NO12G02850, NO12G02850 (gene) Nannochloropsis oceanica

Overview
NameNO12G02850
Unique NameNO12G02850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2959
Alignment locationchr12:793780..796738 -

Link to JBrowse

Properties
Property NameValue
DescriptionPre-rRNA-processing protein esf1 with NUC153 domain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:793780..796738 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012580NUC153
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Homology
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_009837054.1 (hypothetical protein H257_11736 [Aphanomyces astaci] >ETV73628.1 hypothetical protein H257_11736 [Aphanomyces astaci])

HSP 1 Score: 175.3 bits (443), Expect = 8.200e-40
Identity = 165/496 (33.27%), Postives = 229/496 (46.17%), Query Frame = 0
Query:    1 MAKKKDTARQAMPSSRRTEEVPVMEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEISDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            M+ KK +A  A P+S       V+ DPRF  +H+ P F R  K   K ++D RFKAVLTD +F++V  GK DK G++++K++   +D K FY V+GE+  D+       G+   K+  T   R                                                                            R+ YLN+ ARGE                     XXXXXXXXXXXXXXXXXXXXXXX          IP+G+ T R AIMNCDW  ++A+D+L +  SF P  G +  V VY SD+G  +M ++ K GP  +  +     G    E                              E +R +E+ KL+YY+AVA  +SV+ AS ++D  D LE+E SS+ +D+RFVP DV F       + S  ++P TY P +F T ALQ T++ECTW+ GDG R  KLT+   W ++ +DD  AY+
Sbjct:    1 MSSKKQSA--AAPTS-------VVTDPRFIKVHNDPRFARNSKKKNKVQLDTRFKAVLTDKKFQSVQ-GKYDKYGRRVEKQD---NDMKKFYNVEGEDSDDEDT-----GEVASKKPSTAAER----------------------------------------------------------------------------RIAYLNKKARGE---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLGDETKRFAIMNCDWSRMRAVDLLALFQSFLPAAGILHSVVVYPSDFGLARMADEQKFGPQGLWADKPEKSG---DEXXXXXXXXXXEADPLGIKNSAADADDGFDKEKLRRHELDKLKYYYAVATFNSVSAASAVFDACDGLEYETSSNTLDLRFVPNDVTFNN---PPKESATAVPDTYTPSIFATLALQNTELECTWDEGDGARVDKLTRPANWKDLKDDDFAAYV 375          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_009837055.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV73629.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 175.3 bits (443), Expect = 8.200e-40
Identity = 165/496 (33.27%), Postives = 229/496 (46.17%), Query Frame = 0
Query:    1 MAKKKDTARQAMPSSRRTEEVPVMEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEISDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            M+ KK +A  A P+S       V+ DPRF  +H+ P F R  K   K ++D RFKAVLTD +F++V  GK DK G++++K++   +D K FY V+GE+  D+       G+   K+  T   R                                                                            R+ YLN+ ARGE                     XXXXXXXXXXXXXXXXXXXXXXX          IP+G+ T R AIMNCDW  ++A+D+L +  SF P  G +  V VY SD+G  +M ++ K GP  +  +     G    E                              E +R +E+ KL+YY+AVA  +SV+ AS ++D  D LE+E SS+ +D+RFVP DV F       + S  ++P TY P +F T ALQ T++ECTW+ GDG R  KLT+   W ++ +DD  AY+
