NO12G02880, NO12G02880 (gene) Nannochloropsis oceanica

Overview
NameNO12G02880
Unique NameNO12G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length999
Alignment locationchr12:799607..800605 -

Link to JBrowse

Properties
Property NameValue
DescriptionSolute carrier family 25 member 45
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:799607..800605 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO12G02880 vs. NCBI_GenBank
Match: EWM25764.1 (solute carrier family 25 member 45 [Nannochloropsis gaditana])

HSP 1 Score: 464.2 bits (1193), Expect = 3.500e-127
Identity = 234/333 (70.27%), Postives = 266/333 (79.88%), Query Frame = 0
Query:    1 MDELAAQELEIHENTAGNIVPTLHSFIGGCVGGLVSLVAGQPFDTIKVRLQTSTKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRRIVK--PPAPE----SSGGNSNSNS 328
            MDELAAQELEIHEN AG IVPTLHSF+ GC GG+VSL  GQPFDTIKVRLQ STKF GA DC R+LLA EGPLALFKGMSSPVLSAS VNAIVF+SYNETMTL+KK   ++     +PTY+QVF+AGSVAG LQ SVLTP+EL+KCRLQ  MT PRSQGL+ CIR+V++E G R FF G GPTL+RDLPAFGCYF+LYE+ KD LE  G S WLSS  AGG AGC SW +VYP+DVIKT MQTQ+G GPR GML+T  RL  T G  VFFRG S+A++RALPVNCIVFPVYEWTVEFLG +D++HSTR  VK  P AP+     +GG  N +S
Sbjct:    1 MDELAAQELEIHENKAGEIVPTLHSFVAGCAGGVVSLAVGQPFDTIKVRLQASTKFKGAIDCLRRLLATEGPLALFKGMSSPVLSASFVNAIVFTSYNETMTLIKKTDPEA---RKRPTYEQVFLAGSVAGALQCSVLTPSELIKCRLQTDMTRPRSQGLLSCIREVYREGGLRAFFNGFGPTLVRDLPAFGCYFALYEVVKDKLEGRGASPWLSSSVAGGFAGCFSWIIVYPVDVIKTVMQTQRGTGPRHGMLETGLRLWRTEGLGVFFRGASIAMVRALPVNCIVFPVYEWTVEFLGKIDSLHSTRWPVKLLPSAPDVGETGTGGLRNVDS 330          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: GAX97346.1 (Hypothetical protein PINS_005212, partial [Pythium insidiosum])

HSP 1 Score: 211.8 bits (538), Expect = 3.100e-51
Identity = 125/314 (39.81%), Postives = 174/314 (55.41%), Query Frame = 0
Query:    3 ELAAQELEIHENTAGNIVPTLHSFIGGCVGGLVSLVAGQPFDTIKVRLQT-STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS--QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT-QQGPGPRVGMLKTAT-RLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRRIV 312
            E A +  E H+N +      L  F  G VGG   ++ GQPFDT+KVRLQT ST + GA DC RQ   +EG    FKGM SP+  ++  NAI+F++Y  T+ L+          S  P    VF+AG+ +G  Q++ +TPT+L+KCRLQ+Q     S  +G   C++ ++K  G RG F G   TL R++PAF  YF  YE  K  + S G S   +   AGGLAG  SW + YP DV+K+++QT  +   P    +   T RL    G  +FF G+  A++RA PVN + F  YE T E L ++ T   T  I+
Sbjct:   32 EPAVEAYEPHKNYS-----VLVDFASGVVGGCSGIIVGQPFDTVKVRLQTHSTFYKGAIDCARQTYQHEGARGFFKGMMSPLFGSAWTNAIMFATYERTLRLIDDN-------SQTPELRSVFIAGTFSGFCQTAAVTPTDLIKCRLQVQDGHETSHYRGPADCVKHIYKRNGLRGLFLGYPVTLCREVPAFAFYFYAYEYAKRRMISEGVSDHTAMLTAGGLAGVGSWIIAYPADVLKSSIQTIAENARPEEKTIAYQTRRLYRLGGWRIFFNGLETAVVRAFPVNAVTFFCYEKTSELLKDISTARITCHIL 333          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_017875866.1 (PREDICTED: LOW QUALITY PROTEIN: mitochondrial basic amino acids transporter-like [Ceratina calcarata])

