NO12G03090, NO12G03090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03090 vs. NCBI_GenBank
Match: EWM25717.1 (sugar nucleotide epimerase [Nannochloropsis gaditana]) HSP 1 Score: 367.9 bits (943), Expect = 2.300e-98 Identity = 176/234 (75.21%), Postives = 197/234 (84.19%), Query Frame = 0 Query: 1 MRTAV---LFATILLQAAAPTMASFSF------GQNSLECKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNLAVHNYANEGGVNNIIHDAQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNYTSSSGPAFLR 226 MRT V ++A +L AAP +A FSF G + CKTVVPQNPV+LQ+YAS RW+IHQQMATQAGNPNG+WN CV+AEYTIK+ NN+AVHNYANEGGVNNII +A LCAT+RDP+NDPGRL+VGPCFLEF +R +GPYFIVAYDEAEGYAL+SGGSPTIPTKDGLCTTQRGFNNAGLW+FSRSNVRDE LIQK+R IAV KGFDVDVLEDVQH GC Y SS PA LR Sbjct: 1 MRTTVSASIYAILLTATAAPVLADFSFDKAWFHGGDGGACKTVVPQNPVNLQEYASKRWYIHQQMATQAGNPNGEWNSCVYAEYTIKSPNNVAVHNYANEGGVNNIIREADLCATVRDPENDPGRLAVGPCFLEFANRLLYGPYFIVAYDEAEGYALISGGSPTIPTKDGLCTTQRGFNNAGLWIFSRSNVRDEALIQKLRGIAVEKGFDVDVLEDVQHEGCTYRPSSEPAGLR 234
BLAST of NO12G03090 vs. NCBI_GenBank
Match: OLQ03644.1 (hypothetical protein AK812_SmicGene13373 [Symbiodinium microadriaticum]) HSP 1 Score: 154.1 bits (388), Expect = 5.300e-34 Identity = 83/180 (46.11%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 41 DLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNL-----AVHNYANEGGVNNIIHD--AQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGC 214 DL + S RW+I QQM T+ P Q N CV+AEY ++ L AVHN+A E + +HD +++CA + D + G+L V PC FL GPY++V YDE GYAL+SGG+PT+P ++G C T G N++GLW+F+R RDE L+QKVR IA KGFD+ VL DV C Sbjct: 1924 DLDSFISKRWYIQQQMETKY-LPKSQ-NRCVYAEYKLEPKKTLLGYDVAVHNHAEEVAPPHTVHDSGSKICAKVVDKAH--GKLEVAPC---FLPSALAGPYWVVDYDEGAGYALISGGAPTVPAEEG-CKTGSGTNDSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSDC 2095
BLAST of NO12G03090 vs. NCBI_GenBank
Match: OLQ03971.1 (hypothetical protein AK812_SmicGene12987 [Symbiodinium microadriaticum]) HSP 1 Score: 154.1 bits (388), Expect = 5.300e-34 Identity = 84/186 (45.16%), Postives = 112/186 (60.22%), Query Frame = 0 Query: 41 DLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNL-----AVHNYANEGGVNNIIHD--AQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNYTSSS 220 DL + S RW+I QQM T+ P Q N CV+AEY ++ L AVHN+A E + +HD +++CA + D G+L V PC FL GPY++V YDE GYAL+SGG+PT+P ++G C T G N++GLW+F+R RDE L+QKVR IA KGFD+ VL DV C + S Sbjct: 198 DLDSFISKRWYIQQQMETKY-LPKSQ-NRCVYAEYKLEHKKTLLGYDVAVHNHAEEVAPPHTVHDSGSKICAKVVDKAR--GKLEVAPC---FLPSALAGPYWVVDYDEGAGYALISGGAPTLPAEEG-CKTGSGTNDSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSDCGSIAQS 375
BLAST of NO12G03090 vs. NCBI_GenBank