Sbjct:    1 MSSKKQSA--AAPTS-------VVTDPRFIKVHNDPRFARNSKKKNKVQLDTRFKAVLTDKKFQSVQ-GKYDKYGRRVEKQD---NDMKKFYNVEGEDSDDEDT-----GEVASKKPSTAAER----------------------------------------------------------------------------RIAYLNKKARGE---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLGDETKRFAIMNCDWSRMRAVDLLALFQSFLPAAGILHSVVVYPSDFGLARMADEQKFGPQGLWADKPEKSG---DEXXXXXXXXXXEADPLGIKNSAADADDGFDKEKLRRHELDKLKYYYAVATFNSVSAASAVFDACDGLEYETSSNTLDLRFVPNDVTFNN---PPKESATAVPDTYTPSIFATLALQNTELECTWDEGDGARVDKLTRPANWKDLKDDDFAAYV 375          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_011395479.1 (Pre-rRNA-processing protein esf1 [Auxenochlorella protothecoides] >KFM22623.1 Pre-rRNA-processing protein esf1 [Auxenochlorella protothecoides])

HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39
Identity = 98/222 (44.14%), Postives = 136/222 (61.26%), Query Frame = 0
Query:  270 EATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDD 492
            +AT R+A+++ DWEH++A+DIL +L SF P +G V+RV VY SDYG E+M E+A  GP  +   G  G+ +++Q   EED+E    G                    +RAYE+ +LRYY+AV ECD   TAS+LY+E D +EF  ++ + D+RFVP    FEGR+VRD A    LP+ Y PP F TKALQ T V+ TW+A D  R++ L +     E+ EDD
Sbjct:  170 DATPRLAVLDLDWEHVRAVDILAVLRSFCPPKGGVQRVTVYPSDYGLERMAEEATAGPQGIWDAGADGK-QEDQGGSEEDEEGPSAG-----------NDAEIERRRLRAYELSRLRYYYAVVECDGAATASRLYEECDGMEFLKTACKFDLRFVPEGQSFEGRKVRDTAE--ELPIDYAPPNFQTKALQHTNVDLTWDAVDSGRKQALGRRVTDEEIREDD 377          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_005849562.1 (hypothetical protein CHLNCDRAFT_57252 [Chlorella variabilis] >EFN57460.1 hypothetical protein CHLNCDRAFT_57252 [Chlorella variabilis])

HSP 1 Score: 174.5 bits (441), Expect = 1.400e-39
Identity = 98/235 (41.70%), Postives = 137/235 (58.30%), Query Frame = 0
Query:  263 EAPIPM-GEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            E PI M  +AT R+A ++ DWEH++A+DIL +L SF P  G + RV V+ SDYG E+M ++A  GP  + K  G  + R++    E+D E E                       +R YE  KLRYY+A+  CDS  TA++LY+E D +E   ++ + D+RFVP +  FEGR+VRDEA+   +P  Y PP F  +ALQ T V+ TW+ GD  R+R LT+     E+ EDD  AYL
Sbjct:  236 EEPILMQPDATPRLAAVDLDWEHVRAVDILAVLRSFVPQGGAIRRVVVHPSDYGLERMAQEAVMGPQGIFKPVGDSQKRRQVVGVEDDGESEGGA---GPSSSESDEGGQVDQRRLRLYERSKLRYYYAIITCDSAATANRLYEECDGMELMKTACKFDLRFVPEEQSFEGRQVRDEAT--DVPTDYAPPTFQARALQHTNVQLTWDTGDDGRKRALTRRVTAEELKEDDFKAYL 465          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: OQR98341.1 (pre-rRNA-processing protein ESF1 [Thraustotheca clavata])

