NO12G03310, NO12G03310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G03310 vs. NCBI_GenBank
Match: EWM25718.1 (Drug/metabolite transporter [Nannochloropsis gaditana]) HSP 1 Score: 336.7 bits (862), Expect = 6.900e-89 Identity = 177/225 (78.67%), Postives = 197/225 (87.56%), Query Frame = 0 Query: 1 MIVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADRSEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVSW 226 ++VFPLFFIANFSYN+SLAHTSVTSNTIISTTSSLWTFLFSTCRGLE FAW KM GLLLSMGGTVLVG+ADR+ G +++ GD +CLFAA+MYGVYTTALRVLVPDD SVSFQLLFGY+GLL L XX T PS+F G+++SVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAF SDAA+GK GG +E++GA+AVAAGFGLVSW Sbjct: 162 VVVFPLFFIANFSYNLSLAHTSVTSNTIISTTSSLWTFLFSTCRGLERFAWVKMAGLLLSMGGTVLVGLADRNGEGTNSVAGDALCLFAAIMYGVYTTALRVLVPDDRSVSFQLLFGYVGLLSLXXXXXXXXXXXXTRALPSVFAGLSLSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFLSDAALGKAHGGLKEVLGAVAVAAGFGLVSW 386
BLAST of NO12G03310 vs. NCBI_GenBank
Match: GAX92770.1 (Hypothetical protein PINS_000662 [Pythium insidiosum]) HSP 1 Score: 186.0 bits (471), Expect = 1.500e-43 Identity = 108/232 (46.55%), Postives = 151/232 (65.09%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLV-----GVADRSEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVSWKEK 229 I+ PL+FIANF+YN SL TSVTS+TI+S+TS+++TFL S C E F W K+ G++L M G + G AD + D + GD++ LFAA MYGVYTTA+R L+PD+ SVS L FG++G++ + P +L + G+T ++ +VL GL DNVLSDYLWAR+++LTSPTVATVGLSLT+P A SD ++ G ++ +L V +GF L++ K Sbjct: 150 IISPLWFIANFTYNQSLNMTSVTSSTIVSSTSTVFTFLLSVCALREPFVWMKLIGVVLCMLGNITTIFKDSGAADDASSAQDHVFGDLVALFAAFMYGVYTTAIRRLIPDEESVSIALFFGFLGVINFVALFP--FVLTFHYAGIESLSGLTHEIILLLVLKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPFAILSDYMFHQMIPGVVTLLASLLVVSGFVLINVSTK 379
BLAST of NO12G03310 vs. NCBI_GenBank
Match: XP_024586632.1 (drug metabolite transporter superfamily [Plasmopara halstedii] >CEG50263.1 drug metabolite transporter superfamily [Plasmopara halstedii]) HSP 1 Score: 182.2 bits (461), Expect = 2.200e-42 Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVAD-RSEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLL---CLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSD 198 I+ PL+FIANF+YN SL TSV+S+TI+S+TS+++TFL S E F W K+ G+LL M G + D ++ G D + GD++ LFAA MYGVYTTA+R L+PDD SVS L FG+IG+L CLL P +LLL S+ G+++ +L I + GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D Sbjct: 149 IISPLWFIANFTYNESLNLTSVSSSTIVSSTSTIFTFLLSVVALQEPFVWMKLAGVLLCMAGNISTIFNDVGAQSGSDHVLGDLVALFAAFMYGVYTTAIRRLIPDDESVSISLFFGFIGILNMVCLL----PIVLLLHCSDIESL-SGLSIEILILIGIKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVAD 343
BLAST of NO12G03310 vs. NCBI_GenBank
Match: ETI56292.1 (hypothetical protein F443_01139 [Phytophthora parasitica P1569] >ETK96082.1 hypothetical protein L915_01078 [Phytophthora parasitica] >ETL49455.1 hypothetical protein L916_01062 [Phytophthora parasitica] >ETM02512.1 hypothetical protein L917_01033 [Phytophthora parasitica] >ETM55758.1 hypothetical protein L914_01072 [Phytophthora parasitica] >ETO85036.1 hypothetical protein F444_01147 [Phytophthora parasitica P1976] >ETP26094.1 hypothetical protein F441_01114 [Phytophthora parasitica CJ01A1] >KUG00629.1 Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora nicotianae]) HSP 1 Score: 179.9 bits (455), Expect = 1.100e-41 Identity = 