NO12G03280, NO12G03280 (gene) Nannochloropsis oceanica

Overview
NameNO12G03280
Unique NameNO12G03280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length405
Alignment locationchr12:906416..906820 -

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Properties
Property NameValue
DescriptionAldehyde dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:906416..906820 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR016161Ald_DH/histidinol_DH
IPR015590Aldehyde_DH_dom
Homology
BLAST of NO12G03280 vs. NCBI_GenBank
Match: EWM25716.1 (aldehyde dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 230.7 bits (587), Expect = 2.700e-57
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0
Query:    1 MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEFGG---NGTGEGKTMD 135
            +PA+A +LEEEAF+PVMYVVKI  L+EG++MNN V+QGLSSALFTSSP+S+FEWTGP GSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQY RRSTCTINHSKELPLAQGI FGG   NG GEGK MD
Sbjct:  444 VPATAKILEEEAFVPVMYVVKIKDLQEGVKMNNSVRQGLSSALFTSSPTSMFEWTGPTGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYTRRSTCTINHSKELPLAQGINFGGANENG-GEGKIMD 579          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: XP_022656668.1 (putative aldehyde dehydrogenase family 7 member A1 homolog [Varroa destructor] >XP_022700609.1 putative aldehyde dehydrogenase family 7 member A1 homolog [Varroa jacobsoni])

HSP 1 Score: 186.0 bits (471), Expect = 7.500e-44
Identity = 87/117 (74.36%), Postives = 103/117 (88.03%), Query Frame = 0
Query:    7 VLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEFG 124
            V+++E F P++Y++K +SL+E IR NNEVKQGLSS+LFT     VF+W GP GSDCGIVNVNI T+GAEIGGAFGGNK TGWGRESGSD+WKQYMRRSTCTIN++KELPLAQGI+FG
Sbjct:  436 VVQKETFAPIVYILKCSSLDEAIRWNNEVKQGLSSSLFTQDIEKVFKWIGPKGSDCGIVNVNIPTNGAEIGGAFGGNKSTGWGRESGSDSWKQYMRRSTCTINYTKELPLAQGIQFG 552          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: XP_009823068.1 (hypothetical protein H257_01511 [Aphanomyces astaci] >ETV88205.1 hypothetical protein H257_01511 [Aphanomyces astaci])

HSP 1 Score: 183.0 bits (463), Expect = 6.300e-43
Identity = 86/119 (72.27%), Postives = 102/119 (85.71%), Query Frame = 0
Query:    5 ASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEFG 124
            A +++ E F P+ YV+K A L+E I  NN+V QGLSS+LFT++ +++F+WTGP GSDCGIVNVNIG SGAEIGGAFGG KETG GRESGSD+WKQYMRRSTCTINHSK+LPLAQGI FG
Sbjct:  409 APIVQTEIFAPITYVMKFADLDEAIEKNNDVPQGLSSSLFTNNQAAIFKWTGPAGSDCGIVNVNIGPSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINHSKDLPLAQGINFG 527          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: CCI45303.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 182.6 bits (462), Expect = 8.300e-43
Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
Query:    1 MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            +P  A ++++E F P++YV+   SLEE I+ NN V QGLSS+LFT++ +++F+WTGPGGSDCGIVNVNIG SGAEIGGAFGG K+TG GRESGSD WKQYMRRSTCTINHS +LPLAQGI+F
Sbjct:  407 IPHDAPIVQQEIFAPILYVMSFQSLEEAIQKNNAVPQGLSSSLFTANQAAIFKWTGPGGSDCGIVNVNIGPSGAEIGGAFGGEKDTGGGRESGSDVWKQYMRRSTCTINHSDDLPLAQGIDF 528          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: XP_008870274.1 (hypothetical protein H310_06847 [Aphanomyces invadans] >ETW01276.1 hypothetical protein H310_06847 [Aphanomyces invadans])

HSP 1 Score: 182.2 bits (461), Expect = 1.100e-42
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 0
Query:    5 ASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEFG 124
            A +++ E F P+ YV+K ++L+E I  NN+V QGLSS+LFT + +++F+WTGP GSDCGIVNVNIG SGAEIGGAFGG KETG GRESGSDAWKQYMRRSTCTINHSK LPLAQGI FG
Sbjct:  409 APIVQTEIFAPITYVMKFSNLDEAIEKNNDVPQGLSSSLFTQNQAAIFKWTGPAGSDCGIVNVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINHSKNLPLAQGINFG 527          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: XP_022094228.1 (alpha-aminoadipic semialdehyde dehydrogenase-like [Acanthaster planci])

HSP 1 Score: 181.4 bits (459), Expect = 1.800e-42
Identity = 88/122 (72.13%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            +P  A V++ E+F PV+YV+K +SLEE I  NNEVKQGLSS+LFT +P ++F W GP GSDCGIVNVNI TSGAEIGGAFGG K TG GRESGSDAWKQYMRRSTCTIN+  ELPLAQG++F
Sbjct:  419 LPHDAPVIQTESFAPVLYVLKTSSLEEAIGWNNEVKQGLSSSLFTKNPGNLFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYGDELPLAQGLKF 540          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: AAM81354.1 (aldehyde dehydrogenase [Steinernema feltiae])

