NO12G03080, NO12G03080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03080 vs. NCBI_GenBank
Match: EWM25729.1 (protein prenyltransferase alpha subunit repeat containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 6.700e-53 Identity = 168/544 (30.88%), Postives = 235/544 (43.20%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLE----HLAK---NSRKVSKVGEKDQ----HXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEK-------------------------GLTLKIETSDEEKKE-------EAALWQ-QEVEFVRGW-TGRHVGDMAAMNYLQQVLTHAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---------LNSLLELNFASLDTYPGHESLWYQRRGLLELWMATMRRREVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSYHAQITL----------YNAEMDRGSHYMQGERPWEGGEGGREGGLLWDAAAKRKQKLSAWAHRCWMVLRWRKGEGWEGKGAKENER--AALWEELMALEASDSLLFVPPGYKCLL 481 F+LE HKLGIATWA+K I++EAL + A ++A + D + + TRALLLIN D Y+AWN+RKRL++ G L A +E++F+D++ K++KK SAWAHRRWCV+ +LE HL + R V ++Q +T +IA P+NY+AWT R V+ +D+ + D + E G + + DEE +E E W ++ E + W TG +GDM+A ++LQQVLT ++ PS L L N LD YPG ESLWYQRRG L L A MRR S H + L +E+ R SHY+QG PWEG GL+WD ++R+Q+L AW+ +CW++LR WE +GA + L EEL +LEAS + +PPGYK L+ Sbjct: 59 FLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVIL-QDLRLQDGNKRENDVMGNNELEEVSRISRASEKIRAVGGGKRRKDHKDEEGREKTQESGGEMEAWSVEQTERLWNWATGSRMGDMSAFHHLQQVLT-LLAAYPSWRFLLAEIGRAGGGKEGARETSHLRVRMRGRRIKSEDDRDQACSELPGRNCAEEATQEGLLGVLQMFLARNARLLDQYPGRESLWYQRRGFLSLLGAIMRR---GCPWAGGRGGGDWPQLSNEEAGGEKARLSQHGKAKLPSLSDPCARWIESELARASHYLQGRGPWEG-----RAGLMWDVESRRRQRLLAWSFKCWVILR------WENRGATPTAQKLRPLREELASLEASQPNMAIPPGYKHLV 586
BLAST of NO12G03080 vs. NCBI_GenBank
Match: CBJ28281.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.2 bits (274), Expect = 2.000e-20 Identity = 82/272 (30.15%), Postives = 124/272 (45.59%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKE-------ALHMIRRITTASSKARE--RGETGQDDEKEDMMVDEMA---------TRALLLINPDTYTAWNVRKRLIVGGYL---SAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHR-WRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPS 253 F+L+ HKLG++ ++ P+ E A RR+ A S E+ + E + +A TRALLL+N D +AWN RK+L+V G S E+ ++LIF+K+ K +AWAHRRWC N R ++ + H V ++AE PKNY+AWT R W V+R D ++GL A L ++E+EFV W HV D +A+N+ + V + ++SP+ Sbjct: 73 FILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRRAHSSLERMPSEESSKPKEGRGGALSGVAVAAATLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRWC-------WRNNERFRARHADITWH---------PLDEQEELKVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADASAGQEGLP---GEDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNVFSALAAMSPA 325
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_024577511.1 (Protein geranylgeranyltransferase type II, alpha subunit [Plasmopara halstedii] >CEG41142.1 Protein geranylgeranyltransferase type II, alpha subunit [Plasmopara halstedii]) HSP 1 Score: 105.1 bits (261), Expect = 6.300e-19 Identity = 70/246 (28.46%), Postives = 108/246 (43.90%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAI 248 AF LE HKLG+A A KP+F+ A + + D+E+ +V TRA+LLI+ D YTAWN RK + G+L+A DE+ F +L+F+ + K WA+RRW + + + ++N + E + V +++AE P+NYHAW+ R HW L + L QE++ + W H+ D + N+ Q L I Sbjct: 37 AFTLENHKLGVAFAAGKPLFQAARLQFHVLNARFQEKVTEITQSNDNEQRAQLVH--CTRAILLISADFYTAWNTRKLFVTRGWLNAHDEIQFTNLVFTLHPKSIDTWAYRRWLANLVCQSSSENDNLIFYSREIE--------------------VCSRLAEQKPRNYHAWSFR--------------HWIVSQLPV-------------VLTLQELKDMERWCRTHITDHSGWNHRQHTLNELI 233
