NO12G03170, NO12G03170 (gene) Nannochloropsis oceanica

Overview
NameNO12G03170
Unique NameNO12G03170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3577
Alignment locationchr12:873458..877034 +

Link to JBrowse

Properties
Property NameValue
DescriptionMethyltransferase type 11
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:873458..877034 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO12G03170 vs. NCBI_GenBank
Match: EWM25713.1 (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 591.3 bits (1523), Expect = 2.500e-165
Identity = 288/429 (67.13%), Postives = 327/429 (76.22%), Query Frame = 0
Query:    1 MAQRVVDAFNRFVDQKVVPRVQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHFDKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKPPAG 430
            MAQR+VDAFN FVD  +VP+VQPIVEKD++PD +IRLGIRSMLRDML +F +RGLEGTM AKQAY+DELK+LPIA+ T AAN QHYE+PT+ Y+L+LGP+MKYSCG WP ++TSF DSETEMLELYC+RAELEDGM +LDLGCGWGSVSL+VA KYPRSQ+++LSNSATQREYIE E +KRGLTN+TVWTADIN FE P                                                                      D FDRVISIEMFEH KNYQ+L AKV+ WLRPGGKLFVH+FTHATT YHF+KSWMAENFFTGGQMPSQDL LYFQ DLKIEAQWV+NGKHYS+TNAAWL+NLD++KTEAK LLA I+G EKATKAFVDWRLFFLTLVECFA+DDGNQW+V+LYRFVKP  G
Sbjct:    1 MAQRMVDAFNHFVDLHIVPKVQPIVEKDLVPDSVIRLGIRSMLRDMLCDFKNRGLEGTMTAKQAYVDELKTLPIAVSTGAANEQHYEIPTALYRLMLGPWMKYSCGYWPKADTSFVDSETEMLELYCRRAELEDGMTVLDLGCGWGSVSLYVAGKYPRSQVYALSNSATQREYIEEECKKRGLTNLTVWTADINDFEGPEAMAGNGGEDKSRTAGNFSSKSPGIEGYAMEAGVMPTPSVEGGDGGSGDTRR-----------------GDAFDRVISIEMFEHCKNYQRLFAKVAGWLRPGGKLFVHVFTHATTPYHFEKSWMAENFFTGGQMPSQDLFLYFQDDLKIEAQWVLNGKHYSRTNAAWLSNLDRHKTEAKRLLADIYGPEKATKAFVDWRLFFLTLVECFAIDDGNQWAVSLYRFVKPLPG 412          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: OYW73461.1 (SAM-dependent methyltransferase [Verrucomicrobia bacterium 12-59-8])

HSP 1 Score: 367.9 bits (943), Expect = 4.500e-98
Identity = 187/410 (45.61%), Postives = 246/410 (60.00%), Query Frame = 0
Query:   21 VQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKP 427
            +  I+ K+++PD +IRLGIR  L + L E      E    A   Y+ +LK +P+AI T+ AN QHYEVPT FY+LVLG ++KYS G WP   T+F +SE  ML++ C+RAEL+DG +IL+LGCGWGS+SL++A+ YP +QI S+SNS TQ+ +I+ EA KRGL N+T+ TA++  FE                                                                       A +FDR +S+EMFEHMKNYQ+LL +VS+WL+P GKLFVHIFTH   AYH+    +  WMA+ FFTGGQMPS DLLLYFQ DLKIE  W V+G+HYSKT+ AWLAN+D +K E   L A  +G ++ TK +V WRLFFL   E +    G +W V+ YRF+KP
Sbjct:    4 INAILAKNILPDSMIRLGIRQRLAETLRENKQPTAEAQRAALMRYVQDLKQMPVAIATDEANQQHYEVPTRFYQLVLGKHLKYSSGYWPDERTTFDESEAAMLQMTCERAELQDGQRILELGCGWGSLSLWMAEHYPNAQITSVSNSRTQKLFIDAEAAKRGLKNLTIITANMIHFE--------------------------------------------------------------------GVGAGVFDRCVSVEMFEHMKNYQELLRRVSTWLKPRGKLFVHIFTHREYAYHYEVRSEDDWMAKYFFTGGQMPSDDLLLYFQDDLKIEDHWCVSGQHYSKTSEAWLANMDAHKAEILPLFAETYGKDQVTKWWVWWRLFFLACAELWGYRGGEEWIVSHYRFIKP 345          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_078814258.1 (class I SAM-dependent methyltransferase [Prosthecobacter debontii] >SKB00086.1 cyclopropane-fatty-acyl-phospholipid synthase [Prosthecobacter debontii])