Match: XP_003060838.1 (hypothetical protein MICPUCDRAFT_41142 [Micromonas pusilla CCMP1545] >EEH54488.1 hypothetical protein MICPUCDRAFT_41142 [Micromonas pusilla CCMP1545]) HSP 1 Score: 132.5 bits (332), Expect = 1.700e-27 Identity = 82/222 (36.94%), Postives = 113/222 (50.90%), Query Frame = 0 Query: 12 LQAAAPTMASFSFGQNSLECKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNLAVHNYANEGGVNNIIH--DAQLCATIRDPQND---PGRLSVGPCFLEFLDRFAFGPYFIVAYDEAE----------GY--ALVSGGSPTIPT-KDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNY 216 L A + A G + C V +P DL YA+ W++ QQ + P + YCV A Y + + + V+N AN GGV+ D + DP D P +L VGP FL RF +GPY++VA +E GY A+VSGG PTIPT DG C T G N++G W+F+R + E ++++R +A KGFD+ LE V H GC Y Sbjct: 23 LNAPSNAQAGGRRGAAAEPCAPVSTASPFDLDAYAAHAWYVQQQQVVRY-QPR-ESLYCVRASYRVNDDDAVDVYNTANVGGVDGPPQNSDGFRLRAVIDPDADDDAPSKLRVGP---RFLPRFLYGPYWVVAVSPSEPRDESDPVGPGYDWAIVSGGQPTIPTGDDGKCRTGSGQNDSGFWLFTREKIASEATLEEMRAVASEKGFDLSALEPVTHEGCEY 239
BLAST of NO12G03090 vs. NCBI_GenBank
Match: XP_007508739.1 (predicted protein [Bathycoccus prasinos] >CCO19825.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 122.5 bits (306), Expect = 1.700e-24 Identity = 67/186 (36.02%), Postives = 100/186 (53.76%), Query Frame = 0 Query: 31 CKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNLAVHNYANEGGVNNIIHDAQLCATIRDPQND-PGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNY 216 C V + V ++ YAS W++ Q+ + +CV A YT+ + L V N+A +G V + + P D +L VGP +F+ R +G Y+IVAY+E EG+A++SGG PTI DGLCTT+ G N GLW+F+R E L++ +++ A + G D +L VQ GC Y Sbjct: 48 CPPVPTVSDVSIEAYASKPWYVQAQLPNRYQPVENL--FCVRAVYTVTSPTTLDVFNFARKGSVEGEPSNEDMVLNAFIPDVDVKSKLKVGP---KFVPRALYGDYWIVAYEEEEGWAIISGGQPTIFVSDGLCTTESG--NQGLWLFTREKEVSEELVETMKKKANALGIDTSMLVTVQQTGCEY 226
BLAST of NO12G03090 vs. NCBI_GenBank
Match: ABV22241.1 (lipocalin-like protein [Karlodinium veneficum]) HSP 1 Score: 119.4 bits (298), Expect = 1.400e-23 Identity = 74/183 (40.44%), Postives = 99/183 (54.10%), Query Frame = 0 Query: 41 DLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTS-----NNLAVHNYANEGGVNNIIHDAQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNYTSS 219 DL+ Y S +W+I QQM + P N CV AEY++ S N+ V N+A + +CA + G+L V PC FL F GPY+IVA+D+ G+ALVSGG+P +G C T G N++GLW+F+R RD+ L+QKVR IA +KGFDV V D C S Sbjct: 40 DLKWYTSSKWYIQQQMII-SYLPADYLN-CVTAEYSLLDSPTLLGYNIKVMNHAENKDGKPLGPLTTICAKV--VNETAGKLEVSPC---FLPTFLAGPYWIVAFDKEAGWALVSGGAPKNQGTNG-CQTGTGTNDSGLWIFTRKPDRDDALLQKVRGIAAAKGFDVSVFRDTDESTCRSLQS 214
BLAST of NO12G03090 vs. NCBI_GenBank
Match: OLQ05539.1 (hypothetical protein AK812_SmicGene11295 [Symbiodinium microadriaticum]) HSP 1 Score: 114.0 bits (284), Expect = 6.100e-22 Identity = 72/181 (39.78%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 38 NPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSN-----NLAVHNYANEGGVNNIIHDAQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEGYALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGC 214 N DL + S RW+I QQM T+ P Q N CV+AEY ++ ++AVHN+A EG V+ A G ++ YDEA GYAL+SGG+PT+P + G C T G N +GLW+F+R RDE L+QKVR IA KGFD+ VL DV C Sbjct: 198 NNFDLDSFISKRWYIQQQMETKY-LPKTQ-NRCVYAEYKLQQKKTFWGYDVAVHNHA-EGVVDK----------------------------------ARGKLEVLDYDEAAGYALISGGAPTLPAEAG-CMTGSGTNGSGLWIFTREQKRDEALVQKVRAIAAQKGFDLSVLNDVDQSAC 340
BLAST of NO12G03090 vs. NCBI_GenBank