HSP 1 Score: 169.1 bits (427), Expect = 5.900e-38
Identity = 93/231 (40.26%), Postives = 133/231 (57.58%), Query Frame = 0
Query:  266 IPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            IPMGE T RIA+MNCDW  ++A+D+  +  SF P  G V  V +Y SD+G EKM E+ K GP  +  +    E ++             X XX                E +R +E+QKL+YY+AVA  +SV  AS ++++ D LE+E S++ +D+RFVP DVEF+      + S  S+P +Y P +F T ALQ T++E TWEA DGER  +LT+   W E+ +DD   Y+
Sbjct:  140 IPMGEETKRIAVMNCDWSRMRAVDLFALFQSFVPASGAVHDVTIYPSDFGLEKMAEEEKYGPRGIFSD----EKKEXXXXXXXXXXXXXXXXXPLGVKKSASTEEEFDKEKLRQFELQKLKYYYAVATFNSVAAASAVFEQCDGLEYETSANTLDLRFVPDDVEFKNTL---KESATSVPESYTPAIFSTLALQNTEIELTWEADDGERNERLTRIANWKELHDDDFAQYV 363          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: CCI47423.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 168.7 bits (426), Expect = 7.700e-38
Identity = 139/520 (26.73%), Postives = 194/520 (37.31%), Query Frame = 0
Query:   19 EEVPVMEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEISDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAH------------------------------------------EEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            +++ V+ D RFS +H  P F +  +   K  ID RFK+VLT D F++   G  DK G+ ++K E   +D K FY +D EE                                                                                                     RL+YL ++ARGEI                                            E  K  E  I MGE T R AIMNCDW  L+A+DI  +  SF P  G V  V +Y SD+G +KM+E+A+ GP  +  E                                                       ++  + E+ G                  E +R YE+QKLRYY+A+ +CDSV TA  + D+ D +E+E SS+ +DVRFVP D+EF       + S  S+P  Y+P +F TK LQQT VE TWE  D +R  KLT +  W+E++++D   YL
Sbjct:    5 KKLDVISDNRFSKVHYDPRFIKTSRKREKIAIDARFKSVLTSDTFQSTH-GSCDKHGRPIQKNESQTNDMKKFYRIDDEE-----------------------------------------------------------------------------------------------------RLDYLTQMARGEID---------------------KDEESSSSESELESDAMDLANYEDEKQVE-DIAMGEITKRFAIMNCDWTRLRAVDIFALCQSFAPATGSVSDVTIYPSDFGVQKMKEEARYGPRELTGESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGVQQSAQSEELG--------------GIDQEKLRQYELQKLRYYYAIVKCDSVKTAKIIADQCDQMEYETSSNVLDVRFVPNDMEFTN---PPKESCQSIPDAYKPSLFATKVLQQTDVESTWEQDDPDRIEKLTSWSNWNELEDNDFSTYL 383          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_024575073.1 (pre-rrna processing protein esf1 [Plasmopara halstedii] >CEG38704.1 pre-rrna processing protein esf1 [Plasmopara halstedii])

HSP 1 Score: 166.0 bits (419), Expect = 5.000e-37
Identity = 152/515 (29.51%), Postives = 219/515 (42.52%), Query Frame = 0
