NO12G03270, NO12G03270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03270 vs. NCBI_GenBank
Match: EWM25723.1 (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 2.700e-75 Identity = 149/207 (71.98%), Postives = 166/207 (80.19%), Query Frame = 0 Query: 15 RSTSSLLLRRSR------GIHSWRR-WLGTSSSPTGEQDLSGFELRQYGKDDPPRLTCKTCSHILYDNPKIIIGAVITYRDP-TGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWREQEEGGGGAG 214 RSTS LL R R +RR + +SS TGEQDLSGFELRQYGKDDPPRLTCKTCSHILYDNPKI+ GAV+T R P TG LFLLCRRAIPPR+G NLCAGYMEKGESL++AA REAREEAGA I++G ILG++DISHIGQVHIYFKATL + DIEPGYES DARLVRW++I W +LAFPTVSWALMAW +Q GG G Sbjct: 12 RSTSRLLGVRGRKSLPCPSYTRYRRPFAKYASSTTGEQDLSGFELRQYGKDDPPRLTCKTCSHILYDNPKIVTGAVVTSRCPQTGDSLFLLCRRAIPPRRGYFNLCAGYMEKGESLAEAAAREAREEAGAQIDIGQILGIFDISHIGQVHIYFKATLSNTDIEPGYESLDARLVRWDEIPWGDLAFPTVSWALMAWEKQAALGGEWG 218
BLAST of NO12G03270 vs. NCBI_GenBank
Match: OJU31924.1 (NUDIX hydrolase [Alphaproteobacteria bacterium 65-37]) HSP 1 Score: 164.1 bits (414), Expect = 5.000e-37 Identity = 85/161 (52.80%), Postives = 104/161 (64.60%), Query Frame = 0 Query: 50 FELRQYGKDDPPRLTCKTCSHILYDNPKIIIGAVITYRDP---TGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWREQEE 208 FE R D+ RL C C I Y NPKI+ GAV T+RDP GK LL +RAI PRKG L AGYME GE+ QAAQREAREEA A+IE+ +L +Y ++ IGQV I ++A L S D+ G ES+D LV W DI W++LAFPTV WAL + E + Sbjct: 20 FEKRIPEGDNRERLVCGRCEFIHYQNPKIVAGAVCTWRDPGDDGGKEKILLAKRAIEPRKGFWTLPAGYMELGETTEQAAQREAREEACATIEIDRLLAMYSVARIGQVQIMYRARLLSADVAAGPESEDVALVDWADIPWDQLAFPTVVWALAHFHESRD 180
BLAST of NO12G03270 vs. NCBI_GenBank
Match: OFX01535.1 (NUDIX hydrolase [Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14]) HSP 1 Score: 162.5 bits (410), Expect = 1.400e-36 Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 0 Query: 50 FELRQYGKDDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWAL 200 FE R D+ RL C C I Y NPKI+ GAV T+RD G LL +RAI PRKG L AGYME GE+ QAA REAREEA A+IE+ +L +Y ++ IGQV I ++A L + D+ PG ES++ LV W DI WE+LAFPTV WAL Sbjct: 9 FEPRIPDGDNRERLVCARCEFIHYQNPKIVAGAVCTWRDDKGADKILLAKRAIEPRKGFWTLPAGYMELGETTEQAAAREAREEACATIEIERLLAMYSVARIGQVQIMYRARLANADVAPGIESEEVALVDWADIPWEQLAFPTVVWAL 158
BLAST of NO12G03270 vs. NCBI_GenBank
Match: WP_028466147.1 (NUDIX domain-containing protein [Nisaea denitrificans]) HSP 1 Score: 159.1 bits (401), Expect = 1.600e-35 Identity = 77/147 (52.38%), Postives = 98/147 (66.67%), Query Frame = 0 Query: 58 DDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWRE 205 D+ RL C C I Y NPKI++GAV+T+ D FLLC+RAI PR G L AG+ME+GES A REA EEA A IE+G +LGVY+I I QV + ++A L SPD+ PG ES+D L W++I W+E+AFPTV WA +RE Sbjct: 20 DERERLVCTDCGFINYINPKIVVGAVVTWEDK-----FLLCKRAIEPRIGYWTLPAGFMEEGESTQDGAAREAWEEANARIEIGPLLGVYNIPRISQVQMIYRARLLSPDVSPGIESEDVGLFTWDEIPWDEIAFPTVHWAFAHYRE 161
BLAST of NO12G03270 vs. NCBI_GenBank
Match: WP_094454294.1 (NUDIX domain-containing protein [Niveispirillum lacus] >OYQ36568.1 NUDIX hydrolase [Niveispirillum lacus]) HSP 1 Score: 158.3 bits (399), Expect = 2.700e-35 Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 0 Query: 58 DDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWR 204 +D RL C CS+I Y+NPKI++GAV+T D G+ FLLCRRAIPPR+G L AGYME E+ Q A REA EEAGA I + ++L +Y+I I QV + ++ATL P + G ES + L W+DI W+ELAFP+V WAL WR Sbjct: 27 EDRERLVCPDCSYIAYENPKIVVGAVVT--DNLGR--FLLCRRAIPPRRGFWTLPAGYMELNETTEQGAAREAMEEAGAHIAIDALLAIYNIPRISQVQMIYRATLAGPTLAAGTESLEVALFDWKDIPWDELAFPSVVWALHEWR 168
BLAST of NO12G03270 vs. NCBI_GenBank
