMQSFVERCFV
HVDYQTRGYNEHKI*
back to top
Synonyms
Publications