HSP 1 Score: 360.9 bits (925), Expect = 5.500e-96
Identity = 180/407 (44.23%), Postives = 243/407 (59.71%), Query Frame = 0
Query:   24 IVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKP 427
            ++ KD++PD  IR GIR  L + L +     LE    A   +++ELK+ P+AI T+ AN QHYEVPT FY+L LGP++KYS G WP+  T+F++SE  ML L C+RAEL+DG  IL+LGCGWGS+SL++A  YP ++I S+SNS TQ+E+I+ EA KRGLTN+T+ TA++  F+                                                                         +FDR +S+EMFEHMKNYQ+L+ ++S+WL+PGGKLFVHIFTH   AYH+    +  WMA  FFTGGQMPS DLLLYFQ  LKI+  W V+G HYSKT+ AWLAN+D NK E   L A  +G+++A K +  WR+F++   E +   +G +W V+ YRF KP
Sbjct:    7 LLAKDLLPDAAIRFGIRQRLANTLRKHRQPNLEAQRAALLRHVNELKASPVAIATDEANQQHYEVPTRFYQLCLGPHLKYSSGYWPAPTTTFEESEAHMLRLTCERAELQDGQNILELGCGWGSLSLWMAAHYPNAKITSVSNSRTQKEFIDAEAAKRGLTNLTIVTANMIHFQ--------------------------------------------------------------------GVGDGVFDRCVSVEMFEHMKNYQELMRRISTWLKPGGKLFVHIFTHREYAYHYEVTGEDDWMARYFFTGGQMPSDDLLLYFQDHLKIDDHWCVSGIHYSKTSEAWLANMDANKAEIMPLFAETYGADQAVKWWAYWRIFYMACAELWGYHEGEEWLVSHYRFTKP 345          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: PHX95260.1 (SAM-dependent methyltransferase [Pedosphaera sp.])

HSP 1 Score: 352.4 bits (903), Expect = 2.000e-93
Identity = 183/410 (44.63%), Postives = 240/410 (58.54%), Query Frame = 0
Query:   21 VQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKP 427
            +  ++E++++PD L+R GIR +L   L E      E      QA I EL+  PIAI+T AAN QHYEVPT FY+L LGP +KYS  LWP+  T+  ++E  ML LY +RA+L DG  IL+LGCGWGS+SL++A+++P S+I  +SNS TQ+E+I+ EA +RGL N+ + T D+N FE                                                                     T A LFDRV+SIEMFEHMKNYQ+LLA V+ WLRPGG+LFVHIFTH   AYHF    +  WMA  FFTGG MPS DLL YFQ DL++   W VNG+HY +T  AWLAN+D N+ E + +LA+ +G+E  TK +V WR+FF+   E +    GN+W V+ Y F KP
Sbjct:    2 IDALLERNLLPDPLLRFGIRRLLAQRLREEDKGSAEAQRTHLQALIGELRRSPIAIETAAANEQHYEVPTRFYQLCLGPRLKYSGALWPAGVTTLAEAEERMLALYAERAQLADGQDILELGCGWGSLSLWMAERFPNSRITGVSNSRTQKEFIDGEAARRGLKNLHIITCDMNRFE------------------------------------------PVDEVEGLKGSKVEESPPSTLQPFNPSTPAALFDRVVSIEMFEHMKNYQRLLANVARWLRPGGQLFVHIFTHKEFAYHFVARDETDWMARYFFTGGIMPSDDLLAYFQDDLRLMNHWRVNGQHYEQTANAWLANMDANEPEIRKILAATYGTESETKWWVYWRVFFMACAELWGYRHGNEWLVSHYLFRKP 369          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_006982657.1 (class I SAM-dependent methyltransferase [Chthoniobacter flavus] >EDY17154.1 Methyltransferase type 11 [Chthoniobacter flavus Ellin428])

