NO12G03250, NO12G03250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03250 vs. NCBI_GenBank
Match: XP_005852667.1 (hypothetical protein NGA_0697300 [Nannochloropsis gaditana CCMP526] >EKU23166.1 hypothetical protein NGA_0697300 [Nannochloropsis gaditana CCMP526] >EWM25734.1 resistance to phytophthora 1 protein [Nannochloropsis gaditana]) HSP 1 Score: 356.7 bits (914), Expect = 6.900e-95 Identity = 200/289 (69.20%), Postives = 217/289 (75.09%), Query Frame = 0 Query: 13 ILVSSLLLASTHAFLLPSPASSQAIGITSSIRRPVATRTAVTER-------EQQQERKGISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRNER--DTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGA-SYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVRK 292 +L L ST AF+ +P S I + + +AV ER EQ QER GISEDDPMVQRIR++V RETGV+LDQLLNPSKVVNLEF+LINLRNER T KALA LE QI+KKETQLATEKRLVMRGWLKNLFLGQSL AV LSGVV YDALPGF+HLPLP+RAFAFWSFWMFTIPSLRAR+PG EKKALDVAFLLTP+VSLGMPFLT+D+PTIWWANAVATG G EEDETLP PLKAALKALDWGSGRERGVRK Sbjct: 8 LLALCFLFISTFAFVPSTPVSFGFIDRMTPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVXXXXXXXXXXXXXXXXXXXXGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
BLAST of NO12G03250 vs. NCBI_GenBank
Match: CBN79668.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 197.6 bits (501), Expect = 5.400e-47 Identity = 122/292 (41.78%), Postives = 175/292 (59.93%), Query Frame = 0 Query: 20 LASTHAFLLP----SPASSQAIGITSSIRRPVAT---RTAVTERE-QQQERKG-----------ISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRN--ERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVR 291 L AF+ P + A S A+ ++S+ R + R+A R +QQE +G ++ D ++QR+ EV E+GVELDQL+NP+KV+NLE DL+ LR E + D +A +E++I KKE+ L EKR+ M+GWLK +F+GQ++ L G++ D +P F H+ + ++ FW W+FT+PSLRARKPG +EK ALD+AFL TP+VS MPF+TK+ I+WAN A YGY + GE G ++ P LK K+LD+GSG+ERGVR Sbjct: 39 LRGADAFVPPTGGFATARSSAVHVSSTSSRRGCSGVERSARPRRTGRQQEGQGDALMAQMTDEEMALDQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLRAALEDEPGTDREA---IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTVGKPDDGEGG-----ASKSQPKWLKFIFKSLDFGSGQERGVR 322
BLAST of NO12G03250 vs. NCBI_GenBank
Match: XP_005756405.1 (hypothetical protein EMIHUDRAFT_460287 [Emiliania huxleyi CCMP1516] >XP_005776349.1 hypothetical protein EMIHUDRAFT_450611 [Emiliania huxleyi CCMP1516] >EOD03976.1 hypothetical protein EMIHUDRAFT_460287 [Emiliania huxleyi CCMP1516] >EOD23920.1 hypothetical protein EMIHUDRAFT_450611 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 187.2 bits (474), Expect = 7.300e-44 Identity = 107/213 (50.23%), Postives = 139/213 (65.26%), Query Frame = 0 Query: 78 EVLRETGVELDQLLNPSKVVNLEFDLINLRNERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVR 291 EV TGV L+ LLNPSKVVNLE + I E D A L++++ K ET+LA EKR V RGWLKNLF+GQSL A+A+SG++VYDA+PG L L +RA FWS+W+F IPSLRAR+P EK+AL++AFL +P+++LGMPFLTK+ IW AN Y Y G +G+ E ++ P L+ LD+GSG+ERGVR Sbjct: 4 EVRALTGVALEDLLNPSKVVNLERERILTEAELGAAADGAERAELQEKLDKIETRLAAEKRTVFRGWLKNLFIGQSLLAIAISGLMVYDAIPGV-QLDLSLRALGFWSYWLFVIPSLRARRPRGWEKRALNLAFLGSPLLTLGMPFLTKEPSLIWCANLALLLGCYAY---------GLAAGDGDGEVDSFSGP----LRWLDFGSGQERGVR 202
BLAST of NO12G03250 vs. NCBI_GenBank