Query:   23 VMEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEI-SDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGP--------------------GEGRKEQEAHEEDKECEDXG--------------------XXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            ++ED RF  +H+ P F R  K   K +ID RF A L D+RF++V  GK DK G+ ++K++    +   FY +D E+   +    +  G +++ E  +    K  E+                                                                       RL+YLNR+ARGE+ SD+XXXXXXXXXXXXX                               K +E  IPMGE T R A++NCDW  ++A+D+  +  SF P  G V+ V++Y SDYG EKM+E+ + GP  +  +                         G+K     E D     X                                       E +R YE+QKLRYY+A+  CDSV TAS ++D+ D LE+E SS+ +D+R+VP D  F       + +  S+P  Y+P +F T ALQQT ++ TWE  D +R   LT+   W +  +DD  AYL
Sbjct:    1 MVEDQRFRKVHNDPRFARNSKRKSKLQIDQRFAAALKDERFQSVQ-GKYDKYGRCLEKKD---SELNKFYHLDEEDDEVKLKTPVISGSDDDNENPSTTVAKTNEK---------------------------------------------------------------------LSRLDYLNRMARGELESDSXXXXXXXXXXXXXQVYD---------------------------KNEEEEIPMGEETKRFAVLNCDWTRIRAVDLFALCQSFAPSTGTVQNVKIYPSDYGLEKMKEEEQHGPQGLWDDKQEKSRECTIEKIPERAENAKMNATGKKGTNLAESDXXXXXXXXXXXXXXXXXXXXXXXXXXPLGVKKSVTLEEKSEGFDSEKLRKYELQKLRYYYAIVTCDSVKTASTIFDQCDQLEYETSSNVLDLRYVPDDTTFTN---TPKDTCDSVPDQYKPAIFATLALQQTDIKLTWEEDDDQRLELLTRPGDWKDAQDDDFKAYL 412          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: OLL24346.1 (Pre-rRNA-processing protein esf1 [Neolecta irregularis DAH-3])

HSP 1 Score: 162.5 bits (410), Expect = 5.500e-36
Identity = 135/488 (27.66%), Postives = 206/488 (42.21%), Query Frame = 0
Query:   15 SRRTEEVPVMEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEISDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKL-----DEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKM-EEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            +R   +VPV +DPRFS +HS P F +  + D KF +D RFK +L +  F   DG KVD+ G+K++K +                 G    +K  + D++E+E      R +G      E   D                                                                         EI +A                                        +E+R+L     DE  IP+G+A+ R A++N DW+++K++D+L +L SFKP  GK+ RV+++ S++GK++M +ED +  P  + K+    +   E  A  EDKE                       + +R Y++++LRYY+AV ECD+  TA  +YD  D  E+ENS++  D+RF+P D EF   E+RD++S   LP  Y P  FVT ALQ TKV+ TW+  D +R     +     E  + DL  YL
Sbjct:   11 TRDAAKVPVTDDPRFSVVHSDPRFAKPKRKDIKFAVDDRFKHMLREKDF--ADGPKVDRYGRKIEKNK-----------------GATEIRKFYRMDDDEEEPVYDPARGEGLLASGDEVSSDEELD--------------------------------------------------------------------AEIEEA----------------------------------------LENRELAEPFADECQIPLGDASRRFAVVNLDWDNVKSVDLLAVLQSFKPVNGKIIRVQIFPSEFGKDRMAQEDQQGPPREIFKDLKDEDYGSENTAEIEDKE------ITIKDLIEEGNDEEYDFQKLRKYQLERLRYYYAVVECDNEITAKHIYDACDGAEYENSANFFDIRFIPDDTEFSESEIRDQSS--HLPQDYSPTEFVTDALQHTKVKLTWDNDDPQRVNITKKAFSQQEQADMDLRDYL 363          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: GAX82620.1 (hypothetical protein CEUSTIGMA_g10046.t1 [Chlamydomonas eustigma])