107/226 (47.35%), Postives = 153/226 (67.70%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADRS-EGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSI--FDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 I+ PL+FIANF+YN SL TSV+S+TI+S+TS+++TFL S E F W K+ G++L M G + D +GG D + GD++ LFAA MYGVYTTA+R L+PD+ SVS L FG+IG++ ++ P ++LA H + SI G+++ +L I + GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D + ++ + V +GF L++ Sbjct: 167 IISPLWFIANFTYNESLNLTSVSSSTIVSSTSTVFTFLLSVVALKEPFVWMKLAGVILCMAGNISTIFNDEGVDGGTDHVFGDLVALFAAFMYGVYTTAIRRLIPDEESVSISLFFGFIGVINMVCLLP---IVLAFH-YSSIESLSGLSLEILVLIGIKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVADFWFHGMLPTNVTLLASTLVISGFVLIN 388
BLAST of NO12G03310 vs. NCBI_GenBank
Match: XP_008890800.1 (hypothetical protein PPTG_00971 [Phytophthora parasitica INRA-310] >ETN24762.1 hypothetical protein PPTG_00971 [Phytophthora parasitica INRA-310] >ETP54085.1 hypothetical protein F442_01087 [Phytophthora parasitica P10297]) HSP 1 Score: 179.9 bits (455), Expect = 1.100e-41 Identity = 107/226 (47.35%), Postives = 153/226 (67.70%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADRS-EGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSI--FDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 I+ PL+FIANF+YN SL TSV+S+TI+S+TS+++TFL S E F W K+ G++L M G + D +GG D + GD++ LFAA MYGVYTTA+R L+PD+ SVS L FG+IG++ ++ P ++LA H + SI G+++ +L I + GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D + ++ + V +GF L++ Sbjct: 167 IISPLWFIANFTYNESLNLTSVSSSTIVSSTSTVFTFLLSVVALKEPFVWMKLAGVILCMAGNISTIFNDEGVDGGTDHVFGDLVALFAAFMYGVYTTAIRRLIPDEESVSISLFFGFIGVINMVCLLP---IVLAFH-YSSIESLSGLSLEILVLIGIKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVADFWFHGMLPTNVTLLASTLVISGFVLIN 388
BLAST of NO12G03310 vs. NCBI_GenBank
Match: CCA14055.1 (Drug/Metabolite Transporter (DMT) Superfamily putative [Albugo laibachii Nc14]) HSP 1 Score: 179.5 bits (454), Expect = 1.400e-41 Identity = 109/251 (43.43%), Postives = 150/251 (59.76%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADRSEG------GDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVSWKEKGQVEQQDDQEEGRKALGG 247 IV PL+F+ANF+YN SL TSVTS+TIIS+TS+++T S E F W KM G++L M G + D E + GD + LFAA MYGVYTTA+R LVPD++ S L FG++G L L+ P ++L + G+T + + + GL DNVLSDYLWA+S+++TSPTVATVGLSLT+PLA SD + GW+ I+ +L + GF L++ K + Q Q+ +L G Sbjct: 107 IVAPLWFLANFTYNASLDMTSVTSSTIISSTSTVFTLFLSVLVLQERFTWMKMTGVVLCMMGNMCTIFKDSMEADMKIIFSSQSALGDFVALFAAFMYGVYTTAIRKLVPDEAEFSLSLFFGFLGALTFLVLSPVVVIL--HYNGIESLHGLTWEIFQLMCVKGLFDNVLSDYLWAQSVIMTSPTVATVGLSLTVPLAIVSDLLFHNILPGWKTILASLLMVTGFVLINVSSKRDRKGQGFQKLNESSLSG 355
BLAST of NO12G03310 vs. NCBI_GenBank
Match: XP_009523773.1 (hypothetical protein PHYSODRAFT_329090 [Phytophthora sojae] >EGZ21056.1 hypothetical protein PHYSODRAFT_329090 [Phytophthora sojae]) HSP 1 Score: 179.5 bits (454), Expect = 1.400e-41 Identity = 104/224 (46.43%), Postives = 151/224 (67.41%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADR-SEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 I+ PL+FIANF+YN+SL TSV+S+TI+S+TS+++TFL S E F W K+ G++L M G + D ++GG D + GD++ LFAA MYGVYTT++R L+PDD SVS L FG+IG++ ++ P +L +T G+++ +L I + GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D + ++ + V +GF L++ Sbjct: 165 IISPLWFIANFTYNMSLNLTSVSSSTIVSSTSTVFTFLLSVVALKEPFVWLKLAGVILCMAGNISTIFNDEGADGGADHVLGDLVALFAAFMYGVYTTSIRRLIPDDESVSISLFFGFIGVINMVCLLP--FVLAFHYTGVESLSGLSLEILLLIGVKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVADFWFHGMLPTNVTLLASALVISGFVLIN 386