HSP 1 Score: 206.1 bits (523), Expect = 1.700e-49
Identity = 114/281 (40.57%), Postives = 160/281 (56.94%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVD 303
            F  GC+GG   ++ G P DTIKV +QT    + K+ G   CFR LLA E    L++GMSSPV   ++VNAI+F  Y ET    ++   D + +SS       F+AGS+AG  QS + +P EL K R+Q+Q ++ +  G V+C++  +K  G+RG F GLG TLLR+ P+FG YF  YE      E+   S  L    AGGLAG  SW + YP+DVIK+ +Q   G     G++    + + T G +  +RG+S  ++RA P N + F V  WT   LG  D
Sbjct:    5 FFAGCLGGCAGIMVGYPLDTIKVHMQTQDYRNPKYKGNWHCFRTLLAKESVGGLYRGMSSPVAGVAVVNAIIFGVYGET----QRRTTDPACLSSH------FIAGSLAGIAQSPICSPIELAKTRMQLQTSTTQFSGPVECLQHTYKHEGYRGVFKGLGVTLLREAPSFGVYFLTYEALTRASENKPVST-LCMLLAGGLAGTASWVISYPLDVIKSRIQA--GGNRYSGVIDCLKQSVHTEGYSCLYRGLSSTIIRAFPTNAVTFTVVTWTFRLLGQED 272          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_024226841.1 (mitochondrial basic amino acids transporter-like isoform X1 [Bombus impatiens])

HSP 1 Score: 204.9 bits (520), Expect = 3.800e-49
Identity = 122/304 (40.13%), Postives = 173/304 (56.91%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYE-ITK---DVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG--NVDTVHSTRRIVKPPAPES 319
            F  GCVGG   +V G P DTIKV +QT    + K+ G  DCFR LLA E    L++GMSSP+   +LVNA++F  Y +T    +K   D +S++S       F AG++AG +QS + +P EL K R+Q+Q ++ R  G +QC++  +   G+RG F GL  TLLR+ P+FG YF +YE +TK   +V  S  R L      AGGLAG  SW + YP+DVIK+ +Q     G R  G++    + ++T G +  +RG+S  ++RA P N + F    WT   LG  NV+T     +I      ES
Sbjct:    5 FFAGCVGGCAGIVVGYPLDTIKVHMQTQDYRNPKYKGNWDCFRTLLAKESVAGLYRGMSSPLAGVALVNAVIFGVYGQT----QKYIPDPASLTS------YFAAGALAGIVQSPICSPIELAKTRMQLQASAARFSGPLQCLKHAYTREGYRGVFKGLNVTLLREAPSFGVYFLVYEALTKMPDNVPVSTPRML-----LAGGLAGTASWVISYPLDVIKSRIQAD---GNRYAGLIDCVRQSVKTEGYSCLYRGLSSTIVRAFPTNAVTFTAVMWTFRLLGRENVETKKEEEQISMESIGES 290          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: ETO76643.1 (hypothetical protein F444_07981 [Phytophthora parasitica P1976])

HSP 1 Score: 204.9 bits (520), Expect = 3.800e-49
Identity = 119/278 (42.81%), Postives = 159/278 (57.19%), Query Frame = 0
Query:   29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT---QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGN 301
            G VGG+  +V GQPFDT+KVRLQT +K + GA DC RQ + +EG    FKGM+SPV+ ++  NA++F+ Y  T+ ++   A         PT   VF AG+V G  Q+  L P EL+KCRLQ+Q    S + +G + CIR +FK RG  G F G   TL R++P+F  YF LYE TK  +     S   S   AGG+AG  SW V YP DVIK+ +QT   +  PG    +   A +L    G  +FF G+  A LRA P N + F  YE + + L N
Sbjct:   17 GTVGGIAGVVVGQPFDTVKVRLQTYSKYYNGAFDCARQTMKHEGFSGFFKGMTSPVVGSAATNAVMFAVYERTLKMIDDNA-------ENPTLKSVFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSSQYRGPMDCIRHIFKARGTPGLFLGFTCTLWREVPSFAVYFWLYEYTKRTMIDGNISPTTSMLTAGGVAGVASWVVSYPFDVIKSAIQTLPVKHKPGEH-KIAYQARQLYRIGGWRIFFSGLGTACLRAFPSNAVTFYAYEKSSDLLKN 286          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_008904659.1 (hypothetical protein PPTG_10909 [Phytophthora parasitica INRA-310] >ETI47955.1 hypothetical protein F443_07934 [Phytophthora parasitica P1569] >ETK87854.1 hypothetical protein L915_07764 [Phytophthora parasitica] >ETL41273.1 hypothetical protein L916_07694 [Phytophthora parasitica] >ETL94429.1 hypothetical protein L917_07579 [Phytophthora parasitica] >ETM47661.1 hypothetical protein L914_07658 [Phytophthora parasitica] >ETN10222.1 hypothetical protein PPTG_10909 [Phytophthora parasitica INRA-310] >ETP17725.1 hypothetical protein F441_07907 [Phytophthora parasitica CJ01A1] >ETP45742.1 hypothetical protein F442_07875 [Phytophthora parasitica P10297] >KUG00570.1 Mitochondrial Carrier (MC) Family [Phytophthora nicotianae])