HSP 1 Score: 161.4 bits (407), Expect = 1.200e-35
Identity = 176/481 (36.59%), Postives = 229/481 (47.61%), Query Frame = 0
Query:   24 MEDPRFSSMHSAPTFQRIPKDDRKFKIDPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGGDQSAKKMGKGDEEEKEGFTRR--------GRKKGERKQSKEAQPDPRFQLRPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLEYLNRLARGEISDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            M+D RF+SMH  P F R PK +   +ID RF  + +D  F++     VDKRG+K+K+ ++  +D K +Y +  E    Q AKK    D++  E    +        G K  + K S                                                        XXXXXXXXXXX  L+   R ARG +   XXXXXXXXXXXXXXXXXXXXXXXXX                      E  IP+ + T RIAI++ DW+H+KA+DIL +L SF P    V RV VY SDYG ++M E+   GP  + K     +G+            ED                    + +  YE  KLRYY+A+ EC +V  AS +Y E D LEFE S+ + D+RFVP D  FEGR+VRD AS  S+P  YEPPV    +LQ T  + TW+A D  R+R L +     E+ E D  AYL
Sbjct:   37 MQDARFASMHKDPRFSRFPKKNSTVEIDKRFSGMFSDPEFQSKSA--VDKRGRKVKQGKR-SEDLKRYYHLKDEAEWKQDAKKGNVDDQDVDEVHDEKAVLSKPVHGTKSKQNKSSAS----------------------------------------------KAIASFVDXXXXXXXXXXXXXLQRFLR-ARGMLDVXXXXXXXXXXXXXXXXXXXXXXXXXXEGEPGAELSVKEWGVGAMAANPEEKIPLMDETKRIAIVDLDWDHVKAVDILAVLRSFAPTGADVVRVTVYPSDYGLQRMAEEVVAGPKHIFKSSEAKKGKSAGNKRPASDSEED--------------GDEVDKKRLAMYEKSKLRYYYAIVECRTVVAASHIYAECDGLEFERSACKFDLRFVPDDQSFEGRQVRDSAS--SVPTEYEPPVIFNLSLQHTDPKLTWDADDEGRKRVLHKKMTEEEIKEADFQAYL 451          
BLAST of NO12G02850 vs. NCBI_GenBank
Match: XP_007510278.1 (predicted protein [Bathycoccus prasinos] >CCO18623.1 predicted protein [Bathycoccus prasinos])

HSP 1 Score: 159.5 bits (402), Expect = 4.700e-35
Identity = 90/235 (38.30%), Postives = 134/235 (57.02%), Query Frame = 0
Query:  263 EAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPGEGKVERVRVYVSDYGKEKMEEDAKRGP-GFMLKEGGPGEGRKEQEAHEEDKECEDXGXXXXXXXXXXXXXXXXXXEMMRAYEVQKLRYYFAVAECDSVNTASKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEPPVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYL 497
            E+ +P  +AT R+A++NC+W+ ++A+DIL IL SF P  G+V RV VY SD+G E+M+E+   GP G + K      G  E     ++K+                       E +R YE  +L+YY+A+ ECDSV TA  +Y++ D LEFE SS+ +D+R+VP D +F  REVRD A+    P  YEPP F  KAL+   V+ +W+  D  R++   +     ++ +DD  AYL
Sbjct:  214 ESSVPEQDATKRLALVNCEWQQIRAVDILTILRSFCPSSGEVNRVTVYPSDFGLERMKEENVIGPMGAVAKIKKSKYGGSELSQKRKNKK-------SLSEFEFGKEGKEIDNEQLRQYERDRLKYYYAIIECDSVKTAKSVYEQCDGLEFERSSALLDLRYVPKDQDFSKREVRDVAT--DTPEDYEPPEFEVKALRNATVKLSWDDADPARKKTFGRKITEDKLKDDDFNAYL 439          
The following BLAST results are available for this feature:
BLAST of NO12G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009837054.18.200e-4033.27hypothetical protein H257_11736 [Aphanomyces astac... [more]