HSP 1 Score: 349.7 bits (896), Expect = 1.300e-92
Identity = 178/410 (43.41%), Postives = 243/410 (59.27%), Query Frame = 0
Query:   21 VQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHFD----KSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKP 427
            V  I+E +++PD LIRLGIR +LR+ L E  +   E      QA+ID L+  PIA+ T+AAN QHYEVPT FY+  LG  +KYS G WP    +  ++E +ML L C+RAEL DG +IL+LGCGWGS+SL++A+KYP+++I ++SNS TQ+E+I+ EA +RG  N+T+ TAD+N F+I                                                                      A+ FDRV+S+EMFEHMKNYQ LLA+V+ WL PGGKLFVHIFTH   AYH++      WM   FF+GGQMPS D LL+FQ D+++E +W V+G HY KT  AWL N+D ++TE   + A  +G E+ T+ +V WR+FF+   E +    G++W V+ YRF KP
Sbjct:    4 VDSILEANVVPDPLIRLGIRHLLRETLREKGAGSTEERQARLQAHIDGLRRSPIAVQTHAANEQHYEVPTHFYQYALGKRLKYSSGYWPVGVNTLDEAEEKMLALTCERAELADGQRILELGCGWGSLSLWMAEKYPQARITAVSNSRTQKEHIDAEAAQRGWPNLTIITADMNVFDI----------------------------------------------------------------------AETFDRVVSVEMFEHMKNYQLLLARVARWLAPGGKLFVHIFTHREIAYHYEDKGPSDWMTRYFFSGGQMPSHDTLLHFQDDVRLETRWTVSGAHYQKTAEAWLQNMDAHRTEILPIFAQTYGEEQTTRWWVYWRVFFMACAELWGYRGGDEWIVSHYRFRKP 343          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_002997800.1 (class I SAM-dependent methyltransferase [Leptospira weilii] >EMY78748.1 cyclopropane-fatty-acyl-phospholipid synthase [Leptospira weilii serovar Ranarum str. ICFT])

HSP 1 Score: 347.8 bits (891), Expect = 4.800e-92
Identity = 176/406 (43.35%), Postives = 241/406 (59.36%), Query Frame = 0
Query:   24 IVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVK 426
            ++EKD+ PD LIR+ IR +L+  L +     LE        Y++ LK  PIAI T+AAN QHYEVP+ F+KLV+G +MKYS G W + NTSF +SE  MLE+ C+RA++E+GM +LDLGCGWGS+SL++A+K+P+S I  +SNS +Q+++I+ EA+KRGL N+T+ TAD+N F I                                                                      A  FDR++S+EM EHMKNY+ L  K S +L+P G  FVHIFTH   AY F    D  WM++ FFTGGQMPS DL LYFQ+D +I+ QWVVNGKHY+KT+ AWL  + +NK E   +L++ +GSE+A K FV W++FF+   E +   +G +W V+ Y F K
Sbjct:    7 LMEKDIFPDFLIRIRIRQLLKKRLKDEDKGSLEKNQKHLMEYVNSLKKFPIAIHTSAANEQHYEVPSEFFKLVMGKHMKYSSGYWETKNTSFDESERRMLEITCERAQIENGMSVLDLGCGWGSLSLYMAEKFPKSSITGVSNSKSQKKFIDGEAKKRGLKNLTILTADMNEFRI----------------------------------------------------------------------AKKFDRLVSVEMLEHMKNYEILFEKFSGFLKPKGLFFVHIFTHHKFAYAFEVVDDTDWMSKYFFTGGQMPSHDLFLYFQKDFQIQNQWVVNGKHYAKTSEAWLEGMVRNKDEVMKILSATYGSEQAVKWFVYWKVFFMACAELWKYRNGEEWIVSHYLFSK 342          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_019109994.1 (class I SAM-dependent methyltransferase [Verrucomicrobia bacterium SCGC AAA164-O14])