BLAST of NO12G03310 vs. NCBI_GenBank
Match: POM58339.1 (Drug/Metabolite transporter (DMT) Superfamily [Phytophthora palmivora var. palmivora]) HSP 1 Score: 178.7 bits (452), Expect = 2.400e-41 Identity = 102/224 (45.54%), Postives = 152/224 (67.86%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADR-SEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 I+ PL+FIANF+YN SL TSV+S+TI+S+TS+++TFL S E F W K+ G++L M G + D ++GG D + GD++ LFAA MYGVYTTA+R L+PD+ SVS L FG+IG++ ++ P ++++ ++ G+++ +L I + GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D + ++ + V +GF L++ Sbjct: 156 IISPLWFIANFTYNESLNLTSVSSSTIVSSTSTVFTFLLSVVALKEPFVWMKVAGVILCMAGNISTIFNDEGADGGTDHVFGDLVALFAAFMYGVYTTAIRRLIPDEESVSISLFFGFIGVINMVCLLP--IVVIFHYSSIESLSGLSLEILFLIGVKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVADFWFHSMLPTNVTLLASALVISGFVLIN 377
BLAST of NO12G03310 vs. NCBI_GenBank
Match: XP_002908416.1 (Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora infestans T30-4] >EEY61499.1 Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 177.9 bits (450), Expect = 4.100e-41 Identity = 103/224 (45.98%), Postives = 149/224 (66.52%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADR-SEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 I+ PL+F+ANF+YN SL TSV+S+TI+S+TS+++TFL S E F W K+ G++L M G + D ++GG D + GD++ LFAA MYGVYTT +R L+PD+ SVS L FG+IG + ++ P ++L ++ G+++ +L I L GL DNVLSDYLWAR+++LTSPTVATVGLSLT+PLA +D +R + + V +GF L++ Sbjct: 167 IISPLWFLANFTYNESLNLTSVSSSTIVSSTSTVFTFLLSVVALKEPFVWMKLAGVILCMAGNISTIFNDEGADGGTDHVFGDLVALFAAFMYGVYTTTIRRLIPDEESVSISLFFGFIGAINMVCLLP--IVLAFHYSGIESLSGLSLEILVLIGLKGLFDNVLSDYLWARAVLLTSPTVATVGLSLTVPLAIVADFWFHGMRPTNVTLFASALVISGFVLIN 388
BLAST of NO12G03310 vs. NCBI_GenBank
Match: XP_009832247.1 (hypothetical protein H257_08157 [Aphanomyces astaci] >ETV77910.1 hypothetical protein H257_08157 [Aphanomyces astaci]) HSP 1 Score: 176.8 bits (447), Expect = 9.200e-41 Identity = 103/223 (46.19%), Postives = 141/223 (63.23%), Query Frame = 0 Query: 2 IVFPLFFIANFSYNVSLAHTSVTSNTIISTTSSLWTFLFSTCRGLEAFAWTKMGGLLLSMGGTVLVGVADRSEGGDDTLGGDVICLFAAVMYGVYTTALRVLVPDDSSVSFQLLFGYIGLLCLLLXXPPTLLLLATHTFPSIFDGMTVSVLGFIVLNGLADNVLSDYLWARSIVLTSPTVATVGLSLTIPLAFFSDAAMGKLRGGWEEIVGALAVAAGFGLVS 225 +V PL+FIAN +YN SL TSVTS+TIIS+TSS++TF S E+FAW K+ G++ M G ++ + D S G D+ GD I L +A MY VYT+ +R +PDDSS+S L FG +GLL + P L L T+ +TV +LG + + GL DNVLSDYLWA +++ T+PTVAT+GLSLT+P A FSD + I ++ V AGF L++ Sbjct: 108 VVAPLWFIANCAYNFSLNMTSVTSSTIISSTSSMFTFALSVFFLGESFAWFKIAGVVFCMAGNIVTVLQDGSSGTSDSFTGDSIALVSAFMYAVYTSTMRKYIPDDSSMSLSLFFGLLGLLNFVCLLPVVLFLHFTNV--ESLQSLTVEILGLLTVKGLFDNVLSDYLWALAMLYTTPTVATIGLSLTVPFAIFSDLIFHAVSPSVVVIFASIFVIAGFVLIN 328 The following BLAST results are available for this feature:
BLAST of NO12G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03310 ID=NO12G03310|Name=NO12G03310|organism=Nannochloropsis oceanica|type=gene|length=816bpback to top protein sequence of NO12G03310.1 >NO12G03310.1-protein ID=NO12G03310.1-protein|Name=NO12G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bpback to top Synonyms
Publications
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