XP_009837055.18.200e-4033.27hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_011395479.11.100e-3944.14Pre-rRNA-processing protein esf1 [Auxenochlorella ... [more]
XP_005849562.11.400e-3941.70hypothetical protein CHLNCDRAFT_57252 [Chlorella v... [more]
OQR98341.15.900e-3840.26pre-rRNA-processing protein ESF1 [Thraustotheca cl... [more]
CCI47423.17.700e-3826.73unnamed protein product [Albugo candida][more]
XP_024575073.15.000e-3729.51pre-rrna processing protein esf1 [Plasmopara halst... [more]
OLL24346.15.500e-3627.66Pre-rRNA-processing protein esf1 [Neolecta irregul... [more]
GAX82620.11.200e-3536.59hypothetical protein CEUSTIGMA_g10046.t1 [Chlamydo... [more]
XP_007510278.14.700e-3538.30predicted protein [Bathycoccus prasinos] >CCO18623... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010220NSK010220Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02850.1NO12G02850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671509gene_5456Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02850.1NO12G02850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02850 ID=NO12G02850|Name=NO12G02850|organism=Nannochloropsis oceanica|type=gene|length=2959bp
AAGAAAAGCACAGGCAGCAAGCCACGCACCCACGCACCACCGCTAAATCA
GCTACAGACGCTCGCATATGGCCAAGAAGAAAGACACGGCCAGACAGGCC
ATGCCTTCCTCCCGCCGCACTGAGGAGGTGCCCGTCATGGAGGACCCTCG
CTTCAGCTCTATGCACTCGGCGCCGgtacgtttcttgataatcttgtctc
ccttcccaacttaacttttcccagccgacctccccaccccccctcctctt
tttcctccactcatcctcccccaaacccccccgtaataccatttcattag
ACCTTCCAGCGCATTCCTAAGGACGATCGTAAATTCAAGATTGACCCCCG
GTTCAAAGCCGTGCTGACAGACGATCGTTTTCGAGCAGTAGATGGAGGAA
AGGTGGACAAGCGGGGTAAAAAAATGAAGAAACGCGAAAAGGTGGTGGAT
GACTTCAAGGCTTTCTATACCGTTGATGGAGAGGAGGGGGGCGACCAAAG
TGCGAAGAAGATGGGAAAGGGAGATGAGGAGGAGAAAGAGGGGTTCACTC
GAAGAGGAAGGAAGAAGGGGGAAAGAAAGCAATCTAAGGAGGCACAGCCA
GATCCGCGTTTCCAGTTGCGCCCGGAGCAGCAAGACGACGAGAAAGAGGA
GGAAGAGAAAGATAAAGAGAAAAAGGAGGAAGAAGAGGAGGAGGAGGAAG
AGGAGTGCGGAGACGATGGAGCTGAGGGGAAGAAGAAGGACGATAAAATG
AAAAAGAAGTCCTCTCCTTCCCACAACGAGGACGAAGACCGACTGGAATA
CCTGAATCGCCTCGCCCGCGGAGAGATCAGTGATGCCTCCACATCGTCCT
CCACTGGCACCTCCTCCTCTTCCTCTTCCTCTGAAAATGACTCCTCGGGT
TTCGAAAGCGAAGACGAAGAACCCCAAGCTGACGACGACGATGACGACGA
TGATGTCATCGAATCGAGGAAGCTCGACGAGGCGCCCATTCCTATGGGTG
AAGCCACCTCCCGTATAGCCATCATGAACTGTGACTGGGAGCATTTAAAG
GCCTTGGATATTTTGGGCATTCTGCTATCGTTTAAGCCGGGGGAGGGGAA
GGTGGAGAGGGTCCGAGTGTATGTTTCGGATTACGGGAAGGAGAAGATGG
AGGAGGATGCAAAGAGGGGACCCGGGTTTATGCTGAAGGAGGGAGGCCCG
GGGGAAGGAAGGAAGGAGCAGGAGGCACACGAGGAGGACAAGGAGTGTGA
GGATGAAGGGAGTGTGGGTAGTGAGGAGGAGGACGAGGAGGAGGGAGGGG
AGGAGGTGAACCAGGAAATGATGCGTGCGTATGAAGTCCAGAAGTTGAGG
TATTATTTCGCGGTGGCGGAATGTGATAGCGTCAATACGGCTTCGAAGCT
GTACGATGAGGTGGACAGCCTTGAATTTGAAAATTCAAGTTCGCAGATTG