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_002586706.1 (hypothetical protein BRAFLDRAFT_217651 [Branchiostoma floridae] >EEN42717.1 hypothetical protein BRAFLDRAFT_217651 [Branchiostoma floridae]) HSP 1 Score: 102.4 bits (254), Expect = 4.100e-18 Identity = 71/242 (29.34%), Postives = 113/242 (46.69%), Query Frame = 0 Query: 4 VLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEM-ATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLT 245 V+E +KLGI TW L+ IF A + R AR R ++G+ + + ATRA+LL+ D TAWN+RK L+ L ++ +L F L+ +K+ K + +AHRRW + ++++ + S + G K + V + AE P NY+AWTHR VV E+V C H++ + +E+ R W RH+ D + + Y Q ++T Sbjct: 42 VVENNKLGIETWCLELIFPYAHDKVLR-------ARSRDDSGRKIKVSRSARSLLEATRAVLLVQADCLTAWNIRKELVEAEDLKSIQDLKFAALVLTKHPKSSETFAHRRWLLKQVVQKTSSTSLQPHPRGRKAE------LPCDEKLLEAELAVCQRSAERYPSNYYAWTHRAWVV--ENVARC--HYK--------------------ILMRELSDTRHWISRHISDHSGLQYRQFLIT 246
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_008617176.1 (hypothetical protein SDRG_12872 [Saprolegnia diclina VS20] >EQC29409.1 hypothetical protein SDRG_12872 [Saprolegnia diclina VS20]) HSP 1 Score: 100.5 bits (249), Expect = 1.600e-17 Identity = 71/246 (28.86%), Postives = 111/246 (45.12%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAI 248 AFVLE HKLGIA L + +EA + + A+ ++ + D +E ATR +LL+ D YTAWN RK+L+V G LS DE+ F++++ S ++K WAHRRW + RL+ S ++ + ++ E P+NYHAW++R+RV H + L +++T+ R W RHV D + N+ Q +L + Sbjct: 34 AFVLEDHKLGIALDMLPALHREA----KDVFFAARRSND-----VDSIRE-------ATRCMLLVCADFYTAWNARKQLLVQGLLSLRDEITFMNVVLSHHSKSIDTWAHRRWVLDRLVVTTLTASFLSDELA-----------------------LCLRLTEQYPRNYHAWSYRYRVC---------CHLSPEALAQELDTN------------------RTWCERHVADHSGWNHRQLLLARLL 213
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_002899931.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60558.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16 Identity = 74/246 (30.08%), Postives = 105/246 (42.68%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAI 248 AF LE HKLG+A A P+F+ A + +E E Q + E TRA+LLI+ D YTAWN RK + G+L A DE+ F +L+F+ + K WA+RR RL E L+ E++ H V +++AE P+NYHAW+ R HW L L L ++E+E + W HV D + N+ Q L + Sbjct: 40 AFFLEDHKLGVAFAAGIPLFQAARTQFHPLNALLQ--QEAPEITQFEFSERRAQLLHCTRAILLISADFYTAWNTRKSFVSRGWLDAQDEVQFTNLVFTLHPKSIDTWAYRRSLAIRLCESLS----------EEELH----------NFYEQQIEVCSRLAEQKPRNYHAWSFR--------------HWIVSRLPL-------------GLARKELEDMEIWCRTHVTDHSGWNHRQHTLNELL 236
BLAST of NO12G03080 vs. NCBI_GenBank
Match: OQR86266.1 (hypothetical protein ACHHYP_10787 [Achlya hypogyna]) HSP 1 Score: 95.5 bits (236), Expect = 5.000e-16 Identity = 68/249 (27.31%), Postives = 113/249 (45.38%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVS 251 AFVLE HKLG+A + + +E A+E +G+ +++ A+RA+LL+ D YTAWN RK+LI GYL ++E+ F++++ S ++K WAHRRW ++RL+ A + + + E++ + ++ E P+NYHAW++R+ C G L E++ R W RHV D + N+ Q +L ++ S Sbjct: 20 AFVLEDHKLGVALDMIPALHRE--------------AKEAFFSGRKTNDPQRVLE--ASRAMLLVCADFYTAWNARKQLITDGYLGLLEEIQFMNVVLSHHSKSIDTWAHRRWVLTRLV--AATPAAVLQPLLEQE------------------LALCLRLTEQYPRNYHAWSYRY----------CICGHLPPGALL-----------------GELQQNRSWCERHVADHSGWNHRQLLLLRLVNPS 205