Match: GAX13130.1 (hypothetical protein FisN_17Hh059 [Fistulifera solaris]) HSP 1 Score: 156.0 bits (393), Expect = 1.800e-34 Identity = 100/258 (38.76%), Postives = 136/258 (52.71%), Query Frame = 0 Query: 65 ISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRNERDT--------TDDNKALAT---------------LEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALP--------GFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVRK 292 ++ DDP VQ I + R+ GV LD LLNP+KVVNLE DL NLR E T D+K L T L ++I KKE L E+R V RGWLKN+FL Q++ + LS V+ + G ++ + ++ + IPSLR+R+P EKKALD+AFL +P +SL P TKD IW AN V ++Y +AY+ + ++D P LK K+LD+GSGRERG R+ Sbjct: 72 LTSDDPFVQAIDAGIQRDVGVPLDALLNPAKVVNLERDLYNLRMELATLTGRADILVGDDKTLLTTAECDGGGGGEDAEALRQKITKKEKDLIIERRSVFRGWLKNIFLAQAILSFGLSYVMATNPASLFGGYGWYGVYNMDVSIQVLGYXXXXXXVIPSLRSRRPKGAEKKALDIAFLASPAISLLAPVATKDTGLIWAANFVVVASAYAFAYLVDS--------DDSDDDSNTPEWLKFVYKSLDFGSGRERGARQ 321
BLAST of NO12G03250 vs. NCBI_GenBank
Match: XP_005716655.1 (unnamed protein product [Chondrus crispus] >CDF36836.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 153.3 bits (386), Expect = 1.200e-33 Identity = 102/263 (38.78%), Postives = 146/263 (55.51%), Query Frame = 0 Query: 28 LPSPASSQAIGITSSIRRPVATRTAVTEREQQQERKGISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDL-INLRNERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARK-PGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDE---TLPAPLKAALKALDWGSGR 286 L PA ++AI + R + A +E E + + I+E DPM +R+RDE L G+ LD+LLN KVVNL L + ++++ K E+ L EKR VM+ WLK LFL Q++ + + GV+ D +PG D +PL RA FW+ W+FTIP+LRARK +TEK AL+VAFL TP++++ +P LTK+ IW A+ GA Y + + + G +G+EE +K LK LDWGS R Sbjct: 37 LSRPALARAIRRKNVSRCRTLPQMAASETETEGKSDTITE-DPMTRRVRDE-LAADGINLDELLNAGKVVNLTRKLEMXXXXXXXXXXXXXXXQDAKQKMSKLESDLVREKRQVMQNWLKQLFLLQAIVFIGIGGVLANDVVPGVDSVPLVGRALGFWTTWLFTIPALRARKGTSKTEKSALNVAFLATPLLNVALPALTKNCGIIWAADVALLGACYAFYGI-----TAKRGADGDEEGNRPVKEQGKVKGILKYLDWGSWR 292
BLAST of NO12G03250 vs. NCBI_GenBank
Match: EJK67440.1 (hypothetical protein THAOC_11524 [Thalassiosira oceanica]) HSP 1 Score: 149.1 bits (375), Expect = 2.200e-32 Identity = 98/255 (38.43%), Postives = 139/255 (54.51%), Query Frame = 0 Query: 65 ISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRNE-------------------RDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYD---ALPGFD------HLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVRK 292 ++ +DP V++I V E GV LD+LLNP+KVVNLE DL NLR + D + + ++I+KKE L TE+R V RGWLK++FLGQ+ ++ALS V+ + GF ++ ++ F +PSLR+R+P EKKALD+AFL TP++SL P TKD IW AN + +YG+ ++ EEG +D+ P L+ K+LD+GSGRERG RK Sbjct: 122 MTSEDPFVKQIDASVRGEMGVGLDELLNPAKVVNLERDLYNLRMDLAQLTGVQVQQDAELTTVLADGGXXXEEADAVRQKIEKKERDLNTERRSVFRGWLKSVFLGQAAISMALSYVMATNPSALFGGFGWFNNVANMDTSIQVLGFXXXXXXXVPSLRSRRPSGKEKKALDIAFLGTPLISLLSPVATKDTGLIWMANFLVVAGAYGFTFLVD----DEEG----GDDKKDPQWLRFVYKSLDFGSGRERGARK 368
BLAST of NO12G03250 vs. NCBI_GenBank
Match: GAX20107.1 (hypothetical protein FisN_17Lh059 [Fistulifera solaris]) HSP 1 Score: 148.7 bits (374), Expect = 2.900e-32 Identity = 95/259 (36.68%), Postives = 131/259 (50.58%), Query Frame = 0 Query: 65 ISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRNERDTTDDNKAL------------------------ATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALP--------GFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVRK 292 ++ DDP VQ I + R+ GV LD LLNP+KVVNLE DL NLR E T + ++I KKE L E+R V RGWLKN+FL Q++ + LS V+ + G ++ + ++ + IPSLR+R+P EKKALD+AFL +P +SL P TKD IW AN V ++Y +AY+ + ++D P LK K+LD+GSGRERG R+ Sbjct: 73 LTSDDPFVQAIDAGIQRDVGVPLDALLNPAKVVNLERDLYNLRMELATLTGRADIXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKIAKKEKDLIIERRSVFRGWLKNIFLAQAILSFGLSYVMATNPASLFGGYGWYGVYNMDVSIQVLGYXXXXXXVIPSLRSRRPKGAEKKALDIAFLASPAISLLAPVATKDTGLIWTANFVVVASAYAFAYLVDS--------DDSDDDSNTPEWLKFVYKSLDFGSGRERGARQ 323