HSP 1 Score: 345.5 bits (885), Expect = 2.400e-91
Identity = 174/407 (42.75%), Postives = 238/407 (58.48%), Query Frame = 0
Query:   21 VQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRF 424
            +  ++ KD++PD LIR+GIRS L++ L  F +   E        ++ ELK  P+AI T  AN QHYE+PT+F++ VLGP+MKYS G W + +T  + SE  ML+L C+RAELE+G +IL+LGCGWGS++L++AK+YP++QI ++SNS TQ+ YI+++A +RGLTNI V T ++  +E                                                                         +FDRV+S+EMFEHMKNY KLL+++SSWL+P GKLFVHIFTH   AYH+    +  WMA  FFTGGQMPS DLLLYFQ  L IE  W V+G+HY KT+ AWL  +D++  E K L+A  +G   A K +V WR FF+   E +    G +W V+ YRF
Sbjct:    4 IDDLLAKDIIPDALIRIGIRSRLKETLKPFKNLNCEDRQAVLMKHVAELKECPLAIATEEANEQHYELPTNFFQKVLGPHMKYSSGYWDAGSTDIETSEARMLKLSCERAELENGHRILELGCGWGSLTLWMAKEYPKAQITAISNSKTQKIYIDSQASERGLTNIEVKTVNMISYE--------------------------------------------------------------------GEGESIFDRVVSVEMFEHMKNYDKLLSRISSWLKPEGKLFVHIFTHREYAYHYEAKDESDWMARYFFTGGQMPSDDLLLYFQDKLSIENHWQVSGEHYQKTSEAWLTRMDESSDELKLLIAETYGEADAKKWWVWWRCFFMACAELWGFQKGQEWIVSHYRF 342          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_050044104.1 (class I SAM-dependent methyltransferase, partial [Verrucomicrobia bacterium SCGC AAA168-F10])

HSP 1 Score: 344.7 bits (883), Expect = 4.100e-91
Identity = 174/404 (43.07%), Postives = 237/404 (58.66%), Query Frame = 0
Query:   24 IVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF----DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRF 424
            ++ KD++PD LIR+GIRS L++ L  F +   E        ++ ELK  P+AI T  AN QHYE+PT+F++ VLGP+MKYS G W + +T  + SE  ML+L C+RAELE+G +IL+LGCGWGS++L++AK+YP++QI ++SNS TQ+ YI+++A +RGLTNI V T ++  +E                                                                         +FDRV+S+EMFEHMKNY KLL+++SSWL+P GKLFVHIFTH   AYH+    +  WMA  FFTGGQMPS DLLLYFQ  L IE  W V+G+HY KT+ AWL  +D++  E K L+A  +G   A K +V WR FF+   E +    G +W V+ YRF
Sbjct:    3 LLAKDIIPDALIRIGIRSRLKETLKPFKNLNCEDRQAVLMKHVAELKECPLAIATEEANEQHYELPTNFFQKVLGPHMKYSSGYWDAGSTDIETSEARMLKLSCERAELENGHRILELGCGWGSLTLWMAKEYPKAQITAISNSKTQKIYIDSQASERGLTNIEVKTVNMISYE--------------------------------------------------------------------GEGESIFDRVVSVEMFEHMKNYDKLLSRISSWLKPEGKLFVHIFTHREYAYHYEAKDESDWMARYFFTGGQMPSDDLLLYFQDKLSIENHWQVSGEHYQKTSEAWLTRMDESSDELKLLIAETYGEADAKKWWVWWRCFFMACAELWGFQKGQEWIVSHYRF 338          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: CBN77985.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 341.7 bits (875), Expect = 3.500e-90
Identity = 175/412 (42.48%), Postives = 236/412 (57.28%), Query Frame = 0
Query:   17 VVPRVQPIVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHF--DKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVKP 427
            V P V P VEK+++PD ++R G+R      L + +       +  K+A I+ELK +PIA   +AAN QHYEV  +FY L LGP +KYS G WP S+++F++SE  MLE+YC RA+LEDGMKI+DLGCGWGS++LF+A+KYP + I S+SNSA+Q+ YI+ + ++RG  N+ V T DIN F++                                                                     D   FDRV+SIEMFEHMKNY+ L+AK+S WL PGGKLFVHI  H    YHF  ++   A+ FF G +MP + LL +FQ+DL+IE  W VNG HY++T+ AWL+ +D+NK E   +L  I+G     K FV WRLFF+   E F    G +W V+ Y F KP
Sbjct:   12 VSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCRERGFGNVRVITGDINEFDL------------------------------------------------------------------GEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHILKHKDHPYHFFQEEGGRAQYFFWGERMPWEALLFHFQEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEIMPILGEIYGEGTELKWFVYWRLFFIACAELFNYRKGEEWMVSHYLFAKP 357          
BLAST of NO12G03170 vs. NCBI_GenBank
Match: WP_108056571.1 (class I SAM-dependent methyltransferase [Spartobacteria bacterium LR76] >PTY00419.1 SAM-dependent methyltransferase [Spartobacteria bacterium LR76])

