NO12G03330, NO12G03330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03330 vs. NCBI_GenBank
Match: EWM25708.1 (nucleosome chromatin assembly complex protein [Nannochloropsis gaditana]) HSP 1 Score: 336.3 bits (861), Expect = 1.500e-88 Identity = 210/370 (56.76%), Postives = 257/370 (69.46%), Query Frame = 0 Query: 84 DKNNTEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAEG-AREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKK-----EEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFA-PNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYPRQAGRPRRGGR 447 D+ + + + ASPFANTTFSFTAPQGG + PFP+L+GF QALA AA+G A +APEVQVRI+YLK LQ++R+ KR A+L G +DV+++ E+ E A EG EG G+P+FWL+ +++ RL+ GM++E+DV ALK+L D++C DKEDG GF L FHFA PNPYFTN VLSK+Y VPNLM+D +A+L++ GT I+W S K+NLC+EEKRMKPKGKSRGGVV+KQ+KK+SFF+WF AV LM +LD DYAVAS LREEIVPEAIKWYLGEG+ XXXXXXXXXXXXXXXXXXXXXXXXX R PRQ GRPRRGGR Sbjct: 3 DEASKKPEGASPFANTTFSFTAPQGGVTGPFPSLSGFQQALADAAQGAAXXXXXXXVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVXXXXXXXXXXXXXXXXLMGKLDYDYAVASILREEIVPEAIKWYLGEGEEDESEYADSXXXXXXXXXXXXXXXXXXXXXXXXXQRRPRQPGRPRRGGR 372
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_002295466.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >ACI64183.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 166.4 bits (420), Expect = 2.000e-37 Identity = 97/263 (36.88%), Postives = 136/263 (51.71%), Query Frame = 0 Query: 139 LAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINW----TSTKKNLCVEEKRMKPKGKSRGGV--VLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 L P + RI LK+L E RD +RR ++ + +VE EG E GD G+P FW AM + ++ +I E+DV L FLTDI D DG GF L FHF+PNPYFTN L+K+Y VPNL+ +++ +L++ GTTINW + T K +K+ K G G + V K + DSFFH+FT +P + +DEEE + + E D DY +A R I+P+A+ W+ GE Sbjct: 21 LPPCILPRISKLKSLNEARDAILEEYKVERAALERRYKEKMEPLFVERRGVVFAEGEVED-----VVSDNEGDEVGDEVVKGIPQFWACAMGHVDVIGELITEEDVDCLDFLTDITSTDSTDGQGFSLTFHFSPNPYFTNTTLTKTYEVPNLLTEDEPILQNVTGTTINWKPGQSLTHKE--TSKKQRKKSGPQAGQIRTVKKLERTDSFFHFFTPPKMPSLGDIIDEEEADAMEEMFDHDYDIAQAFRGSIIPKAVLWFTGE 276
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_003058442.1 (Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545] >EEH56897.1 Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 163.7 bits (413), Expect = 1.300e-36 Identity = 101/286 (35.31%), Postives = 146/286 (51.05%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEA--GVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKED------------------------GTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L +V+ R++ L LQE D KR I+ G DV+ A G + + +EA G+P FWL A+ N + I E D PALKFL DI C +D GF+LDFHF NPYF+N VLSKSY +++++ED +LES EGT I W + KNLCV+ R KP KG +G + K K DSFF++F+ ++P + + EEE E+L + +++DY + + ++E+I+P+AI W+ GE Sbjct: 61 ESLHYKVRARVNALTTLQESHDELYEKYLDEKRALEAKYRDLYAPLYVKRAGIVKGAEDVD---------ATPGEDDDETEEAPVGIPDFWLCALRNHEIFEQQITEKDEPALKFLNDITCTPLQDLPVDXXXXXXXXXXXXXXXXXXXXQRGFRLDFHFDENPYFSNEVLSKSY---HMVDEEDPILESAEGTDIEW-AQGKNLCVKVLRKKPKKGDKKGKPITKTEKADSFFNFFSPPDVPGEGDDLTEEEAEQLQDFMEMDYEMGAIIKEKIIPDAISWFTGE 333
