NO12G02960, NO12G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02960 vs. NCBI_GenBank
Match: EWM25727.1 (d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana] >EWM25728.1 d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana]) HSP 1 Score: 373.2 bits (957), Expect = 8.700e-100 Identity = 194/313 (61.98%), Postives = 236/313 (75.40%), Query Frame = 0 Query: 54 GMSVGITPREFLMERPPGPYTCLRARDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTP--IDAFVTVH---AAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPGGEVALSRPVGSGR----------DREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRVEGTSVGLSGVDLPMAPGPMTNLLRARLLFDMNEGWEGMEEL 352 G+SV TPR+FLMERPPGPYTCLRARD +LLGFDFH QRL+H I +S G S V E+R +VL+VI AL +A+ E+ E T D FVTVH ++I S +SG+ L+AHAV+MPYA+MPP +TLE+RG+GR+ P++KHS+W+RDRQ LERFR GPGGEVALSR + +GR REVLEGLVSNIF VKGGKL+TA DG+LPGHMR+M L AA +LGVPVG+ + + +E+I EWEEAFLTGSGRVLVPIGRVEGTSVGL VDL APGP+TNL+RARLL+DM +GWE + L Sbjct: 55 GVSVRKTPRQFLMERPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRVEGTSVGLPPVDLAAAPGPITNLVRARLLYDMEDGWENLRSL 367
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETI52000.1 (hypothetical protein F443_04765 [Phytophthora parasitica P1569]) HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21 Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P EV LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + RV++ + R+ Sbjct: 36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETK91860.1 (hypothetical protein L915_04653 [Phytophthora parasitica] >ETL45258.1 hypothetical protein L916_04608 [Phytophthora parasitica] >ETP21785.1 hypothetical protein F441_04766 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21 Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P EV LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + RV++ + R+ Sbjct: 36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETL98429.1 (hypothetical protein L917_04493 [Phytophthora parasitica] >ETP49701.1 hypothetical protein F442_04844 [Phytophthora parasitica P10297] >ETP49702.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF64469.1 hypothetical protein AM587_10017234 [Phytophthora nicotianae]) HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21 Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P EV LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + RV++ + R+ Sbjct: 36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETO80744.1 (hypothetical protein F444_04818 [Phytophthora parasitica P1976] >ETO80745.1 hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21 Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P EV LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + RV++ + R+ Sbjct: 36 FLQSRPAGVYTCARAIASVEISSELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281
BLAST of NO12G02960 vs. NCBI_GenBank
Match: OWZ04225.1 (Thioredoxinlike protein [Phytophthora megakarya]) HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20 Identity = 85/264 (32.20%), Postives = 124/264 (46.97%), Query Frame = 0 Query: 62 REFLMERPPGPYTCLRARDGALLGFD---------FHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALL--RRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPI 308 + FL RP G YTC RA+ L D FH+QRL + S ++ + L + L L R +E +D ++V S S + ++ + P + A T+ V G+GR + KHS+W+ DR LE+ R P EV LSR G G DR +LEGL++N F VK GKL TA +GVL G R + L+A L +PV V + ++ E+ W+ AF+T + RV+V + Sbjct: 34 KSFLQSRPAGVYTCARAKASVALDSDLSTLLVEWSFHLQRLSAGLTT---MDSNFNTDKLMVDKLKMATRRLAIMVLTQWRAIE----------TVDGMLSVLWCPSPDSDEYSVAVHVCPMLTPTCL---ASTVLVYGEGRTNARCKHSQWIEDRIPLEKHMIQVEETRGEPIHEVLLSR-AGPGGDRLLLEGLITNFFIVKEGKLYTADEGVLQGSTRELVLKACYDLLIPV--VLEAPKLSELDSWQAAFVTSAVRVVVDV 278