HSP 1 Score: 180.6 bits (457), Expect = 3.100e-42
Identity = 86/118 (72.88%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    5 ASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            A V+  E F P++YV+K+ +L+EGI+ NNEVKQGLSS+LFT +  ++F+W GP GSDCGIVN+NI TSGAEIGGAFGG KETG GRESGSDAWKQYMRRSTCTIN+SK LPLAQGI+F
Sbjct:  396 AEVVLRETFAPILYVIKMKNLDEGIKFNNEVKQGLSSSLFTQNLENIFKWMGPKGSDCGIVNINIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYSKNLPLAQGIKF 513          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: EYC04573.1 (hypothetical protein Y032_0087g2089 [Ancylostoma ceylanicum])

HSP 1 Score: 180.6 bits (457), Expect = 3.100e-42
Identity = 87/122 (71.31%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            +P  A V+  E F P++YV+K+  L+E I+ NNEV QGLSS+LFT++  +VF+W GP GSDCGIVNVNI TSGAEIGGAFGG KETG GRESGSD+WKQYMRRSTCTIN SKELPLAQGI+F
Sbjct:  410 LPHDAPVIMRETFAPILYVIKVKDLDEAIKFNNEVSQGLSSSLFTNNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINFSKELPLAQGIKF 531          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: EYC04574.1 (hypothetical protein Y032_0087g2089 [Ancylostoma ceylanicum])

HSP 1 Score: 180.6 bits (457), Expect = 3.100e-42
Identity = 87/122 (71.31%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            +P  A V+  E F P++YV+K+  L+E I+ NNEV QGLSS+LFT++  +VF+W GP GSDCGIVNVNI TSGAEIGGAFGG KETG GRESGSD+WKQYMRRSTCTIN SKELPLAQGI+F
Sbjct:  408 LPHDAPVIMRETFAPILYVIKVKDLDEAIKFNNEVSQGLSSSLFTNNIQNVFKWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINFSKELPLAQGIKF 529          
BLAST of NO12G03280 vs. NCBI_GenBank
Match: XP_024577216.1 (mitotic spindle assembly checkpoint protein [Plasmopara halstedii] >CEG40847.1 mitotic spindle assembly checkpoint protein [Plasmopara halstedii])

HSP 1 Score: 180.6 bits (457), Expect = 3.100e-42
Identity = 84/118 (71.19%), Postives = 103/118 (87.29%), Query Frame = 0
Query:    5 ASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSSVFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQYMRRSTCTINHSKELPLAQGIEF 123
            A ++++E F P++Y +K  SL+E I++NN+V QGLSS+LFT   +++F+WTGP GSDCGIVN+NIG SGAEIGGAFGG KETG GRESGSDAWKQYMRRSTCTIN+SKELPLAQGI+F
Sbjct: 1145 AKIVQKEIFAPILYALKFKSLDEAIQLNNDVPQGLSSSLFTKDQAAIFKWTGPLGSDCGIVNINIGPSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINYSKELPLAQGIDF 1262          
The following BLAST results are available for this feature:
BLAST of NO12G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25716.12.700e-5783.94aldehyde dehydrogenase [Nannochloropsis gaditana][more]
XP_022656668.17.500e-4474.36putative aldehyde dehydrogenase family 7 member A1... [more]
XP_009823068.16.300e-4372.27hypothetical protein H257_01511 [Aphanomyces astac... [more]
CCI45303.18.300e-4369.67unnamed protein product [Albugo candida][more]
XP_008870274.11.100e-4272.27hypothetical protein H310_06847 [Aphanomyces invad... [more]
XP_022094228.11.800e-4272.13alpha-aminoadipic semialdehyde dehydrogenase-like ... [more]
AAM81354.13.100e-4272.88aldehyde dehydrogenase [Steinernema feltiae][more]
EYC04573.13.100e-4271.31hypothetical protein Y032_0087g2089 [Ancylostoma c... [more]
EYC04574.13.100e-4271.31hypothetical protein Y032_0087g2089 [Ancylostoma c... [more]
XP_024577216.13.100e-4271.19mitotic spindle assembly checkpoint protein [Plasm... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010285NSK010285Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03280.1NO12G03280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592757gene_5503Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100154g13gene4801Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03280.1NO12G03280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03280 ID=NO12G03280|Name=NO12G03280|organism=Nannochloropsis oceanica|type=gene|length=405bp
ATGCCGGCGTCGGCATCCGTGTTGGAGGAGGAGGCGTTCATCCCCGTGAT
GTATGTGGTGAAGATAGCGAGTTTGGAAGAGGGCATTCGGATGAACAACG
AAGTGAAGCAGGGCTTGTCCTCGGCCTTGTTCACTTCCTCGCCCTCGAGC
GTGTTCGAGTGGACGGGCCCGGGGGGGTCGGATTGTGGTATTGTGAATGT
GAACATAGGCACAAGTGGCGCGGAGATCGGGGGGGCGTTCGGGGGGAACA
AGGAGACGGGATGGGGGAGGGAGAGTGGGTCTGACGCCTGGAAGCAGTAC
ATGCGTCGGTCGACGTGCACGATTAATCACAGTAAGGAACTCCCCTTGGC
CCAGGGGATTGAGTTCGGGGGGAATGGAACAGGGGAGGGGAAGACCATGG
ACTGA
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protein sequence of NO12G03280.1

>NO12G03280.1-protein ID=NO12G03280.1-protein|Name=NO12G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=135bp
MPASASVLEEEAFIPVMYVVKIASLEEGIRMNNEVKQGLSSALFTSSPSS
VFEWTGPGGSDCGIVNVNIGTSGAEIGGAFGGNKETGWGRESGSDAWKQY
MRRSTCTINHSKELPLAQGIEFGGNGTGEGKTMD*
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Synonyms
Publications