HSP 1 Score: 341.7 bits (875), Expect = 3.500e-90
Identity = 178/406 (43.84%), Postives = 233/406 (57.39%), Query Frame = 0
Query:   24 IVEKDMMPDHLIRLGIRSMLRDMLAEFSSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTHATTAYHFD----KSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMDDGNQWSVNLYRFVK 426
            ++ +D++PD  IRLGIR +L   L E +   +E    A Q +I EL   PIAI T+ AN QHYEVPT+F++ VLGP MKYSCG WP  +T+F +SE  ML L C+RAEL DG  IL+LGCGWGS++L++A+KYP S+I  +SNS TQRE+IE EA +RGLTNI + TAD+N F                                                                       +   FDRV+S+EMFEHMKNY++LLA+V+SWLRPGGKLFVHIFTH   AYHF+      W+   FF GG MPS  LLLYFQ DLKI+  W V G HY +T+ AWL  +D +  + + +L   +G+E   +    WR+FF+   E +   DG++W V+ Y F K
Sbjct:    7 LLARDLLPDAAIRLGIRQLLARKLKEENLGDIEKQQEAIQRFIGELDRSPIAIKTSDANEQHYEVPTAFFRHVLGPRMKYSCGYWPREDTTFAESEEAMLALTCERAELSDGFDILELGCGWGSLTLWMAEKYPASRITGVSNSRTQREHIEAEAARRGLTNIRILTADMNDF---------------------------------------------------------------------AAEPSAFDRVVSVEMFEHMKNYRRLLARVASWLRPGGKLFVHIFTHKDYAYHFEGTDPSDWITRYFFAGGTMPSDHLLLYFQDDLKIDRHWRVCGTHYQRTSEAWLKEMDTHAADIRPILEDTYGAENFARWRAYWRVFFMACAELWGYRDGSEWIVSHYLFRK 343          
The following BLAST results are available for this feature:
BLAST of NO12G03170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25713.12.500e-16567.13methyltransferase type 11 [Nannochloropsis gaditan... [more]
OYW73461.14.500e-9845.61SAM-dependent methyltransferase [Verrucomicrobia b... [more]
WP_078814258.15.500e-9644.23class I SAM-dependent methyltransferase [Prostheco... [more]
PHX95260.12.000e-9344.63SAM-dependent methyltransferase [Pedosphaera sp.][more]
WP_006982657.11.300e-9243.41class I SAM-dependent methyltransferase [Chthoniob... [more]
WP_002997800.14.800e-9243.35class I SAM-dependent methyltransferase [Leptospir... [more]
WP_019109994.12.400e-9142.75class I SAM-dependent methyltransferase [Verrucomi... [more]
WP_050044104.14.100e-9143.07class I SAM-dependent methyltransferase, partial [... [more]
CBN77985.13.500e-9042.48conserved unknown protein [Ectocarpus siliculosus][more]
WP_108056571.13.500e-9043.84class I SAM-dependent methyltransferase [Spartobac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL129nonsL129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR010ngnoR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010271NSK010271Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03170.1NO12G03170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03170.2NO12G03170.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556592gene_5492Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100154g4gene4792Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03170.1NO12G03170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03170.2NO12G03170.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03170 ID=NO12G03170|Name=NO12G03170|organism=Nannochloropsis oceanica|type=gene|length=3577bp
CCCCCTTTTTCCTTGTTAGATAAAGTAGTCGCAGTCCTGCTGATGACCCA
GGACGGCCCACATCGGCAGCTCAAGGGCTAGGTGCTTTGCAACGTACCTG
TCATTAAAGCAGTACAATTGTGTCTTCTCTATTTTCTTGCATGTGACCTT
TTCATCCTTAGCCTCCTCTCGTCCCCCTGATCAGACAGCAACAGCCGGAA
ATTGCGCCACAAGAAATAACCACAAACTCTTAACCCGCGAGGCAACGACC
GCAACAAGATGGCGCAACGTGTGGTGGATGCGTTCAACCGCTTTGTCGAT
CAGAAAGTGGTTCCTCGAGTCCAGCCAATCGTCGAAAAGGACATGATGCC