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETM51590.1 (hypothetical protein L914_04601 [Phytophthora parasitica]) HSP 1 Score: 109.4 bits (272), Expect = 2.300e-20 Identity = 83/263 (31.56%), Postives = 127/263 (48.29%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P E LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + RV++ + R+ Sbjct: 36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEALLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281
BLAST of NO12G02960 vs. NCBI_GenBank
Match: OQR99382.1 (hypothetical protein ACHHYP_06953 [Achlya hypogyna]) HSP 1 Score: 108.2 bits (269), Expect = 5.200e-20 Identity = 91/286 (31.82%), Postives = 135/286 (47.20%), Query Frame = 0 Query: 59 ITPREFLME---RPPGPYTCLRARDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVT-MPYAIMP---PAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPG--------GEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIG---RVEGTSVGLSGVDLPMAP 327 +TP+EFLM G YTCLR R G + + FH RL + A ED+ L E+ + F +D + ++++ V N A+ + A +P P TL V G GR++P +KH W+ +R+ LE + GEV LS V G R +LEGL++N F +KGGK+ TA D VLPG R++ +EA SLG+P+ + + +EE WE AF T R++VP+ R + T+ + +P AP Sbjct: 1 MTPKEFLMSLAYESGGEYTCLRLRRGRICMWPFHRSRL-------------------------TVDPAAEDS--LPATIEAAARARFGAAVDTGDFMVTVVNANGEHHVHVCNMPALAFVSDAAVPTVRPIATL-VLGSGRRNPTVKHVDWIYERKALEVTAAAKAAELGLDAFGEVLLSHTV-QGTTR-LLEGLITNFFVLKGGKVYTAGDAVLPGSTRALVMEACNSLGIPL--LLEAPVLEESASWEAAFTTSVVRLIVPVATLYRQDQTTGAWATHTVPTAP 254
BLAST of NO12G02960 vs. NCBI_GenBank
Match: XP_008902131.1 (hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310] >ETN12116.1 hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310]) HSP 1 Score: 104.0 bits (258), Expect = 9.800e-19 Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGS 301 FL RP G YTC RA L+ + FH+QRL I + ++ + K LD L+ A L + + +T D ++V S G+ ++ + P + A T+ V G+GR + KH++W+ DR +E+ R P EV LS+ G G DR +LEGL++N F VKGGKL TA +GVL G R + L+A L +PV V + ++ E W+ AF+T + Sbjct: 36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTST 271
BLAST of NO12G02960 vs. NCBI_GenBank
Match: CBN75813.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 103.2 bits (256), Expect = 1.700e-18 Identity = 93/283 (32.86%), Postives = 134/283 (47.35%), Query Frame = 0 Query: 60 TPREFLMERPPGPYTCLRARD-GALLGFDFHMQRLMHAIRASG-GSGSRVQEKE-MRIQVLDVIAGALED--------------AALL----RRV--EESGE-----QKPFKTPIDAFVTVHAA------ISSSSLSSGLVLNAHA---VTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPGG-EVALSR----PVGSGRDREVLEGLVSNIFAV-KGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTG 300 +P+EFL+ PPGPYTCLR D ++ FH+ RL + +A+G G +R Q ++ + + ++ IA E +L RR+ E++GE +P T AF + + + + + AHA T P P + + + G GR P+ KHS W+RDR+ LE ++ G EV LS P G+ R R +LEGL SN F V + G + TA GVL G MR + + G+ V D I G W EAFLTG Sbjct: 98 SPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGT--TAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQTGAQEVVLSEIGFSPEGTTR-RLLLEGLTSNFFVVEEDGAVSTAPSGVLLGGMRQLLISVCDKEGIEVR--FDAPDISRAGRWREAFLTG 375 The following BLAST results are available for this feature:
BLAST of NO12G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02960 ID=NO12G02960|Name=NO12G02960|organism=Nannochloropsis oceanica|type=gene|length=2287bpback to top protein sequence of NO12G02960.1 >NO12G02960.1-protein ID=NO12G02960.1-protein|Name=NO12G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top Synonyms
Publications
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