HSP 1 Score: 204.5 bits (519), Expect = 5.000e-49
Identity = 119/278 (42.81%), Postives = 158/278 (56.83%), Query Frame = 0
Query:   29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT---QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGN 301
            G VGG+  +V GQPFDT+KVRLQT +K + GA DC RQ + +EG    FKGM+SPV+ ++  NA++F+ Y  T+ ++   A         PT   VF AG+V G  Q+  L P EL+KCRLQ+Q    S + +G + CIR +FK RG  G F G   TL R++P+F  YF LYE TK  +     S   S   AGG+AG  SW V YP DVIK+ +QT      PG    +   A +L    G  +FF G+  A LRA P N + F  YE + + L N
Sbjct:   17 GTVGGIAGVVVGQPFDTVKVRLQTYSKYYNGAFDCARQTMKHEGFSGFFKGMTSPVVGSAATNAVMFAVYERTLKMIDDNA-------ENPTLKSVFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSSQYRGPMDCIRHIFKARGTPGLFLGFTCTLWREVPSFAVYFWLYEYTKRTMIDGNISPTTSMLTAGGVAGVASWVVSYPFDVIKSAIQTLPVNHKPGEH-KIAYQARQLYRIGGWRIFFSGLGTACLRAFPSNAVTFYAYEKSSDLLKN 286          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_003397987.1 (mitochondrial basic amino acids transporter [Bombus terrestris])

HSP 1 Score: 203.8 bits (517), Expect = 8.600e-49
Identity = 121/304 (39.80%), Postives = 173/304 (56.91%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYE-ITK---DVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG--NVDTVHSTRRIVKPPAPES 319
            F  GCVGG   +V G P DTIKV +QT    + K+ G   CFR LLA E    L++GMSSP+   +LVNA++F  Y +T    +K   D +S++S       F AG++AG +QS + +P EL K R+Q+Q ++ R  G +QC++  +   G+RG F GL  TLLR+ P+FG YF +YE +TK   +V  S  R L      AGGLAG  SW + YP+DVIK+ +Q     G R  G++    + ++T G +  +RG+S  ++RA P N + F    WT   LG  NV+T    ++I      ES
Sbjct:    5 FFAGCVGGCAGIVVGYPLDTIKVHMQTQDYRNPKYKGNWHCFRTLLAKESVAGLYRGMSSPLAGVALVNAVIFGVYGQT----QKYIPDPASLTS------YFAAGALAGIVQSPICSPIELAKTRMQLQTSAARFSGPLQCLKHAYTHEGYRGVFKGLSVTLLREAPSFGVYFLVYEALTKMPDNVPVSTSRML-----LAGGLAGTASWVISYPLDVIKSRIQAD---GNRYAGLIDCLRQSVKTEGYSCLYRGLSSTIVRAFPTNAVTFTAVTWTFRLLGRENVETKKEEKQISMESIGES 290          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_008611812.1 (hypothetical protein SDRG_07738 [Saprolegnia diclina VS20] >EQC34940.1 hypothetical protein SDRG_07738 [Saprolegnia diclina VS20])

