NO12G03210, NO12G03210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03210 vs. NCBI_GenBank
Match: ACD54788.1 (vcbs-like protein [Philodina roseola]) HSP 1 Score: 146.7 bits (369), Expect = 2.400e-31 Identity = 101/344 (29.36%), Postives = 148/344 (43.02%), Query Frame = 0 Query: 299 VGPSNVEIGDLNGDCIKDLVVSASGSDVIVIFLGCGDGTFFPGVRYPVGPPGSFPYRVRLADVNHDGRLDIITANLGGAALSILLGRGDGTFTNGFVFPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALGRN-LAVLTSLGDGTFRRPVLHELGKHNRPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSVSPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILLN 642 +GPS+V + D N D D+ + + SD I LG GDG F + Y V PGS+P + ++D+N+DG DII AN G + + + LG G+GTF + F TG + G + + + G+G F PV + + P + + N D DI V+ S NS++VL G G+GSF ++S G P + V DFN D I DI AN+LSN + +L G GDGTF + + G G P +LA+G N+D + DIVV + N + + L+ Sbjct: 915 LGPSSVVVDDFNNDSYLDIAATFATSDNFGILLGQGDGLFADMIVYAV-KPGSYPNNLVVSDINNDGNKDIIIANFGTSDIGLFLGYGNGTFASMTTFSTGNASKPRFVTVGDFNNDHRIDIVVVDSGRYSIIVYLGYGNGSFVHTMTYSIGSSSNPYAAAISDFNNDSRLDIAVANAGSSEVIIFLGYGNGIFASPVAYSASYASDPSCITIADLNGDNRSDIA-VSTFSGNSIAVLFGYGNGSFAAAVTYSTGDGTVPTYVHVDDFNNDTILDIAVANSLSNSIVVLFGFGDGTFLSGKPYST-GEG-SSPVSLAIGDFNRDTRLDIVVANSQSNTIGVFLD 1254
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_068334046.1 (VCBS repeat-containing protein [Hymenobacter sp. PAMC 26554] >AMR26210.1 hypothetical protein A0257_03285 [Hymenobacter sp. PAMC 26554]) HSP 1 Score: 122.1 bits (305), Expect = 6.400e-24 Identity = 94/356 (26.40%), Postives = 143/356 (40.17%), Query Frame = 0 Query: 288 FIPPLSFPA-EGVGPSNVEIGDLNGDCIKDLVVSASGSDVIVIFLGCGDGTFFPGVRYPVGPPGSFPYRVRLADVNHDGRLDIITANLGGAALSILLGRGDGTFTNGFVFPTG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALGRNLAVLTSLGDGTFRRPVLHELGKHNRPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSVSPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILLN 642 F P +++ A PS++ + D+NGD D + + S + + LG G G+F Y G GSFP V +ADVN DG+ D++TAN +++LLG G G+F N + TG + L + VL G G+F ++ G ++ P S+ V N D PD++ N SD ++ VLLG G GSF ++S P ++AV D NGD D++ A+ + +L G G G+F + P +AV +N D K DI + N V +LL+ Sbjct: 39 FAPVVNYDAGTNSAPSSIVVADVNGDGKPDFLTANYYSSTVCVQLGTGTGSFSSMAVYSTG-AGSFPCSVAVADVNGDGKPDVLTANSETNTVAVLLGTGTGSFGNRITYSTGANSSPNSIVAADVNGDGQPDLLTANLYSSTVGVLLSTGAGSFGAVTTYSTGALSYPLSIAVADVNGDGQLDLLTANTLLNAVGVLLGTGTGSFGAVAAYDAGPNSGPFSIVVADVNGDGRPDLLTANHASD-TVGVLLGTGTGSFGAVTTYSTGANTQPYSIAVADVNGDGKLDVLMASGGNPTAGVLLGTGTGSFGAALAYSAGPASY--PHGIAVADVNGDGKPDIFTANSGSNTVGVLLS 390
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_091838150.1 (HYR domain-containing protein [Marininema halotolerans] >SFS89775.1 HYR domain-containing protein [Marininema halotolerans]) HSP 1 Score: 108.2 bits (269), Expect = 9.600e-20 Identity = 115/303 (37.95%), Postives = 148/303 (48.84%), Query Frame = 0 Query: 286 FRFIPPLSFPAEGVGPSNVEIGDLNGDCIKDLVVSASGSDVIVIFLGCGDGTFFPGVRYPVGPPGSFPYRVRLADVNHDGRLDIITANLGGAALSILLGRGDGTFTN--GFVFPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALGRNLAVLTSLGDGTFRRPVLHELGKHNRPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSVSPGLAPMALAVGDFNGDLIPDIVTANALSNDVTIL 587 F P + G P + D + D DL + +G D + IFLG GDGTF P P G+ P + D N+D DI N G +S+ LG G GTF + G F TG XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX NL +L G G F + P + + + NCD PDI +N ++NS+S L+G GDG+F+TP +F+V G P+ L GDFN D + D+ +AN ++ T+L Sbjct: 56 FTAAPGSPIGSGGTTPQGIVSADFDNDGFIDLALVNNGPDTVAIFLGNGDGTFTPAPGSPFPSGGTNPVGIVAGDFNNDSITDIAITNNGNNTISVFLGNGGGTFISAAGSPFLTG-GVNPLGIITADFNNDGNLDLANANVNDVITLFLGXXXXXXXXXXASPIVXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNLTILLGDGTGGFTNAPGSPIAIGGSPREVVITHVNCDDVPDIA-INQLANNSISALIGNGDGTFQTPSTFTVGGG--PVGLVTGDFNNDGVLDLSSANINGSNFTVL 354