ACGTCCGATTCGTTCCTCCCGATGTGGAGTTTGAGGGGAGGGAGGTGAGA
GATGAGGCAAGTGGGGGCTCTTTACCTGTCACGTACGAGCCACCCGTGTT
TGTGACCAAGGCGCTGCAGCAGACTAAAGTGGAGTGCACATGGGAGGCGG
GGGATGGAGAGAGAGAGCGGAAGTTAACTCAGTACCATAAGTGGCATGAG
ATGGACGAGGATGACTTGGGCGCGTATTTGGCCAGTAGTAGTAGTGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GAGGGAAAAAGCAGAAGGGACGAAAAGATGAACGTAGGAAGAAGTTGAGA
AATTTGTTGTTGGGCGGATTGGTGGGGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGAGGGAGGGAGGGAGGGGGGTTCAAGGAAGTGACGTACG
TGCCGGGGAAGCTGGCCAAGAGTAAGTGGGAGAAGAGGAAGAAAGAGGAG
GAGGAAGAGAAGGAGAGGGAAGAGGAAACGCCGTTTGAGGCGTTGTTAAG
GAAGAGGAAGGAGAAGAGAAAGGAGAAGAGGGCGATGAAGAAGGAGGAAA
AGCGAGGGGGAAGAGGAGGGAGGGGGGATGAAGGGGAGGGGGGAGGAGGG
GAGGAGGAGGAAGAGGAGGACGACTTCTTTGCCGAAGGTATCCGCGATGG
GAAGAACGATAAGAAGAATAAGAGGAATAAGAAGGGAAAGCGCGCCGAGG
ACGAGAAGGAAGAGGACGAAGAGGACGAAGAGGAGGAGGGTCCTGCCGCA
AGGAAGCGAAAGGAGGAAGAGTTGGAGTTGTTGTTTGCAGGGGAGGATAA
GGAGGAGCAACTGCGTGATTTTGACATGCGGGCGTTGGAGAGGAAGGAGA
GATTAAAGGGGAAGAAGCTCAAGGGGAAAAGGAAGAGGAAGGAGGAGAAG
AGGGGGGAGGTCATGCCCGGGGGGGGCTTTGAGGTGGACGTGCAGGATGA
GAGGTTCAGTGCTTTGTTTGAAGGAGATGCGAGGTACGGGATTGATAGGA
CGAATAAGGAGTATAAGCAAACGGAGGGCATGGCGGTCATTATGGGAGAG
CAGAGCAAAAGACGGAGAATGAAGGAGAGAGGGGGGGGGGCAGAGGAGAG
GAGGAGGGCGGAGGTGGAGAGTGGAAAGGAGAGGAAGGAAAAGAAAGAGA
GGGAGAGGAAGAAGTGCGATGGGACCGGAAGAAGTGGGGGAGAAGAAGGC
GTCGTCATTTAGTAAGTTGGTGCACAATATCGCAAGAGGTGCGACAGCGA
AAAACTAGCTGTAAAAGAGAGAGGGGGGGGATGTGGGGGAGAGAAAGAGT
CGCAGGGAGGGAAGGAGGAGAAGTACATATTTTTTGTGGGCAAAACGAAG
AAGAGGTAAAGGATGGACGGGAAAAAGTAGAGGCGAAGATGGTCATGAAA
ACGAAGAAAAATCAAGCAAAGAAGGCCAAGAACAAAAAAGATAGGAGGAA
GGTGAGGAG
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protein sequence of NO12G02850.1

>NO12G02850.1-protein ID=NO12G02850.1-protein|Name=NO12G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=840bp
MAKKKDTARQAMPSSRRTEEVPVMEDPRFSSMHSAPTFQRIPKDDRKFKI
DPRFKAVLTDDRFRAVDGGKVDKRGKKMKKREKVVDDFKAFYTVDGEEGG
DQSAKKMGKGDEEEKEGFTRRGRKKGERKQSKEAQPDPRFQLRPEQQDDE
KEEEEKDKEKKEEEEEEEEEECGDDGAEGKKKDDKMKKKSSPSHNEDEDR
LEYLNRLARGEISDASTSSSTGTSSSSSSSENDSSGFESEDEEPQADDDD
DDDDVIESRKLDEAPIPMGEATSRIAIMNCDWEHLKALDILGILLSFKPG
EGKVERVRVYVSDYGKEKMEEDAKRGPGFMLKEGGPGEGRKEQEAHEEDK
ECEDEGSVGSEEEDEEEGGEEVNQEMMRAYEVQKLRYYFAVAECDSVNTA
SKLYDEVDSLEFENSSSQIDVRFVPPDVEFEGREVRDEASGGSLPVTYEP
PVFVTKALQQTKVECTWEAGDGERERKLTQYHKWHEMDEDDLGAYLASSS
SEEEEEEEEEEEEEEEEEEGGKKQKGRKDERRKKLRNLLLGGLVGEEEEE
EEEEEEGGREGGGFKEVTYVPGKLAKSKWEKRKKEEEEEKEREEETPFEA
LLRKRKEKRKEKRAMKKEEKRGGRGGRGDEGEGGGGEEEEEEDDFFAEGI
RDGKNDKKNKRNKKGKRAEDEKEEDEEDEEEEGPAARKRKEEELELLFAG
EDKEEQLRDFDMRALERKERLKGKKLKGKRKRKEEKRGEVMPGGGFEVDV
QDERFSALFEGDARYGIDRTNKEYKQTEGMAVIMGEQSKRRRMKERGGGA
EERRRAEVESGKERKEKKERERKKCDGTGRSGGEEGVVI*
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Synonyms
Publications