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_003597592.1 (nucleosome assembly protein 1;4 [Medicago truncatula] >ABD28504.1 Nucleosome assembly protein (NAP) [Medicago truncatula] >AES67843.1 nucleosome assembly protein [Medicago truncatula]) HSP 1 Score: 162.2 bits (409), Expect = 3.800e-36 Identity = 104/299 (34.78%), Postives = 156/299 (52.17%), Query Frame = 0 Query: 106 PQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVK---EAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 P A+ + AG AL + G R + E L+P V+ R++ LK LQ + D KR I++G +DV E I E G+G + K E GVP FWL AM + +L I E D ALK+L DI+ + ++ GF+L+F+F NPYF N+VL+K+Y +++ED+D +LE + GT I W K C+ +K MK KG ++K K DSFF+ F +IPE + +D++ EEL ++ DY + ST+R++I+P A+ W+ GE Sbjct: 9 PAAAAALSAEDRAGLVNALKDKLQLLAGDRVDVMETLSPNVKQRVEVLKVLQSEHDELESKYLEERAQLEAKYQKLYEPLYTKRYEIVNGVIDV-------EGITNEAGQGEESKAAEEKGVPSFWLTAMKTNEILGEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTY---HMIEDDDPILEKSIGTEIEWHPGK---CLTQKVMKKKPKKGSKNAKPIIKTEKCDSFFNIFNPPHIPEDDDEIDDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGE 294
BLAST of NO12G03330 vs. NCBI_GenBank
Match: EMS55560.1 (Nucleosome assembly protein 1-like 1-A [Triticum urartu]) HSP 1 Score: 160.2 bits (404), Expect = 1.500e-35 Identity = 89/259 (34.36%), Postives = 140/259 (54.05%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L+P V+ R+++L+ +Q Q D KR I++G V+V+ A E + EGGD GVP FWL A+ + +L I+E D P LK+L DI+ + +D GF+L+F F NP+F N+VL+KSY ++++++D +LE GT I W K K+ KG + K + +SFF++F+ +PE E +DEE +EL Q++ DY + ST+R++I+P A+ W+ GE Sbjct: 146 ESLSPNVRRRVEFLRGIQSQHDEIETKFFEERAALEAKYQKLYEPLYAKRYDIVNGVVEVD--GVAKEPTTENAAEGGDSDAKGVPDFWLTALKTNDVLTEEIQERDEPVLKYLKDIKWSRIDDPKGFKLEFFFDTNPFFKNSVLTKSY---HMVDEDDPILEKAIGTEIEWYPGKNVTQKILKKKPKKGSKNTKPITKTEECESFFNFFSPPQVPEDDEDIDEEAADELQGQMEHDYDIGSTIRDKIIPHAVSWFTGE 399
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_009606365.1 (PREDICTED: nucleosome assembly protein 1;3 [Nicotiana tomentosiformis]) HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35 Identity = 93/263 (35.36%), Postives = 145/263 (55.13%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L+P V+ R++ L+ +Q Q D KR I++G V+V+ EA +T + E D E GVP FW+ AM N+ +L I E D ALKFL DI+ + E+ GF+L+F F NPYFTN VL+K+Y +++++++ +LE GT I W K C+ +K +K K K +G K + K +SFF++F+ +P+ E +DE+ EEL ++ DY + ST+R++I+P A+ W+ GE Sbjct: 45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEVD--GEATQTAVADEEEDKDAVEKGVPDFWITAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPK-KGSKNTKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_016503801.1 (PREDICTED: nucleosome assembly protein 1;3-like [Nicotiana tabacum]) HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35 Identity = 93/263 (35.36%), Postives = 145/263 (55.13%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L+P V+ R++ L+ +Q Q D KR I++G V+V+ EA +T + E D E GVP FW+ AM N+ +L I E D ALKFL DI+ + E+ GF+L+F F NPYFTN VL+K+Y +++++++ +LE GT I W K C+ +K +K K K +G K + K +SFF++F+ +P+ E +DE+ EEL ++ DY + ST+R++I+P A+ W+ GE Sbjct: 