GGACCACCTAATCCGCCTTGGTAAGTACTGCGTGCATCCCAACCCCATGC
CCAGGCAGTGACCAGCTCCTCCGTTCCATTCGACGATTTGCCCATCATTC
ATGTATACCGTGAAAATCAAATTCTTGCTTTGGGAAGGGCGTAGAGATGA
TGTCTGGCCCTCCGTCTTTTTTAATGGCGAGACGCTCACTCAAATGTCTA
GGCGACCAATTATTTGGCAAATTCAGCCCATCCCCGTCATCAGTCTACAC
GCGACAAATGCCAAGTACCTCTCGACCCTCACTACCGTCACGTATTCCCT
CTCTCCATGCTACACGCCCTCAAACCCAGGCATTCGCTCCATGCTCCGTG
ACATGCTCGCGGAGTTCAGCAGCCGCGGCCTCGAGGGGACAATGGTCGCC
AAACAAGCGTACATCGACGAACTTAAATCCCTGCCCATCGCTATTGACAC
CAACGCAGCCAACATCCAACATTACGAAGTGCCCACTTCCTTCTACAAAC
TAGTTCTGGGGCCGTACATGAAGTACTCCTGCGGTCTTTGGCCATCTTCC
AACACGTCTTTCCAGGATTCCGAGACAGAAATGCTGGAGCTCTACTGTCA
ACGAGCTGAGCTGGAGGATGGGATGAAAATTCTAGATCTGGGATGTGGAT
GGGGCTCGGTGTCGCTCTTCGTGGCAAAGAAATACCCTCGTAGTCAGATT
TTTTCTCTGAGCAATTCCGCCACCCAGAGGGAGTATATAGAGAACGAGGC
TCAAAAGAGGGGGTTGACAAACATAACTGTGTGGACGGCGGATATCAACG
GGTTTGAAATTCCGAGGACAACGGGCGCGGGAGGAGGGGGGGGAGGGGCG
GGTGGGTTGTTGAAGGCCTTGATGAAGAAGGCGAGTTTGTCGAGGGTGGC
AGCGGAGGAGCCGGGGGAGGAAGTGTTGGGTGCCTCATCGCCTACCACTC
CCTATACCCCAGTAACGACAGCATCAGCAGATACAACAAAAGGAGCTGCA
GCATCAAGCAGTGCGACGGACGCGGATTTGTTTGACAGGGTGATATCGAT
CGAGATGTTCGAACACATGAAGAACTACCAGAAATTGCTCGCTAAGGTTT
CGTCATGGCTGCGGCCGGGCGGAAAGCTATTCGTGCACATTTTCACGCAT
GCCACCACGGCCTACCATTTCGACAAGAGCTGGATGGCGGAAAACTTTTT
TACGGGCGgtaggtgccgaggaagggagggagtgagcgaggagggtggag
aaggtgagcaggaagatgtcttttgacttttgatcgagccattgatatcc
tcaccttctccttttctttcttgtatgtgttcgtttgtttcatgtcggac
agGCCAGATGCCTTCGCAGGACCTCCTCCTTTACTTCCAGCAAGACTTGA
AGATCGAGGCGCAGTGGGTGGTGAATGGGAAGCACTACAGCAAGACGAAC
GCCGCCTGGCTCGCAAACCTGGATAAGAATAAGACGGAGgtacgggatgc
tttcagagggatgtgggtagagacacaggtgctgggtatttgagaaggag
gaaaaggaggagggttggatgggagaaaagcgaggaaggaggaggaagaa
ggatgaggatggaggaggaacaagacctcttttcccgattattgctatcg
tgaaacacacaacattcgtctgataaaaatgcattttaaaatgtcttttc
gtcttgtcgcgggagtaccctattcaccaaccctctcgccttgatcctcc
cattcacacatacaccccctgtcagGCGAAGGCTCTGCTGGCCAGTATCC
ACGGTTCAGAGAAAGCGACCAAGGCCTTCGTGGACTGGCGGCTCTTCTTT
CTGACTCTGGTGGAGTGTTTTGCCATGGACGACGGCAATCAGTGGTCGGT
CAATTTATACCGGTTTGTAAAACCTCCTGCGGGGGGTAATGGTCGCACAG
GTGGGAGTGCTTGAGTGCTTGAGCGGGTGGGTGTAGGTAGTGGTGGGTGT
GAATGTGAAATTGACCCGGCTATGTGATTTAAATAGCTGAAAAAAGTCTA
GAAAACATGTTGCTTGTTTGGAAAGTGAGTGAAAGAATGCAGCTCATCGA
GCCTCATGAATGGTGATGCCGGCGCCGCGGAGTGTCTTGTAGGAGCATGT
GGTGGAGGGAGAGGAGAGATCGCGGGGACTGTGCAGGCGCGAAATGGGAG
AAATAGAAAAAAGACTGCATGCCGGGTAAGCATTGATTTTTGACGCCGAA
GACATTTAAAGGGACAGCGTCACGTCGAGAGTGTTGAATTTCGTGTAGAT
ATGTGAGAATCAAGACTGCAGCAGCATAGCAGCACGGTGCGTTTGGGCTT
GCCGGAATGATGAGATAGAAATAAAAAGAAAACATTTTTTAGAAGAATCC
AAAATAAGGGGGGGCAACAATGAGACTCAAAATCGTAAATGGTGAAAGCC
GACAAAAAGGAGGACTAAGATTAGCAGGGCAATGATCATCATGCCTTTTC
CGGTAACAACCTTCTCTCCTTCATCAAAACTCTAAATACCGCTAATGACC
TGTCATTAATATAGGTAGAGGAGAGGGTGCGGATAAGGAAACGAATCGTT
GAGGAGAATATGTAGATTTGCTGTAAGGGACAAGATCGGGGTACTGAAAA
ATAGAGCCCTGACGAAGGGAGGGGATGTTTTGGAAAGAAGGAAGACGGAA
GTTTACAGTGAAGCTGTGGGCATATTGCTTTCATGCAGGGTGGACGTGAA
TTTGGGTGAGCGATCAGGTATAATTATCCCCAAAAAGGCAAGAAATGGTA
GGAACACACATAAATGAAAGCAAAGGAAAGGAAGAAGTTATGTTCTGGGG
ATATTACCCCTCCGCGTCGTGTGCTGCACACTACGATATGTCGAAGCGAG
CGATTAAGGATTGTGTGGCTTTTGCTTTGCTGGATAGCTTGCTCGCTACG
CCCTCTCTACTCACATGTATAGCTATGTGGTCGCCCTACACGACAGATAT
ATCACACCCATGGACACCCGCAAGGCATGGGCCGTTTCGATCTTCATTCC
TCCAGGTGGGTACTTAGTAAGGTGATGTCACTCTTTTCGGCAGATTCCAC
ACGATGGGCACCACATCCACACCTATTTGGCCATCCTGCGTCCAATCCAA
GACTGTACACAAACCAATGTGCTTTTCAGACCTAACTGGCTGTGCCTCAC
ATCAATAGCCCCTTCACCCTCACAGGC
back to top