Match: OEU10198.1 (apolipo protein D [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 113.6 bits (283), Expect = 7.900e-22 Identity = 80/218 (36.70%), Postives = 109/218 (50.00%), Query Frame = 0 Query: 18 TMASFSFGQNSLE-CKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNN-----LAVHNYA--NEGGVNNIIHDAQLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAY----DEAEGYALVSGGSP--TIPTKD--------GLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGC 214 T + S Q+S + C TV + +L +YAS WF+ QQ A P N CV A+Y++K +N + V NY ++GG + LCA ++ P +L V PC FL + GPY+IVAY D +GYALVSGG P +P + C T G NN+GLW+ +R ++Q+VR IA KGF VL DV H C Sbjct: 14 TSITGSIAQSSPDTCLTVTTVDNFNLTQYASAPWFV-QQQAVNTYTPL-DLNRCVTAQYSLKEHSNFWGYTIDVFNYGVKSDGGQST---GGDLCADYN--KDIPSQLKVAPC---FLPKIFAGPYWIVAYQEETDNNDGYALVSGGQPRNLVPNESTCGENGTAACCKTGDGVNNSGLWILTRQPTPSNDILQEVRTIAQQKGFSTSVLFDVDHTNC 221
BLAST of NO12G03090 vs. NCBI_GenBank
Match: XP_002502730.1 (hypothetical protein MICPUN_59023 [Micromonas commoda] >ACO63988.1 hypothetical protein MICPUN_59023 [Micromonas commoda]) HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21 Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 31 CKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTI-KTSNNLAVHNYANEGGVNNIIHDA---QLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAY-----DEAEGY--ALVSGGSPTIPT--KDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNY 216 CKTV +DL+ YA+ W++ +Q + P + YCV A YT+ + + V N A GGV+ +A +L A + D +L VGP FL RF +GPY+IVA D GY A+VSGG+PT T ++GLC+T N++GLW+F+R +++++R A GFD VL+ V GC Y Sbjct: 47 CKTVNTVEGLDLRAYATHPWYVQEQQVVRY-QPLDNF-YCVRARYTVDDAGDEVEVLNSARRGGVDGDDTNARGTRLRAVLEDKDASTSKLLVGPA---FLPRFTYGPYWIVAVSPDAPDPELGYEWAIVSGGAPTRLTDPENGLCSTGEDMNDSGLWLFTREPTVGADVVERMRATARDAGFDTSVLKPVTQEGCEY 239
BLAST of NO12G03090 vs. NCBI_GenBank
Match: OUS42696.1 (apolipo protein D/Lipocalin [Ostreococcus tauri]) HSP 1 Score: 111.7 bits (278), Expect = 3.000e-21 Identity = 75/229 (32.75%), Postives = 110/229 (48.03%), Query Frame = 0 Query: 2 RTAVLFATILLQAAAPTMASFSFG-QNSLECKTVVPQNPVDLQKYASGRWFIHQQMATQAGNPNGQWNYCVFAEYTIKTSNNLAVHNYANEGGVNNIIHDA----QLCATIRDPQNDPGRLSVGPCFLEFLDRFAFGPYFIVAYDEAEG----------YALVSGGSPTIPTKDGLCTTQRGFNNAGLWVFSRSNVRDETLIQKVREIAVSKGFDVDVLEDVQHVGCNY 216 R + L A +F G + S EC V P +P DL Y W++ Q T + P +CV A YT+ +++ N AN GV+ +A +L I DP N P +++VG + FL RF +GPY++VA D + G +A++SGG PTI +GLC + GLW+F R E ++ K++E S G D DVL V GC++ Sbjct: 12 RAVARLGAVALALALTRSHAFVLGVEASEECARVEPVDPFDLDAYVEAEWYVAAQKPT-SYQPTRDL-FCVRANYTVVDERTISIWNTANRDGVDGSPRNADGRFKLRGLIEDP-NIPSKIAVG---MRFLPRFLYGPYWVVATDVSPGDAEFDERGYSWAIISGGQPTISRGNGLCAP-----SGGLWLFVRDPEVSEEVVSKMKEKCESLGIDPDVLIPVTQEGCSF 229 The following BLAST results are available for this feature:
BLAST of NO12G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03090 ID=NO12G03090|Name=NO12G03090|organism=Nannochloropsis oceanica|type=gene|length=2210bpback to top protein sequence of NO12G03090.1 >NO12G03090.1-protein ID=NO12G03090.1-protein|Name=NO12G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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