HSP 1 Score: 203.8 bits (517), Expect = 8.600e-49
Identity = 119/279 (42.65%), Postives = 158/279 (56.63%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQTSTKF-AGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ---MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRV--GMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299
            F  GCVGG   ++ GQPFDTIKVRLQT   F +G   C R    +EG    FKG++SP+  +   +AIVF +Y   +  ++   A     S +P    VF AGS+AG LQS  L PT+L+KC+LQ Q     +P  +G ++C++ ++   G RG F G  PT+LRD  +FG YF +YE  K  L         S   AGG AG +SW +VYPIDV+K+ +QT  G    +   M     RLL+  G A F +G+   LLRA PVN + F VYE TV FL
Sbjct:   14 FAAGCVGGGSGIIVGQPFDTIKVRLQTHGAFYSGPVACARHTWQHEGVRGFFKGLTSPLFGSLWTSAIVFGAYGSALRQLEAGVA-----SPEPRLSSVFTAGSIAGLLQSIALCPTDLIKCQLQAQDGFTKTPSFRGPIECVQHIYGRFGVRGLFLGFWPTVLRDSYSFGVYFYVYEALKRSLIEKRVDDTASMLVAGGAAGVVSWGLVYPIDVVKSCIQTLPGHASSLEKSMRYQVRRLLQEQGYAPFTKGLGTTLLRAFPVNAVTFFVYEHTVLFL 287          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_015433086.1 (PREDICTED: mitochondrial basic amino acids transporter-like [Dufourea novaeangliae])

HSP 1 Score: 203.8 bits (517), Expect = 8.600e-49
Identity = 119/291 (40.89%), Postives = 165/291 (56.70%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTS-PRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYE-ITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRR 310
            F  GCVGG   +V G P DTIKV +QT    + ++ G  DCFR + A E    L++GM+SP+   ++VNAI+F  Y +T    ++   D  S++S       FVAG+VAG  QS + +P ELVK R+Q+Q  S  R  G +QC+   +K  G+RG F GLG TLLR+ P+FG YF  YE ITK        + W+    AGG+AG  SWA+ YPIDVIK+ +Q     G R  GM+    R + T G +  ++G+S  +LRA P N + F V  WT    G      +++R
Sbjct:    5 FFAGCVGGCAGIVVGYPLDTIKVHMQTQDYRNPRYKGNWDCFRAIFAKESVGGLYRGMTSPMAGVAVVNAIIFGVYGQT----QRHIPDPDSLTSH------FVAGTVAGIAQSPICSPMELVKTRIQLQANSTSRFTGPLQCLAHTYKHEGYRGMFKGLGITLLREAPSFGVYFFTYEAITKTSETEPVSTPWM--LLAGGVAGTASWALTYPIDVIKSRIQAN---GDRYTGMIDCFRRSVRTEGYSCLYKGLSSTILRAFPTNAVTFTVVTWTFRMFGRDQARETSKR 280          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: KZC11047.1 (Mitochondrial carnitine/acylcarnitine carrier protein CACL, partial [Dufourea novaeangliae])