45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEVD--GEATQTAVADEEEDKDAVEKGVPDFWITAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPK-KGSKNTKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_019240635.1 (PREDICTED: nucleosome assembly protein 1;3 isoform X1 [Nicotiana attenuata] >OIT20097.1 nucleosome assembly protein 13 [Nicotiana attenuata]) HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35 Identity = 92/262 (35.11%), Postives = 143/262 (54.58%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L+P V+ R++ L+ +Q Q D KR I++G V+V EA +T A + E D E GVP FW+ AM N+ +L I E D ALKFL DI+ + E+ GF+L+F F NPYFTN VL+K+Y +++++++ +LE GT I W K C+ +K +K KG + K + +SFF++F+ +P+ E +DE+ EEL ++ DY + ST+R++I+P A+ W+ GE Sbjct: 45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEV--VGEATQTAAADKEEDKDAVEKGVPDFWVTAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPKKGSKNSKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_019240636.1 (PREDICTED: nucleosome assembly protein 1;3 isoform X2 [Nicotiana attenuata]) HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35 Identity = 92/262 (35.11%), Postives = 143/262 (54.58%), Query Frame = 0 Query: 137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396 E L+P V+ R++ L+ +Q Q D KR I++G V+V EA +T A + E D E GVP FW+ AM N+ +L I E D ALKFL DI+ + E+ GF+L+F F NPYFTN VL+K+Y +++++++ +LE GT I W K C+ +K +K KG + K + +SFF++F+ +P+ E +DE+ EEL ++ DY + ST+R++I+P A+ W+ GE Sbjct: 45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEV--VGEATQTAAADKEEDKDAVEKGVPDFWVTAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPKKGSKNSKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_008609365.1 (hypothetical protein SDRG_05429 [Saprolegnia diclina VS20] >EQC37203.1 hypothetical protein SDRG_05429 [Saprolegnia diclina VS20]) HSP 1 Score: 158.7 bits (400), Expect = 4.200e-35 Identity = 96/270 (35.56%), Postives = 147/270 (54.44%), Query Frame = 0 Query: 134 EDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDV----EKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGG--VVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGD 398 E + L P V R+ +LK LQEQ+ +R +++G+ +V EK EEA ++ G+P FW++A++N ++ MI + D+PAL+FL +++ + GF+L+FHFAPN +FTN VL+K Y V DAML++ GT INW + KNLC ++K++K K K+ G +V K DSFF +F+ V +P E EEE +E+M QLD D+ + T+ E IVP+A+ W+ GE + Sbjct: 20 EAEVVLPPAVAARVAHLKTLQEQQAVIEAQFEEERRQLELKYEKLYQPLYDERALVVTGEKEVASADEKAEEAEPSV-------------GIPKFWVKALMNHPMIEQMITDRDIPALEFLKNVKSESLTETNGFRLEFHFAPNEFFTNDVLTKVYDVAE-GPSGDAMLKNIVGTPINW-NEGKNLCEKKKKIKQKAKNGGATRLVTKIEPCDSFFQFFSPVEMPTEDE---EEESDEIMHQLDTDFQIGFTIHETIVPQAVLWFTGEAE 271 The following BLAST results are available for this feature:
BLAST of NO12G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03330 ID=NO12G03330|Name=NO12G03330|organism=Nannochloropsis oceanica|type=gene|length=2575bpback to top protein sequence of NO12G03330.1 >NO12G03330.1-protein ID=NO12G03330.1-protein|Name=NO12G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bpback to top Synonyms
Publications
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