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_069070173.1 (DUF4347 domain-containing protein [Nostoc sp. KVJ20] >ODG97691.1 hypothetical protein A4S05_12625 [Nostoc sp. KVJ20]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 63/143 (44.06%), Postives = 89/143 (62.24%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILLNTCT 645 RP S+ VG F+ D D+V N S S+SVLLG G+G+F++ +FSV GL+P ++AV DFN D D+VTAN LSN++++L G GDG+F F ++ P ++AVG NKD K DIV V+ + +S+LL T Sbjct: 374 RPYSIVVGDFDKDGNTDLVTAN-KSSQSVSVLLGNGNGTFKSASNFSVVGFNGLSPSSVAVADFNKDGKLDLVTANNLSNNISVLLGKGDGSFQNAVNFALESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLLGNGT 513
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099072879.1 (hypothetical protein, partial [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 497 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 632
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099073265.1 (DUF4347 domain-containing protein, partial [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 670 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 805
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099073549.1 (DUF4347 domain-containing protein, partial [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 670 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 805
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099076533.1 (DUF4347 domain-containing protein, partial [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 670 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 805
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099076620.1 (DUF4347 domain-containing protein [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 670 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 805
BLAST of NO12G03210 vs. NCBI_GenBank
Match: WP_099076710.1 (DUF4347 domain-containing protein, partial [Nostoc linckia]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 504 RPVSLAVGYFNCDLFPDIVLVNGGSDNSLSVLLGRGDGSFRTPRSFSV--SPGLAPMALAVGDFNGDLIPDIVTANALSNDVTILRGHGDGTFSRVRTFPVDGVGIPGPAALAVGLLNKDIKHDIVVVHFSGNLVSILL 641 RP S+ VG F+ D D+V N S ++SVLLG+GDG+F +FS GL+P ++AV DFN D D+VTAN++SN++++L G GDG+F FP++ P ++AVG NKD K DIV V+ + +S+LL Sbjct: 670 RPYSIVVGDFDKDGKTDLVTAN-KSSQTVSVLLGKGDGTFNPASNFSTVGFNGLSPSSVAVADFNKDGKLDLVTANSISNNISLLLGKGDGSFQTAVNFPLESAS--APISIAVGDFNKDGKSDIVTVNNASQNISVLL 805 The following BLAST results are available for this feature:
BLAST of NO12G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03210 ID=NO12G03210|Name=NO12G03210|organism=Nannochloropsis oceanica|type=gene|length=2287bpback to top protein sequence of NO12G03210.1 >NO12G03210.1-protein ID=NO12G03210.1-protein|Name=NO12G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=652bpback to top Synonyms
Publications
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