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_012195105.1 (hypothetical protein SPRG_01505 [Saprolegnia parasitica CBS 223.65] >KDO34369.1 hypothetical protein SPRG_01505 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 95.1 bits (235), Expect = 6.500e-16 Identity = 58/178 (32.58%), Postives = 85/178 (47.75%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRV 180 AFVL+ HKLGIA L + +EA + ++ R R ATR +LL+ D YTAWN RK+L+V G LS DE+ FI+++ S ++K WAHRRW + RL+ + +S + ++ E P+NYHAW++R+RV Sbjct: 34 AFVLKDHKLGIALDMLPALHREAKDVFFAARRSNDVDRIR----------------EATRCMLLVCADFYTAWNARKQLLVQGLLSLRDEITFINVVLSHHSKSIDTWAHRRWVLDRLVATTPLTASFLS----------------------DELALCLRLTEQYPRNYHAWSYRYRV 173
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_012946849.1 (PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like, partial [Aplysia californica]) HSP 1 Score: 94.7 bits (234), Expect = 8.600e-16 Identity = 74/269 (27.51%), Postives = 107/269 (39.78%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSR-----------------------KVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKI----AEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLT 245 F+L HKLG+ WA+K + K A A+ RG + + + + + +RA+LL NPD YTAWN+RK LI YLS D+L LI SK+ K + HRRW +LL+H +S VS E H +I A+ P NYHAW+HR VV+ H L + + E++ WT +H+ D + +Y Q +L+ Sbjct: 40 FILRDHKLGVEAWAVKVLLKYA---------ANRLIGWRGRLSSEKFLDSIELCNL-SRAVLLFNPDNYTAWNIRKELIENSYLSISDDLMLGALILSKHPKSPETFIHRRWLFQQLLDHCLSSSSGSNTSCSAAGASTDAVNMEAIDVDVSAAPEPRDHLSGAFSLESSRLLKSHTQRELEICGGAADHYPSNYHAWSHRIWVVQ---------HCLNSSLQVLL---------------YELKMTEDWTRQHISDHSGFHYRQFLLS 274
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_013088227.1 (PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Biomphalaria glabrata]) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15 Identity = 73/271 (26.94%), Postives = 109/271 (40.22%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNS----RKVSKVGEKD-------------------------QHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLT 245 F+L+ HKLG+ WA+K + K + T R + + + +++ TRAL+L NPD YTAWNVRK L+ G+L+ D+L F L+ SK+ K A + HRRW +LL+H +S V+ V E + V A+ AE NYHAW+HR ++ + L ++ E KE A W H+ D + +Y Q +LT Sbjct: 41 FLLQEHKLGVEAWAVKVLMK-------YVATRLIGWRSQNPLVKFIDPTEVL---NLTRALILFNPDNYTAWNVRKELVESGFLNIADDLQFGALVLSKHPKSAETFIHRRWLFQQLLDHCLSSSLDSNGSVAAVPENNADSSISMDLIDVDIVASPENDGPLSMDQSLECSRLFKLHTQLEMRVCARAAERYQCNYHAWSHRIWII-------------QHCLNCSLQVLLSEMKETEA-----------WNSTHISDHSGFHYRQFLLT 277 The following BLAST results are available for this feature:
BLAST of NO12G03080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03080 ID=NO12G03080|Name=NO12G03080|organism=Nannochloropsis oceanica|type=gene|length=2047bpback to top protein sequence of NO12G03080.2 >NO12G03080.2-protein ID=NO12G03080.2-protein|Name=NO12G03080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=508bpback to top protein sequence of NO12G03080.1 >NO12G03080.1-protein ID=NO12G03080.1-protein|Name=NO12G03080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bpback to top Synonyms
Publications
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