protein sequence of NO12G03170.1

>NO12G03170.1-protein ID=NO12G03170.1-protein|Name=NO12G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MAQRVVDAFNRFVDQKVVPRVQPIVEKDMMPDHLIRLGIRSMLRDMLAEF
SSRGLEGTMVAKQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPY
MKYSCGLWPSSNTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSL
FVAKKYPRSQIFSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPR
TTGAGGGGGGAGGLLKALMKKASLSRVAAEEPGEEVLGASSPTTPYTPVT
TASADTTKGAAASSSATDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRP
GGKLFVHIFTHATTAYHFDKSWMAENFFTGGQMPSQDLLLYFQQDLKIEA
QWVVNGKHYSKTNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLF
FLTLVECFAMDDGNQWSVNLYRFVKPPAGGNGRTGGSA*
back to top

protein sequence of NO12G03170.2

>NO12G03170.2-protein ID=NO12G03170.2-protein|Name=NO12G03170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MYTVKIKFLLWEGRRDDVWPSVFFNGETLTQMSRRPIIWQIQPIPVISLH
ATNAKYLSTLTTVTYSLSPCYTPSNPGIRSMLRDMLAEFSSRGLEGTMVA
KQAYIDELKSLPIAIDTNAANIQHYEVPTSFYKLVLGPYMKYSCGLWPSS
NTSFQDSETEMLELYCQRAELEDGMKILDLGCGWGSVSLFVAKKYPRSQI
FSLSNSATQREYIENEAQKRGLTNITVWTADINGFEIPRTTGAGGGGGGA
GGLLKALMKKASLSRVAAEEPGEEVLGASSPTTPYTPVTTASADTTKGAA
ASSSATDADLFDRVISIEMFEHMKNYQKLLAKVSSWLRPGGKLFVHIFTH
ATTAYHFDKSWMAENFFTGGQMPSQDLLLYFQQDLKIEAQWVVNGKHYSK
TNAAWLANLDKNKTEAKALLASIHGSEKATKAFVDWRLFFLTLVECFAMD
DGNQWSVNLYRFVKPPAGGNGRTGGSA*
back to top
Synonyms
Publications