HSP 1 Score: 203.8 bits (517), Expect = 8.600e-49
Identity = 119/291 (40.89%), Postives = 165/291 (56.70%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTS-PRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYE-ITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRR 310
            F  GCVGG   +V G P DTIKV +QT    + ++ G  DCFR + A E    L++GM+SP+   ++VNAI+F  Y +T    ++   D  S++S       FVAG+VAG  QS + +P ELVK R+Q+Q  S  R  G +QC+   +K  G+RG F GLG TLLR+ P+FG YF  YE ITK        + W+    AGG+AG  SWA+ YPIDVIK+ +Q     G R  GM+    R + T G +  ++G+S  +LRA P N + F V  WT    G      +++R
Sbjct:    6 FFAGCVGGCAGIVVGYPLDTIKVHMQTQDYRNPRYKGNWDCFRAIFAKESVGGLYRGMTSPMAGVAVVNAIIFGVYGQT----QRHIPDPDSLTSH------FVAGTVAGIAQSPICSPMELVKTRIQLQANSTSRFTGPLQCLAHTYKHEGYRGMFKGLGITLLREAPSFGVYFFTYEAITKTSETEPVSTPWM--LLAGGVAGTASWALTYPIDVIKSRIQAN---GDRYTGMIDCFRRSVRTEGYSCLYKGLSSTILRAFPTNAVTFTVVTWTFRMFGRDQARETSKR 281          
The following BLAST results are available for this feature:
BLAST of NO12G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25764.13.500e-12770.27solute carrier family 25 member 45 [Nannochloropsi... [more]
GAX97346.13.100e-5139.81Hypothetical protein PINS_005212, partial [Pythium... [more]
XP_017875866.11.700e-4940.57PREDICTED: LOW QUALITY PROTEIN: mitochondrial basi... [more]
XP_024226841.13.800e-4940.13mitochondrial basic amino acids transporter-like i... [more]
ETO76643.13.800e-4942.81hypothetical protein F444_07981 [Phytophthora para... [more]
XP_008904659.15.000e-4942.81hypothetical protein PPTG_10909 [Phytophthora para... [more]
XP_003397987.18.600e-4939.80mitochondrial basic amino acids transporter [Bombu... [more]
XP_008611812.18.600e-4942.65hypothetical protein SDRG_07738 [Saprolegnia dicli... [more]
XP_015433086.18.600e-4940.89PREDICTED: mitochondrial basic amino acids transpo... [more]
KZC11047.18.600e-4940.89Mitochondrial carnitine/acylcarnitine carrier prot... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010216NSK010216Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02880.1NO12G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543153gene_5460Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100168g3gene4754Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02880.1NO12G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02880 ID=NO12G02880|Name=NO12G02880|organism=Nannochloropsis oceanica|type=gene|length=999bp
ATGGACGAGCTCGCTGCGCAGGAGCTCGAGATCCATGAGAATACGGCAGG
GAACATTGTCCCGACTTTGCACTCGTTTATTGGTGGATGCGTAGGTGGCC
TAGTCTCGCTTGTCGCTGGACAGCCGTTTGACACAATCAAGGTCCGCCTT
CAAACTTCAACGAAATTCGCCGGCGCCGGGGACTGTTTTCGGCAGCTGCT
TGCCAACGAAGGCCCTTTGGCACTGTTCAAAGGCATGTCCTCGCCTGTTC
TCTCCGCTTCCCTCGTGAACGCCATCGTTTTCTCCTCCTACAACGAAACC
ATGACCCTCATGAAAAAAGAAGCGGCGGACTCCAGCAGCATCAGCAGCAA
ACCCACCTACGACCAAGTCTTTGTCGCTGGCTCCGTGGCTGGCGGGCTGC
AGTCCTCAGTTCTCACCCCCACAGAGCTGGTCAAATGCCGCTTGCAGATA
CAGATGACTTCTCCCCGATCTCAGGGCTTGGTGCAATGTATTCGGGACGT
CTTTAAGGAAAGGGGTTTCCGGGGTTTTTTCGCGGGATTAGGCCCTACTT
TGCTGCGGGATTTGCCGGCGTTCGGCTGTTATTTCTCACTGTATGAAATC
ACAAAGGACGTGTTGGAGAGCAATGGGCGATCGTTGTGGTTGAGTTCATG
TGCGGCGGGGGGATTGGCCGGGTGCCTGTCGTGGGCCGTGGTCTACCCGA
TCGACGTCATAAAAACCACCATGCAGACACAACAAGGGCCAGGGCCTCGG
GTGGGCATGCTCAAGACAGCGACGAGGCTCCTCGAGACAACGGGGCCGGC
AGTATTTTTCAGGGGTATGTCGGTGGCGCTTCTGAGGGCACTGCCGGTAA
ATTGTATTGTCTTTCCCGTGTACGAATGGACGGTGGAGTTTTTGGGAAAT
GTGGATACGGTGCATAGCACTAGAAGGATTGTCAAGCCGCCGGCACCGGA
GAGCAGCGGCGGCAATAGTAATAGTAATAGCGGAATTCCAGCGACCTGA
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protein sequence of NO12G02880.1

>NO12G02880.1-protein ID=NO12G02880.1-protein|Name=NO12G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MDELAAQELEIHENTAGNIVPTLHSFIGGCVGGLVSLVAGQPFDTIKVRL
QTSTKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNET
MTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQI
QMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEI
TKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR
VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGN
VDTVHSTRRIVKPPAPESSGGNSNSNSGIPAT*
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Synonyms
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