Match: WP_009540606.1 (NUDIX hydrolase [Caenispirillum salinarum] >EKV30539.1 FAD pyrophosphatase [Caenispirillum salinarum AK4]) HSP 1 Score: 157.9 bits (398), Expect = 3.600e-35 Identity = 76/144 (52.78%), Postives = 96/144 (66.67%), Query Frame = 0 Query: 58 DDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMA 202 D+ PR+ C C I Y+NPKII+GAV+T+ D +LL RRAI PRKG + AG+ME ES A RE EEA A +EVG++LGVY + HI QVH+ ++A + +PD GYESQ+ LV W DI W ELAFP+V WAL A Sbjct: 20 DERPRMVCDDCGFINYENPKIIVGAVVTWGDK-----YLLARRAIEPRKGFWTIPAGFMELNESAEAGAAREVMEEAQAEVEVGALLGVYSLHHINQVHLIYRAEMTTPDHGAGYESQEVALVDWADIPWSELAFPSVRWALEA 158
BLAST of NO12G03270 vs. NCBI_GenBank
Match: WP_073132804.1 (NUDIX domain-containing protein [Roseomonas rosea] >SHI89631.1 ADP-ribose pyrophosphatase YjhB, NUDIX family [Roseomonas rosea]) HSP 1 Score: 157.5 bits (397), Expect = 4.700e-35 Identity = 76/158 (48.10%), Postives = 99/158 (62.66%), Query Frame = 0 Query: 50 FELRQYGKDDPPRLTCKTCSHILYDNPKIIIGAVITY---RDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWRE 205 FE R+ DD RLTC+ C I Y+NPK+++G+V+ LLCRRAI PR+G L AGY+E E++ + A+REA EEA A IE +L VY I+ +GQV + F+A L P E G ES + R W+DI W+E+AFPTV WAL AWRE Sbjct: 5 FERRRQEGDDQDRLTCRDCGFIAYENPKVVVGSVVAVPGAXXXXXXXAVLLCRRAIEPRRGFWTLPAGYLEMHETVEEGARREAWEEARARIETEGVLAVYSIARLGQVQVMFRARLAEPGFEAGPESLEVRAFAWDDIPWDEIAFPTVHWALNAWRE 162
BLAST of NO12G03270 vs. NCBI_GenBank
Match: PPR72938.1 (hypothetical protein CFH05_01254 [Alphaproteobacteria bacterium MarineAlpha3_Bin4]) HSP 1 Score: 157.1 bits (396), Expect = 6.100e-35 Identity = 72/152 (47.37%), Postives = 104/152 (68.42%), Query Frame = 0 Query: 58 DDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWREQEEGG 210 DD RL C C +I Y+NPK+++GAV ++D FL+CRRAI PR+G + AGY+E GE+ + A+RE +EEAGA + + +LG+Y+I HI QV+++ +A + P+ PG ES+ LV+W DI W+ELAFP+V+WAL R +EGG Sbjct: 18 DDRIRLVCPDCGYISYENPKVVVGAVCVWQD-----RFLICRRAIEPRQGRWTIPAGYLELGETTADGARREVQEEAGAEVRIIGLLGLYEIPHINQVYVFHRAKMTGPEFAPGQESEAVELVQWADIPWDELAFPSVAWAL---RRYDEGG 161
BLAST of NO12G03270 vs. NCBI_GenBank
Match: WP_020699124.1 (NUDIX hydrolase [Reyranella massiliensis]) HSP 1 Score: 156.8 bits (395), Expect = 7.900e-35 Identity = 79/150 (52.67%), Postives = 100/150 (66.67%), Query Frame = 0 Query: 50 FELRQYGKDDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWAL 200 FE R D+ RL C C I Y NPKI+ GAV T+ D + + LL RRAI PR+G + AGYME GE+ QAAQREAREEA A+IE+ +L +Y ++ IGQV I ++A L S D+ PG ES++ LV W DI W++LAFPTV WAL Sbjct: 25 FEKRIPDGDNRERLVCGRCEFIHYQNPKIVAGAVCTWGDGANEKI-LLARRAIEPRRGFWTMPAGYMELGETTEQAAQREAREEACATIEIDRLLAMYSVARIGQVQIMYRARLVSADVAPGIESEEVALVDWADIPWDQLAFPTVVWAL 173
BLAST of NO12G03270 vs. NCBI_GenBank
Match: KPF86838.1 (NUDIX hydrolase [alpha proteobacterium AAP38]) HSP 1 Score: 156.8 bits (395), Expect = 7.900e-35 Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 0 Query: 58 DDPPRLTCKTCSHILYDNPKIIIGAVITYRDPTGKPLFLLCRRAIPPRKGLLNLCAGYMEKGESLSQAAQREAREEAGASIEVGSILGVYDISHIGQVHIYFKATLKSPDIEPGYESQDARLVRWEDIEWEELAFPTVSWALMAWREQ 206 +D RL C CS+I Y+NPKI++GAV+T D G+ FLLCRRAI PR+G L AGYME E+ Q A REA EEAGA I + ++L VY+I I QV + ++A L P I G ES + + W+DI W+ELAFP+V WAL WRE+ Sbjct: 27 EDRERLVCPDCSYIAYENPKIVVGAVVT--DDAGR--FLLCRRAIQPRRGFWTLPAGYMELNETTEQGAAREAMEEAGARIAIDALLAVYNIPRISQVQMIYRARLSDPAIAAGVESLEVGMFAWKDIPWDELAFPSVVWALHEWREK 170 The following BLAST results are available for this feature:
BLAST of NO12G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03270 ID=NO12G03270|Name=NO12G03270|organism=Nannochloropsis oceanica|type=gene|length=1197bpback to top protein sequence of NO12G03270.1 >NO12G03270.1-protein ID=NO12G03270.1-protein|Name=NO12G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=220bpback to top Synonyms
Publications
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