BLAST of NO12G03250 vs. NCBI_GenBank
Match: XP_005538274.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM82238.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 144.4 bits (363), Expect = 5.400e-31 Identity = 97/251 (38.65%), Postives = 134/251 (53.39%), Query Frame = 0 Query: 43 IRRPVATRTAVTEREQQQERKGISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRN---ERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEG-EEEDE----TLPAPLKAALKALDWGSGR 286 +R P+ T TE ++ DP+ R+R E L G+EL+QLLNPSKVVNLE L + E ++ + L + K + +L EKR VMR WLKNLF+ Q + AL G + +D+ LPL V+A FW W+FTIPSLRARKP EK AL+V+FL+ P+++L +P KD +W A + Y Y V+ V + ++ED+ L L A L+ LDWGS R Sbjct: 42 LRTPLHCSTETTE----PTKRATGVADPVEARVRKE-LESAGIELEQLLNPSKVVNLERKLAEYQTRLAELTSSGNAAERDRLLSKFSKMQRELEQEKRAVMRQWLKNLFVAQGILTAALGGWMAFDS-----RLPLYVQALGFWMVWLFTIPSLRARKPSSAEKNALNVSFLIAPVMNLVLPVFLKDTGELWLAQILQLIGCYLYYGVWTPSSVKDARKTAVQQEDQGGTKRLNVRLPAILRWLDWGSWR 282
BLAST of NO12G03250 vs. NCBI_GenBank
Match: CEM20875.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 137.1 bits (344), Expect = 8.600e-29 Identity = 101/306 (33.01%), Postives = 156/306 (50.98%), Query Frame = 0 Query: 10 AALILVSSLLLASTHAFLLPSPASSQAIGITSS-----------------IRRPVATRTAVTEREQQQERKGISEDDP-MVQRIRDEVLRETGVELDQLLNPSKVVNLEFDL-------INLRNERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGRERGVR 291 A ++ V + L AS+ A+ P P +S + SS RP+ + + + +Q Q+ + DP +V+R+ E+ +++DQL+NP KV+ LE +L EK L +RGWLK +FLGQS A A+S ++VY+ +PG + L ++ FW++W+F IPSLRARKP + EK+ALD AFL + +L P TK+ TI+W NA G SY +Y + ++G + ++E++ P L A KALD+GSG+ERG+R Sbjct: 28 AGVLGVVTSLKASSLAWRRPPPTTSSLGFVGSSWASVRSADHLAHKTPYRSARPLFSGPSSPDVKQPQQPQASDTVDPRIVERVNAELGARFNIDVDQLMNPLKVLGLEQELETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTLYVRGWLKAVFLGQSALAAAISAMLVYNNVPGVGEVDLSLQVLGFWNWWLFIIPSLRARKPAKKEKRALDWAFLAVLVTTLAAPSFTKEPSTIYWINAAVLGISYAISYSAPFP-LFDQG-DAQQEEQEGPEWLSWAFKALDFGSGQERGLR 331
BLAST of NO12G03250 vs. NCBI_GenBank
Match: XP_005703186.1 (hypothetical protein Gasu_56750 [Galdieria sulphuraria] >EME26666.1 hypothetical protein Gasu_56750 [Galdieria sulphuraria]) HSP 1 Score: 122.9 bits (307), Expect = 1.700e-24 Identity = 72/225 (32.00%), Postives = 123/225 (54.67%), Query Frame = 0 Query: 61 ERKGISEDDPMVQRIRDEVLRETGVELDQLLNPSKVVNLEFDLINLRNERDTTDDNKALATLEKQIQKKETQLATEKRLVMRGWLKNLFLGQSLGAVALSGVVVYDALPGFDHLPLPVRAFAFWSFWMFTIPSLRARKPGQTEKKALDVAFLLTPIVSLGMPFLTKDMPTIWWANAVATGASYGYAYVFQGKGVGEEGMEGEEEDETLPAPLKAALKALDWGSGR 286 ER+ I++ + E ++ ++LLNP+K+ +L+ L + + T D ++ +++K E + EKR VM L++LF+ Q++ ++++ G++ + P +PL RA FW W+FTIPSLRARKP EK AL+VAFL P+ ++ +PF+ KD +W+ N + YGY Y F + +E + + + ++ L+ LDWGS R Sbjct: 6 ERRNITKQCKSCLEMNKE---QSTASTEELLNPAKLASLQRQYKELLEQFEQTLDKHNRKEMQLRLEKLERNIELEKRSVMTSGLRSLFVVQAIVSLSVGGLLAANKFPFVQEVPLVFRALGFWMVWLFTIPSLRARKPNMAEKNALNVAFLACPVANVVIPFVNKDTFLLWFVNVSVVLSLYGY-YFF----LSDEAVRAQSQ-----LKIRGILRYLDWGSWR 217 The following BLAST results are available for this feature:
BLAST of NO12G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03250 ID=NO12G03250|Name=NO12G03250|organism=Nannochloropsis oceanica|type=gene|length=876bpback to top protein sequence of NO12G03250.1 >NO12G03250.1-protein ID=NO12G03250.1-protein|Name=NO12G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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